Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00669 ATGAGCGCGTTGAGCAGGACTGTAGCAATCAATCCTAATTTACGATTCTGCCACTCCATTCAATCCTCGTCTCCTTCAAACACACGAGTTCTGGTTCTTCCCTCATTAATCCGCTCTCCGTGTTTGCAAAATTCCACCTCTCTTCCGATTTCCCGTAAATTCTATCTTTCTTTTCCTCTTGGTTCTTCGATCAGAGCTTCAATGGCTGCTTCTACTCCATCCATGGATGCAGAGACAAAGCGCTTCTCTGTTCTTTTCGTATGTCTTGGTAACATCTGTAGAAGTCCAGCTGCTGAAGGGGTCTTCACGGATTTGGTTAAGAAAAAGGGTTTAGATTCGAAATTTAGGATCGATTCTGCTGGGACAATTAATTATCATGAGGGAAATCAAGCTGATCCAAGAATGAGAGCTGCCTCCAAAAGGCGAGGAGTAGAAATAACATCCATATCAAGGCCAATTCGACCATCAGATTTTAGAGATTTTGATCTTATTCTCGCAATGGATAAGCAAAACAGAGAGGATATATTGGACGCTTTCAATCGATGGAAACTGAGAGATACCTTGTCTCCAGATGGACACAAAAAGGTGAAGTTAATGTGCTCCTATTGTAAGAAACATGATGAAACCGAAGTTCCAGACCCCTATTATGGCGGAGCAAAAGGCTTTGAGAAGGTTTTGGACATACTTGAAGATGCTTGTGAATCACTGTTAGAAAGCATTGAGGCAGAGAATACTACCCGTTTCGGCACTTAA 753 42.23 MSALSRTVAINPNLRFCHSIQSSSPSNTRVLVLPSLIRSPCLQNSTSLPISRKFYLSFPLGSSIRASMAASTPSMDAETKRFSVLFVCLGNICRSPAAEGVFTDLVKKKGLDSKFRIDSAGTINYHEGNQADPRMRAASKRRGVEITSISRPIRPSDFRDFDLILAMDKQNREDILDAFNRWKLRDTLSPDGHKKVKLMCSYCKKHDETEVPDPYYGGAKGFEKVLDILEDACESLLESIEAENTTRFGT 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7962156 7964123 - Bda025801.1 Bda07g00669 9559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00669 250 PRINTS LMW phosphotyrosine protein phosphatase signature 127 143 IPR017867 GO:0004725|GO:0006470
Bda07g00669 250 PRINTS LMW phosphotyrosine protein phosphatase signature 84 101 IPR017867 GO:0004725|GO:0006470
Bda07g00669 250 PRINTS LMW phosphotyrosine protein phosphatase signature 211 226 IPR017867 GO:0004725|GO:0006470
Bda07g00669 250 Gene3D - 65 245 - -
Bda07g00669 250 Pfam Low molecular weight phosphotyrosine protein phosphatase 84 237 IPR023485 -
Bda07g00669 250 SUPERFAMILY Phosphotyrosine protein phosphatases I 81 240 IPR036196 -
Bda07g00669 250 SMART LMWPc_2 82 239 IPR023485 -
Bda07g00669 250 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 11 245 - -
Bda07g00669 250 CDD LMWPTP 83 238 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00669 Bda-Chr7:7962156 Bda13g00948 Bda-Chr13:11195690 3.66E-22 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00669 K25307 - zju:107410529 342.428