Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00643 ATGGAGATATCTGGGTATGGCCGCGACGGCGTTTACAGGTCTCTCAGACCCGCACTTTCCGTTCCCCAAGACCCTGACCTGTCTATGGTCTCCTTCCTCTTCAGAAACTCCTCTTCTTACCCACACAAACCCGCCCTGATCGACGCCGATTGTTCTGAGACCCTCTCATTTTCCCAGCTTAAATCCATGGTGATTAAGGTCTCCCATGGCTTACTTCATCTGGGTATTAAGAAGAACGACGTTGTTCTGATTTTCGCTCCCAATTCAATCCAATTTCCGATCTGTTTCCTCGGAATTATAGCCCTCGGAGCTATTGCGACCACTTGTAATCCGACTTACACAGTCTCTGAACTGACAAAGCAAACCAAAGATTCGAAACCGAAGCTTGTAATCACCGTCGCTGAGTTATGGGACAAAGCGATGAATTTGAATCTCCCGACAGTGTTGCTCGGACCAGAAGGATCGTCGCCGCCGTCGATGGATTCGACGATACTAAAATTCCGCGACTTGGTTCAATCCGGACGGTCGGAGACCCATTTTCCGGCGGTGAAAGTGAAGCAAACGGACACAGCCGTCCTTCTGTACTCATCGGGAACAACAGGTACGAGTAAGGGCGTGATTCTCTCTCACAGAAATTTTATAGCGGCGTCTCTAATGATCACACAGGACCAACAAATGGCGGGAGAAATGCACAACGTTTATCTCAATGTTTTGCCTCTTTTCCATGTTTTTGGACTGTCTTGTGTTACCTTTGCACAGCTTCAGATAGGCAATCCGATCGTGTTAATGTCTAAATTCGATTTAGAAAAGTTTATGTCGGCCATCGAGAAGTATAAGGTTACTGATATGTGGGTTGTGCCTCCAATCGTGCTGGCTTTGGCCAAGCAAAAGGTGGTTAAAAAGTATAATATTTCCTCGTTGAGACATATCGGTTCCGGGGCTGCACCTTTGGGCAAAGACTTAATGGACGAGTGTGCTAAGAACATTCCTAGTGCTCGGGTTATTCAGGGATATGGTATGACCGAAACTTGCGGAATTATTTCGTTGGAGAACCCGAGAGTGGGAGTTCGAAATGCGGGTACGGCTGGAAAACTTGCCGGAGGAGTTGAGGCTCAAATTATCAGTGTTGATACATTGAAGCCTCTCCCTCCTAATCAAACTGGAGAGATATGGGTTAGAGGGCCTAATATGATGCAAGGTTATTTCAACAATCCTCAGGCCACGATCCAGACCATTGATCAAAGTGGCTGGGTACACACAGGAGATCTCGGATATTTTGACGAAAGTGGACGTCTCTTTGTCGTGGATCGAATCAAAGAGCTTATCAAGTTCAAAGGTTTTCAGATTGCACCGGCCGAGCTCGAAGGGCTGCTAGTTTCTCACCCGGAAATATTAGATTCTGTTGTCATCCCATTCCCTGACGCTGAAGCAGGCGAGGTCCCTATCGCATTCGTAGTTCGCTCTCCGAATAGTTCACTCACAGAAGAAGACATAATCAAATTCATTTCCAAACAGTCCGTGAAAGCAGAGAGCGAGGCAAACAAATTAACAGTAGTGGGAAAAGTAGACCCATTAAAGCTTCGAGATAAGCTCGCTACCAAAACCAAGAAGAAGGTCGAACTGATTTCTCCAATACCAAAAAAGGAAAAGGAATCCAAACCCAAACCCGACGACAACAAACCAGACGAGAAGAAGAAACCCAACGAGTTAACGGAGCAGGTACCATTGACGATGGCGGTTCTGAAGGTGGGTTTTCACTGTCAGGGATGTATCGAGAAGATTCACAAGCTCATTTCCAAAACGAAAGGAGTTCAGGAAATGTCGATGGATAAAGAGAAGGAACTGGTGACCGTAAAAGGCACCATGGACGTGAAAGCTCTGTGCGAAAGTTTAAAGGAGAGAGTGAAGCGGCCAGTGGAAGTCGTCCCGCCGAAGAAGGAGAAGGAAAAGGAGAAAGAGAAAGAGGGCGGAGAGAAGAGAGACGGCGGGGTTGGGAAGAAAAAGGGTGGTGGAGGAGGCGGAGAAAAGGCGGAAGAGGGCGTCGGAAAGATGGAAGGGAACCGGATGGAGGTAATGACAGTACCGGGGTACGGATACGGGTACGGATACGGGTTAATGCAAGGGTATGAGTACGGGTACGGGGGAGGGGAGTATATTCATCATCATCATGATGCACCTCAGACTTTTAGTGACGAGAACCCAAATGCTTGCTCAATTATGTGA 2223 47.41 MEISGYGRDGVYRSLRPALSVPQDPDLSMVSFLFRNSSSYPHKPALIDADCSETLSFSQLKSMVIKVSHGLLHLGIKKNDVVLIFAPNSIQFPICFLGIIALGAIATTCNPTYTVSELTKQTKDSKPKLVITVAELWDKAMNLNLPTVLLGPEGSSPPSMDSTILKFRDLVQSGRSETHFPAVKVKQTDTAVLLYSSGTTGTSKGVILSHRNFIAASLMITQDQQMAGEMHNVYLNVLPLFHVFGLSCVTFAQLQIGNPIVLMSKFDLEKFMSAIEKYKVTDMWVVPPIVLALAKQKVVKKYNISSLRHIGSGAAPLGKDLMDECAKNIPSARVIQGYGMTETCGIISLENPRVGVRNAGTAGKLAGGVEAQIISVDTLKPLPPNQTGEIWVRGPNMMQGYFNNPQATIQTIDQSGWVHTGDLGYFDESGRLFVVDRIKELIKFKGFQIAPAELEGLLVSHPEILDSVVIPFPDAEAGEVPIAFVVRSPNSSLTEEDIIKFISKQSVKAESEANKLTVVGKVDPLKLRDKLATKTKKKVELISPIPKKEKESKPKPDDNKPDEKKKPNELTEQVPLTMAVLKVGFHCQGCIEKIHKLISKTKGVQEMSMDKEKELVTVKGTMDVKALCESLKERVKRPVEVVPPKKEKEKEKEKEGGEKRDGGVGKKKGGGGGGEKAEEGVGKMEGNRMEVMTVPGYGYGYGYGLMQGYEYGYGGGEYIHHHHDAPQTFSDENPNACSIM 740
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7773464 7784692 - Bda025771.2 Bda07g00643 9533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00643 740 MobiDBLite consensus disorder prediction 542 570 - -
Bda07g00643 740 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 4 508 - -
Bda07g00643 740 CDD 4CL 21 505 - -
Bda07g00643 740 Gene3D - 9 439 IPR042099 -
Bda07g00643 740 Gene3D - 577 649 - -
Bda07g00643 740 SUPERFAMILY Acetyl-CoA synthetase-like 22 535 - -
Bda07g00643 740 Gene3D - 440 551 IPR045851 -
Bda07g00643 740 MobiDBLite consensus disorder prediction 542 571 - -
Bda07g00643 740 SUPERFAMILY HMA, heavy metal-associated domain 576 633 IPR036163 GO:0046872
Bda07g00643 740 MobiDBLite consensus disorder prediction 639 681 - -
Bda07g00643 740 Pfam AMP-binding enzyme C-terminal domain 453 505 IPR025110 -
Bda07g00643 740 Pfam AMP-binding enzyme 35 444 IPR000873 -
Bda07g00643 740 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
Bda07g00643 740 ProSiteProfiles Heavy-metal-associated domain profile. 577 633 IPR006121 GO:0046872
Bda07g00643 740 CDD HMA 580 633 IPR006121 GO:0046872
Bda07g00643 740 Pfam Heavy-metal-associated domain 581 636 IPR006121 GO:0046872
Bda07g00643 740 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 4 508 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00643 Bda-Chr7:7773464 Bda01g01926 Bda-Chr1:55508683 3.28E-122 dispersed
Bda02g00476 Bda-Chr2:45654363 Bda07g00643 Bda-Chr7:7773464 9.30E-34 transposed
Bda03g01713 Bda-Chr3:56597464 Bda07g00643 Bda-Chr7:7773464 0 transposed
Bda04g01090 Bda-Chr4:61890511 Bda07g00643 Bda-Chr7:7773464 1.83E-36 transposed
Bda07g00066 Bda-Chr7:900180 Bda07g00643 Bda-Chr7:7773464 9.58E-124 transposed
Bda08g01177 Bda-Chr8:47204989 Bda07g00643 Bda-Chr7:7773464 1.29E-130 transposed
Bda11g01605 Bda-Chr11:49672773 Bda07g00643 Bda-Chr7:7773464 5.24E-119 transposed
Bda01g00307 Bda-Chr1:28080805 Bda07g00643 Bda-Chr7:7773464 8.62E-27 wgd
Bda05g01220 Bda-Chr5:60116489 Bda07g00643 Bda-Chr7:7773464 1.14E-26 wgd
Bda07g00643 Bda-Chr7:7773464 Bda09g00213 Bda-Chr9:3006493 1.36E-26 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00643 K01904 - zju:107411478 768.074