Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00634 TTGAGAGAGATGGCTATGGCGGTGGCCCATCAAAGGGAGAGCAGTAGTGGAAGCATAACTAAACACCTGGATAGCTCTGGAAAGTACGTTCGGTACACCGCCGAGCAGGTCGAAGCTCTCGAGCGAGTCTACGCTGAGTGTCCCAAGCCAAGCTCTCTACGCAGGCAACAGTTGATCCGAGAATGTCCAATTCTTGCCAACATCGAACCCAAACAGATCAAAGTCTGGTTTCAAAATCGCAGGTGCAGAGAAAAGCAGAGAAAGGAGTCCTCTAGGCTACAAACAGTGAACCGGAAATTGACAGCAATGAACAAGCTGTTGATGGAGGAGAATGATCGCTTGCAGAAACAAGTGTCACAGCTCGTCTGTGAAAATGGGTTCATGAAGCAGCAATTGCATACACCATCTGGTGCAGCTGCTGATGCTAGCTGTGACTCTGTGGTTACCACTCCTCAGCATACTCTCAGAGATGCCAATAATCCTGCTGGACTCCTCTCCATTGCAGATGAGATCTTGGCAGAGTTTCTTTCAAAGGCTACAGGAACTGCGGTCGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATCTTTGCGATTTCTCAACGCTGTAGTGGAGTGGCAGCTCGAGCCTGTGGTCTAGTTAGTTTAGAACCTACAAAGGTAGGAGTTTTAATCAAGATGTTTTATCTTTGGAGTCTCAATTTTGATGTAACTAAGGTTAAGACGGTTCTTCAGATTGCAGAGATCCTCAAAGATAAACCATCCTGGTTTCGGCAATGTCGGAACCTTGAAGTCTTCACCATGTTTCCTGCTGGAAACGGCGGAACTATTGAGCTTGTTTACACACAGGTTTTTGCCCCTACTACGCTGGCTCCTGCTCGGGATTTCTGGACGCTCCGATTCACTTCGACATTAGATAATGGAAGCATTGTGGTCTGTGAGAGATCCCTTTCGGGATCTGGTGCTGGCCCGAATACAGCCTCTGCATCTCAGTTTGTGCGAGCCGAGATGCTTCCGAGTGGCTATCTGATTCGCCCTTGTGAGGGTGGAGGGTCGATAATACATATTGTTGACCATCTAAATCTTGAGGCATGGAGTGTGCCAGAGGTGCTTCGGCCACTTTATGAATCTTCGAAAGCAGTGGCTCAGAAATTAACTATAGCTGCATTGCGGTATGTCAGACAAATAGCTCAGGAGACTAGTGGAGAGGTTGCATATGGTTTGGGAAGGCAGCCAGCGGTTCTTCGAACGTTTAGCCATAGATTGAGCCGTGGCTTTAATGATGCTGTGAATGGATTTAACGACGATGGATGGTCATTAATTAATTGCGATGGGGCCGAAGATGTAATACTTGCCGTGAACTCAGCCAAGAATACAAGCTCGAGTTCTAATTCTTCGAATTCTCTAGCTTTTCTCGGAGGAATTCTTTGCGCGAAGGCATCGATGCTTCTCAAAAATGTTCCTCCAGCGGTGCTTGTTCGGTTCTTGAGAGAGCACCGCTCAGAATGGGCCGATTTTAACGTCGATGCTTATTCGGCATCTTCATTGAAAGCTGGCTCTTATCCCTATCCTGGTATCCGACCAATTAGGTTTACTGGAAGTCAAATTATAATGCCGCTTGGTCATACTATCGAACAAGAAGAGTTGCTTGAAGTTGTTCGGCTCGAAGGTCACTCTCTTGCTCCTGAAGATGCGTTTGTATCGAGGGACATTCACCTTTTGCAGATTTGTAGTGGCATTGATGAGAATGCCGTGGGATCTTCGTCGGAACTGATTTTCGCCCCGATCGATGAAATGTTTCCCGATGATGCTCCTCTGCTCCCTTCCGGTTTCAGAATCATTCCTCTCGATCCAAAAACAGATGACACGAAGGATTTACTGGCCGCACATCGGACCCTTGATTTGGCTTCCAGTCTCGAAGTCGGAACGATCAGTGGAGATGCATCGTCATCTCAGAATTCACGATCTGTTTTGACCATTGCTTTTCAGTTTCCTTTTGAGACGAGCCTTCAGAATAATGTTGCAGCCGTGGCTCGACAGTACGTACGAAGTGTGATATCTTCAGTTCAGAGGGTTGCTGTTGCCATTTCTCCATCCGGGCTTGGTCCCGCGCTCGGACCGAAGATTTCTACTGGCTCTCCCGAGGCTCATACTCTAGCACACTGGATCTGCCAAAGCTATAGTTACCATATTGGAGCGGATTTGCTGCGATCAGAGTCGGACGGTGGAGAGGCCGTACTAAAACATCTATGGAATCATCAAGATGCAATTTTGTGCTGTTCATTGAAGTCGCTGCCGGTTTTCACGTTCGCCAACCAAGCGGGCCTTGACATGCTCGAGACAACTCTAGTCGCGCTACAAGACATCTCCTTAGAAAAAATTTTCGACGCATCAGGACGGAAGACTTTATGTTCAGAATTTTCCAAGTTAATGCAGCAGGGATTCGTTTACTTGCCGGCCGGAATTTGCATGTCGACGATGGGGCGGCACGTTACGTTCGAGCAAGCTGTTGCTTGGAAAGTGATTGCCGCCGAAGATAATACTGTTCATTGCTTAGCCTTCTCTTTCGCAAACTGGTCTTTTGTTTGA 2604 47.77 LREMAMAVAHQRESSSGSITKHLDSSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECPILANIEPKQIKVWFQNRRCREKQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGFMKQQLHTPSGAAADASCDSVVTTPQHTLRDANNPAGLLSIADEILAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQRCSGVAARACGLVSLEPTKVGVLIKMFYLWSLNFDVTKVKTVLQIAEILKDKPSWFRQCRNLEVFTMFPAGNGGTIELVYTQVFAPTTLAPARDFWTLRFTSTLDNGSIVVCERSLSGSGAGPNTASASQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKAVAQKLTIAALRYVRQIAQETSGEVAYGLGRQPAVLRTFSHRLSRGFNDAVNGFNDDGWSLINCDGAEDVILAVNSAKNTSSSSNSSNSLAFLGGILCAKASMLLKNVPPAVLVRFLREHRSEWADFNVDAYSASSLKAGSYPYPGIRPIRFTGSQIIMPLGHTIEQEELLEVVRLEGHSLAPEDAFVSRDIHLLQICSGIDENAVGSSSELIFAPIDEMFPDDAPLLPSGFRIIPLDPKTDDTKDLLAAHRTLDLASSLEVGTISGDASSSQNSRSVLTIAFQFPFETSLQNNVAAVARQYVRSVISSVQRVAVAISPSGLGPALGPKISTGSPEAHTLAHWICQSYSYHIGADLLRSESDGGEAVLKHLWNHQDAILCCSLKSLPVFTFANQAGLDMLETTLVALQDISLEKIFDASGRKTLCSEFSKLMQQGFVYLPAGICMSTMGRHVTFEQAVAWKVIAAEDNTVHCLAFSFANWSFV 867
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7665365 7670503 + Bda025761.1 Bda07g00634 9524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00634 867 Gene3D - 21 94 - -
Bda07g00634 867 Coils Coil 97 124 - -
Bda07g00634 867 SMART START_1 166 401 IPR002913 GO:0008289
Bda07g00634 867 SUPERFAMILY Homeodomain-like 24 89 IPR009057 -
Bda07g00634 867 SUPERFAMILY Bet v1-like 166 403 - -
Bda07g00634 867 ProSiteProfiles START domain profile. 157 410 IPR002913 GO:0008289
Bda07g00634 867 Pfam MEKHLA domain 723 866 IPR013978 -
Bda07g00634 867 Gene3D - 225 407 IPR023393 -
Bda07g00634 867 CDD homeodomain 28 88 IPR001356 GO:0003677
Bda07g00634 867 ProSiteProfiles 'Homeobox' domain profile. 23 87 IPR001356 GO:0003677
Bda07g00634 867 Pfam START domain 247 400 IPR002913 GO:0008289
Bda07g00634 867 Pfam START domain 167 245 IPR002913 GO:0008289
Bda07g00634 867 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 4 867 IPR044830 GO:0003700
Bda07g00634 867 CDD bZIP 80 119 - -
Bda07g00634 867 Pfam Homeodomain 28 86 IPR001356 GO:0003677
Bda07g00634 867 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA 4 867 - -
Bda07g00634 867 SMART HOX_1 25 91 IPR001356 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00634 Bda-Chr7:7665365 Bda09g01188 Bda-Chr9:42819141 0 dispersed
Bda07g00634 Bda-Chr7:7665365 Bda02g00472 Bda-Chr2:45621679 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16117 PF01852 START 6.50E-32 CL0209 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00634 K09338 - qsu:112038274 1435.24