Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda07g00669 | ATGAGCGCGTTGAGCAGGACTGTAGCAATCAATCCTAATTTACGATTCTGCCACTCCATTCAATCCTCGTCTCCTTCAAACACACGAGTTCTGGTTCTTCCCTCATTAATCCGCTCTCCGTGTTTGCAAAATTCCACCTCTCTTCCGATTTCCCGTAAATTCTATCTTTCTTTTCCTCTTGGTTCTTCGATCAGAGCTTCAATGGCTGCTTCTACTCCATCCATGGATGCAGAGACAAAGCGCTTCTCTGTTCTTTTCGTATGTCTTGGTAACATCTGTAGAAGTCCAGCTGCTGAAGGGGTCTTCACGGATTTGGTTAAGAAAAAGGGTTTAGATTCGAAATTTAGGATCGATTCTGCTGGGACAATTAATTATCATGAGGGAAATCAAGCTGATCCAAGAATGAGAGCTGCCTCCAAAAGGCGAGGAGTAGAAATAACATCCATATCAAGGCCAATTCGACCATCAGATTTTAGAGATTTTGATCTTATTCTCGCAATGGATAAGCAAAACAGAGAGGATATATTGGACGCTTTCAATCGATGGAAACTGAGAGATACCTTGTCTCCAGATGGACACAAAAAGGTGAAGTTAATGTGCTCCTATTGTAAGAAACATGATGAAACCGAAGTTCCAGACCCCTATTATGGCGGAGCAAAAGGCTTTGAGAAGGTTTTGGACATACTTGAAGATGCTTGTGAATCACTGTTAGAAAGCATTGAGGCAGAGAATACTACCCGTTTCGGCACTTAA | 753 | 42.23 | MSALSRTVAINPNLRFCHSIQSSSPSNTRVLVLPSLIRSPCLQNSTSLPISRKFYLSFPLGSSIRASMAASTPSMDAETKRFSVLFVCLGNICRSPAAEGVFTDLVKKKGLDSKFRIDSAGTINYHEGNQADPRMRAASKRRGVEITSISRPIRPSDFRDFDLILAMDKQNREDILDAFNRWKLRDTLSPDGHKKVKLMCSYCKKHDETEVPDPYYGGAKGFEKVLDILEDACESLLESIEAENTTRFGT | 250 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 7962156 | 7964123 | - | Bda025801.1 | Bda07g00669 | 9559 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda07g00669 | 250 | PRINTS | LMW phosphotyrosine protein phosphatase signature | 127 | 143 | IPR017867 | GO:0004725|GO:0006470 | |
Bda07g00669 | 250 | PRINTS | LMW phosphotyrosine protein phosphatase signature | 84 | 101 | IPR017867 | GO:0004725|GO:0006470 | |
Bda07g00669 | 250 | PRINTS | LMW phosphotyrosine protein phosphatase signature | 211 | 226 | IPR017867 | GO:0004725|GO:0006470 | |
Bda07g00669 | 250 | Gene3D | - | 65 | 245 | - | - | |
Bda07g00669 | 250 | Pfam | Low molecular weight phosphotyrosine protein phosphatase | 84 | 237 | IPR023485 | - | |
Bda07g00669 | 250 | SUPERFAMILY | Phosphotyrosine protein phosphatases I | 81 | 240 | IPR036196 | - | |
Bda07g00669 | 250 | SMART | LMWPc_2 | 82 | 239 | IPR023485 | - | |
Bda07g00669 | 250 | PANTHER | LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED | 11 | 245 | - | - | |
Bda07g00669 | 250 | CDD | LMWPTP | 83 | 238 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g00669 | Bda-Chr7:7962156 | Bda13g00948 | Bda-Chr13:11195690 | 3.66E-22 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda07g00669 | K25307 | - | zju:107410529 | 342.428 |