Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00658 ATGCCTCGACGTGGAGGCGGTAGTCGTGGAGGCGGTCGCCGGGGAGTCCATTCCCATCGCGATCAACCGTCTTCTGCGATGAATCAGTCGGCCGGTTATCAAATTGGAAGAGGAAGCGCTACTGGAATATCCGTCGATAGTCGTGGTGCTTCTTCTAGTGTAAGTGGAAGCAGTGTTGGAGAAACTTCAGGCAGTAGTGGTGGGAGTCATGTGAAACGACCTTCTCAATCTGTTGTTGTTACTGCTTCTAAGGAATCTCCCACTGTGCCTGCCTTGAGATCTGAGGCTTCTTCTTCACGTCCGCAAACGTCCACAGATCCTGTTGAAATGAATTTGCTGATTAGAAAAGTTGAAAAGGCTACATTGCTGCCGGATCCACCACCTCCGGTTTCTTCCAAGGCTCTGAGCCTTCCAAGAAGACCGGGATATGGTACCTTGGGCAAAAAGATAGTTGTCCGAGCAAATCATTTTCTCGTGGAAGTTTCTGACAAAGATATCTATCATTACGATGTGTCAATCAAACCAGAAATTTTGTCAAAGAAGGTATGTAGATCCGTCATTAAGCGCCTCGAAGATATATACAAGGAGTCACACTTGAACAAAAGAATGCTGGCTTATGATGGAAGCAAAAGCCTATATACAGCCGGGGCGCTTCCATTTCAATCTAAGGAATTAATAGTTGAGTTACCTGACAATCGATCTGAAGCTTCTACTTCTACAAGAAGAGAACGCAAATTCACTGTGACAATTAACTATGCTTCAAAACCAGATATACATCATCTACAACAGTTTATTCGCGGTAGACAGTTGGATGTTCCTCAAGAAACAATACAAATGCTTGATGTTGTCCTAAGAGCATCACCATCTGCAGACTATACAGTTGTTGGTCGATCCTTTTTCTCATTACAATTGGGACCTAAGGGTGAACTTGGGGATGGAGTGGAATATTGGAAGGGCTATTATCAGAGCCTTCGACCAACCCAGATGGGACTGTCCCTAAACATAGATGTCTCGGCACGGTCCTTCTACGAACAAATCCTGGTGACGGAGTTTGTTGCGAAATATATTAATCTTAGAGATTTTTCGAGGCCATTATCTGACCAAGAACGTCTTAAGATTAAAAAAGCTCTTAGAGGAATTAAGGTGCGAATCACTTACAGCGAATATGCAAGAACATATAAAGTTACTGGAATCACCGCACAATCAATTAGCCAACTCGGTGGTGATCTATTAATCAACTTCGAAATGTGTGAGCATCTTCAGCTGATTCACCTTATCTCTTTTATGGGCTATTGTTATTTTTTATTTCTATGTGAGATTGTTGGTGGGCAAAGATATACGAAGAAGTTAAATGAACGCCAAGTTACTGCTCTTTTAAGAGCAACATGTCAGCGCCCACCACAACGGGAAGATGGTATAAAGAAGATAGTTGAGAGTAATAAGTACGGAGAAGACAAGCTTGTCAGTAAAGAGTTTGAGATTAAAGTGAGAGAAGACCTGACTTCCATAGATGCTCGTGTCCTACCTTCTCCAATGCTTAAATATCATGACACAGGTAAAGAAACACGAGTAGACCCTAAGATGGGGCAATGGAATATGATCAACAAGAAAATGGTAAACGGAGGTAAAGTAGAGTGGTGGACTTGTGTAAACTTCTCTTCACGTGTAAATAGAAACTTGCCATTCGATTTCTGTCAGCAATTGATAGGGATGTGCAATAGTAAAGGAATGGATTTCAACTCAAGTCCATTGATTCCAATAACATCTGCCCAGTCTTCTCAAATTGAAAGGACACTTGGAGAAGTTAACAAAAAATCACAAGAAAAACTGAAAAATCTAAAGCGGGATGGTGATCGTTTACAACTGTTAATTATTATTTTACCTGATTTTAGTGGATCTTATGGAAAGATAAAACGTGTGTGTGAAACTGAACTCGGAATAGTTTCTCAATGTTGTCAACCAAAGCAAGCCTCAAAGATGAGTGTACAGTATTTTGAAAATGTTGCACTTAAAATCAATGTGAAGGTTGGAGGAAGAAATAGTGTATTAAATGATGCAATTCTCAGAAAAATTCCTTTTGTTTCTGATATGCCGACGATTGTCTTTGGTGCTGATGTGACGCATCCCATGCCAGGGGAAGACTCGAGCCCGTCCATAGCAGCTGTCGTCGCCTCCATGGATTGGCCGGAAGTTACCAAGTATAAAGGACTAATTTCTTCTCAATCACATCGGGAAGAAATTATTCAAGATCTATACAAGTTAGTCCCAGATCCTCAACGAGGACTAGTGCATGGTGGAATGATCAGGGAACTTTTGGTCTCTTTTTATAAATCTACTGGTCTAAAGCCCCACAGAATTATATTTTACAGAGATGGAGTAAGTGAAGGTCAATTCAATCAGGTTTTGTTATATGAGATGGATGCCATCCGAAAGGCATGTGCCGCACTACAGGAAGGTTATCAACCTCCAGTTACTTTTATTGTGGTGCAAAAGAGACATCATACAAGACTATTTCCAGCTGATAATCGCAACCTTGATCGAAGTGGAAATATACTACCAGGCACCGTCGTAGACACAAAAATTTGTCATCCCACGGAATTTGATTTTTACCTCAACAGCCATGCTGGCATTCAGGGAACAAGCCGACCAGCACATTATCATGTGTTGTACGACGAGAACAAATTTACTGCAGATTCGCTGCAATTGCTAACTAATAACTTGTGTTACACGTATTCAAGGTGCACTAAATCTGTTTCCATAGTGCCTCCAGCTTATTATGCGCATTTAGTCGCTTTCAGAGCACGATATTATATCGAGGGGGAGTTTTCCGAAAGTGGGTCAACAAGCGAAGGCAGGAGTGGGGAGGTCCGGCCTCTCCCTGTCGTCAAGGACAACGTGAAAGAAGTGATGTTCTATTGCTGA 2922 41.82 MPRRGGGSRGGGRRGVHSHRDQPSSAMNQSAGYQIGRGSATGISVDSRGASSSVSGSSVGETSGSSGGSHVKRPSQSVVVTASKESPTVPALRSEASSSRPQTSTDPVEMNLLIRKVEKATLLPDPPPPVSSKALSLPRRPGYGTLGKKIVVRANHFLVEVSDKDIYHYDVSIKPEILSKKVCRSVIKRLEDIYKESHLNKRMLAYDGSKSLYTAGALPFQSKELIVELPDNRSEASTSTRRERKFTVTINYASKPDIHHLQQFIRGRQLDVPQETIQMLDVVLRASPSADYTVVGRSFFSLQLGPKGELGDGVEYWKGYYQSLRPTQMGLSLNIDVSARSFYEQILVTEFVAKYINLRDFSRPLSDQERLKIKKALRGIKVRITYSEYARTYKVTGITAQSISQLGGDLLINFEMCEHLQLIHLISFMGYCYFLFLCEIVGGQRYTKKLNERQVTALLRATCQRPPQREDGIKKIVESNKYGEDKLVSKEFEIKVREDLTSIDARVLPSPMLKYHDTGKETRVDPKMGQWNMINKKMVNGGKVEWWTCVNFSSRVNRNLPFDFCQQLIGMCNSKGMDFNSSPLIPITSAQSSQIERTLGEVNKKSQEKLKNLKRDGDRLQLLIIILPDFSGSYGKIKRVCETELGIVSQCCQPKQASKMSVQYFENVALKINVKVGGRNSVLNDAILRKIPFVSDMPTIVFGADVTHPMPGEDSSPSIAAVVASMDWPEVTKYKGLISSQSHREEIIQDLYKLVPDPQRGLVHGGMIRELLVSFYKSTGLKPHRIIFYRDGVSEGQFNQVLLYEMDAIRKACAALQEGYQPPVTFIVVQKRHHTRLFPADNRNLDRSGNILPGTVVDTKICHPTEFDFYLNSHAGIQGTSRPAHYHVLYDENKFTADSLQLLTNNLCYTYSRCTKSVSIVPPAYYAHLVAFRARYYIEGEFSESGSTSEGRSGEVRPLPVVKDNVKEVMFYC 973
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7894110 7899489 + Bda025788.1 Bda07g00658 9548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00658 973 Gene3D - 507 685 - -
Bda07g00658 973 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 437 957 - -
Bda07g00658 973 PANTHER ARGONAUTE1 52 406 - -
Bda07g00658 973 CDD Piwi_ago-like 490 938 IPR045246 -
Bda07g00658 973 Gene3D paz domain 340 410 - -
Bda07g00658 973 SMART Piwi_a_2 622 939 IPR003165 GO:0003676
Bda07g00658 973 SUPERFAMILY Ribonuclease H-like 610 939 IPR012337 -
Bda07g00658 973 Pfam Argonaute linker 1 domain 295 344 IPR014811 -
Bda07g00658 973 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 52 406 - -
Bda07g00658 973 MobiDBLite consensus disorder prediction 21 108 - -
Bda07g00658 973 PANTHER ARGONAUTE1 437 957 - -
Bda07g00658 973 Coils Coil 603 623 - -
Bda07g00658 973 Pfam Argonaute linker 2 domain 468 515 IPR032472 -
Bda07g00658 973 Pfam Mid domain of argonaute 526 604 IPR032473 -
Bda07g00658 973 SMART DUF1785_2 293 345 IPR014811 -
Bda07g00658 973 Pfam N-terminal domain of argonaute 148 284 IPR032474 -
Bda07g00658 973 MobiDBLite consensus disorder prediction 1 108 - -
Bda07g00658 973 Pfam Piwi domain 624 938 IPR003165 GO:0003676
Bda07g00658 973 ProSiteProfiles Piwi domain profile. 622 939 IPR003165 GO:0003676
Bda07g00658 973 Gene3D - 691 973 IPR036397 GO:0003676
Bda07g00658 973 SUPERFAMILY PAZ domain 149 480 IPR036085 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00658 Bda-Chr7:7894110 Bda11g00601 Bda-Chr11:6125664 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00658 K11593 - vvi:100258447 1178.7