Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00678 ATGGCGGCCGAAAGAGTTGCGGGGACTGGTTTAGTAGAATCTGAACCTTCCGATCACCATTTTCCCCGTGCTGTTTTTTACGAAGTTGATGATACTTGCACAAGTTTCATTAATCAAGGGCCAAGTTTTGATTTTGGAGAGCTGGAAGAAGCAATTGTTCTGCAAGGAGTTGCGTTGAGAAATGATGAAGCCAGAGCATCTCTTTTCACAGGAAAGCCAGCTACTTTGGAAATTTTCCCTTCCTGGCCTATGAGATTCCAACCAAGCCATATAGCAGGGAGTTCAAAGTCAGGAGGGGAGAGCAGTGATTTGGGATCAGCTATGAACAAGCTCACTGCAAGCAAAGCTGAGGGCTACTCAGAACAAGAATCTCCGATGAGTAAAAAGTCGGCTTCCTCTTCAGATAATCAGGGTTTTGATCAGAATAAAACACAAACCCATCTTTTTAAACACCAAATTAATGGAAGAAAACGATGTTTTTCAAACTCATCAGACAACAATGAAACAGTTGATATTTACGCCATTTTTGTGTTATTCTCTGTTCAGAAGAAAGGAACCGGTTCAAAATCAGAGAAGCAACTCGATGCCAAGACGTCCAGACGTTTGGCTCAAAACAGAGCAGCAGCCAAAAAGAGTCGTCTCAGAAAAAAGGCTTACATACAGCAGCTGGAAGCAAGTAGAATGAAGCTTTCTCAGATTGAACAAGACCTCCGACGATCTCACTCTAAGCCTGAATTCAATGTTAATATTGTAGGAGGTGTAGTTTTCGACGTGGAATATACGAGATGGCTAGAGGACGATCGGAGGCAGATGACTGAGCTAAGATCAGGTTTGGAGGCGCACTTATCGGACGATGATCTCCAATCAACACTAGATGAGTACATTTCTCATTACGATGAAATTTTCCGGCTAAAAGGGGCGGTAGCCAAATCCGATGTCTTCCATCTGATCACCGGAATGTGGATAACTCCGGTCGAGAGATATTTTCTCTGGATGGGTGGCTTTAGACCCTCTGAACTCATCAAGATTTTAATATCACAACTAGACCCACTAAGCGAACAGCAAGCAATGGGAATATATAAGCTGCAAAATTCTACACAACAGGCAGAGGACGCTCTATCCCAAGGCCAAGAACAACTCCAGCAATCTCTGCTAGACACCATAGCCGGTGGGCCGATCATCAACGGCATGAACCAGATGTTGATGGCCGTCGGCAAGCTTTCCAATCTCGAAGGTTTAGTTCGACAGGCTGATATTTTGAGACAGCAAACACTTCATCAATTGTGTCGAATACTAACAACACGACAAGCCGCACAGTGTTTTGTTGTGATCGGAGAATATTACAGCAGGCTAAGAGCCCTCGGCTCTATATGGGCCGACTCGGCCTCGAGAGTATGA 1398 44.42 MAAERVAGTGLVESEPSDHHFPRAVFYEVDDTCTSFINQGPSFDFGELEEAIVLQGVALRNDEARASLFTGKPATLEIFPSWPMRFQPSHIAGSSKSGGESSDLGSAMNKLTASKAEGYSEQESPMSKKSASSSDNQGFDQNKTQTHLFKHQINGRKRCFSNSSDNNETVDIYAIFVLFSVQKKGTGSKSEKQLDAKTSRRLAQNRAAAKKSRLRKKAYIQQLEASRMKLSQIEQDLRRSHSKPEFNVNIVGGVVFDVEYTRWLEDDRRQMTELRSGLEAHLSDDDLQSTLDEYISHYDEIFRLKGAVAKSDVFHLITGMWITPVERYFLWMGGFRPSELIKILISQLDPLSEQQAMGIYKLQNSTQQAEDALSQGQEQLQQSLLDTIAGGPIINGMNQMLMAVGKLSNLEGLVRQADILRQQTLHQLCRILTTRQAAQCFVVIGEYYSRLRALGSIWADSASRV 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8066215 8068917 - Bda025811.3 Bda07g00678 9568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00678 465 MobiDBLite consensus disorder prediction 114 141 - -
Bda07g00678 465 PANTHER TRANSCRIPTION FACTOR TGA9 64 459 - -
Bda07g00678 465 PANTHER TRANSCRIPTION FACTOR TGA9 64 459 - -
Bda07g00678 465 Coils Coil 216 236 - -
Bda07g00678 465 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 200 215 IPR004827 GO:0003700|GO:0006355
Bda07g00678 465 SMART brlzneu 193 257 IPR004827 GO:0003700|GO:0006355
Bda07g00678 465 Pfam Seed dormancy control 270 345 IPR025422 GO:0006351|GO:0043565
Bda07g00678 465 Pfam bZIP transcription factor 196 239 IPR004827 GO:0003700|GO:0006355
Bda07g00678 465 Gene3D - 196 244 - -
Bda07g00678 465 ProSiteProfiles DOG1 domain profile. 253 461 IPR025422 GO:0006351|GO:0043565
Bda07g00678 465 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 195 239 IPR004827 GO:0003700|GO:0006355
Bda07g00678 465 SUPERFAMILY Leucine zipper domain 197 239 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01602 Bda-Chr3:55324750 Bda07g00678 Bda-Chr7:8066215 9.58E-89 dispersed
Bda05g01018 Bda-Chr5:58609526 Bda07g00678 Bda-Chr7:8066215 6.06E-109 dispersed
Bda07g00678 Bda-Chr7:8066215 Bda14g01022 Bda-Chr14:8625613 2.91E-77 dispersed
Bda11g01888 Bda-Chr11:53913625 Bda07g00678 Bda-Chr7:8066215 2.49E-74 dispersed
Bda02g00706 Bda-Chr2:47916989 Bda07g00678 Bda-Chr7:8066215 7.92E-18 wgd
Bda07g00678 Bda-Chr7:8066215 Bda09g00251 Bda-Chr9:3250373 4.06E-77 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16121 PF14144 DOG1 2.60E-29 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00678 K14431 - pop:7460056 533.487