Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda07g00678 | ATGGCGGCCGAAAGAGTTGCGGGGACTGGTTTAGTAGAATCTGAACCTTCCGATCACCATTTTCCCCGTGCTGTTTTTTACGAAGTTGATGATACTTGCACAAGTTTCATTAATCAAGGGCCAAGTTTTGATTTTGGAGAGCTGGAAGAAGCAATTGTTCTGCAAGGAGTTGCGTTGAGAAATGATGAAGCCAGAGCATCTCTTTTCACAGGAAAGCCAGCTACTTTGGAAATTTTCCCTTCCTGGCCTATGAGATTCCAACCAAGCCATATAGCAGGGAGTTCAAAGTCAGGAGGGGAGAGCAGTGATTTGGGATCAGCTATGAACAAGCTCACTGCAAGCAAAGCTGAGGGCTACTCAGAACAAGAATCTCCGATGAGTAAAAAGTCGGCTTCCTCTTCAGATAATCAGGGTTTTGATCAGAATAAAACACAAACCCATCTTTTTAAACACCAAATTAATGGAAGAAAACGATGTTTTTCAAACTCATCAGACAACAATGAAACAGTTGATATTTACGCCATTTTTGTGTTATTCTCTGTTCAGAAGAAAGGAACCGGTTCAAAATCAGAGAAGCAACTCGATGCCAAGACGTCCAGACGTTTGGCTCAAAACAGAGCAGCAGCCAAAAAGAGTCGTCTCAGAAAAAAGGCTTACATACAGCAGCTGGAAGCAAGTAGAATGAAGCTTTCTCAGATTGAACAAGACCTCCGACGATCTCACTCTAAGCCTGAATTCAATGTTAATATTGTAGGAGGTGTAGTTTTCGACGTGGAATATACGAGATGGCTAGAGGACGATCGGAGGCAGATGACTGAGCTAAGATCAGGTTTGGAGGCGCACTTATCGGACGATGATCTCCAATCAACACTAGATGAGTACATTTCTCATTACGATGAAATTTTCCGGCTAAAAGGGGCGGTAGCCAAATCCGATGTCTTCCATCTGATCACCGGAATGTGGATAACTCCGGTCGAGAGATATTTTCTCTGGATGGGTGGCTTTAGACCCTCTGAACTCATCAAGATTTTAATATCACAACTAGACCCACTAAGCGAACAGCAAGCAATGGGAATATATAAGCTGCAAAATTCTACACAACAGGCAGAGGACGCTCTATCCCAAGGCCAAGAACAACTCCAGCAATCTCTGCTAGACACCATAGCCGGTGGGCCGATCATCAACGGCATGAACCAGATGTTGATGGCCGTCGGCAAGCTTTCCAATCTCGAAGGTTTAGTTCGACAGGCTGATATTTTGAGACAGCAAACACTTCATCAATTGTGTCGAATACTAACAACACGACAAGCCGCACAGTGTTTTGTTGTGATCGGAGAATATTACAGCAGGCTAAGAGCCCTCGGCTCTATATGGGCCGACTCGGCCTCGAGAGTATGA | 1398 | 44.42 | MAAERVAGTGLVESEPSDHHFPRAVFYEVDDTCTSFINQGPSFDFGELEEAIVLQGVALRNDEARASLFTGKPATLEIFPSWPMRFQPSHIAGSSKSGGESSDLGSAMNKLTASKAEGYSEQESPMSKKSASSSDNQGFDQNKTQTHLFKHQINGRKRCFSNSSDNNETVDIYAIFVLFSVQKKGTGSKSEKQLDAKTSRRLAQNRAAAKKSRLRKKAYIQQLEASRMKLSQIEQDLRRSHSKPEFNVNIVGGVVFDVEYTRWLEDDRRQMTELRSGLEAHLSDDDLQSTLDEYISHYDEIFRLKGAVAKSDVFHLITGMWITPVERYFLWMGGFRPSELIKILISQLDPLSEQQAMGIYKLQNSTQQAEDALSQGQEQLQQSLLDTIAGGPIINGMNQMLMAVGKLSNLEGLVRQADILRQQTLHQLCRILTTRQAAQCFVVIGEYYSRLRALGSIWADSASRV | 465 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 8066215 | 8068917 | - | Bda025811.3 | Bda07g00678 | 9568 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda07g00678 | 465 | MobiDBLite | consensus disorder prediction | 114 | 141 | - | - | |
Bda07g00678 | 465 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 64 | 459 | - | - | |
Bda07g00678 | 465 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 64 | 459 | - | - | |
Bda07g00678 | 465 | Coils | Coil | 216 | 236 | - | - | |
Bda07g00678 | 465 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 200 | 215 | IPR004827 | GO:0003700|GO:0006355 | |
Bda07g00678 | 465 | SMART | brlzneu | 193 | 257 | IPR004827 | GO:0003700|GO:0006355 | |
Bda07g00678 | 465 | Pfam | Seed dormancy control | 270 | 345 | IPR025422 | GO:0006351|GO:0043565 | |
Bda07g00678 | 465 | Pfam | bZIP transcription factor | 196 | 239 | IPR004827 | GO:0003700|GO:0006355 | |
Bda07g00678 | 465 | Gene3D | - | 196 | 244 | - | - | |
Bda07g00678 | 465 | ProSiteProfiles | DOG1 domain profile. | 253 | 461 | IPR025422 | GO:0006351|GO:0043565 | |
Bda07g00678 | 465 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 195 | 239 | IPR004827 | GO:0003700|GO:0006355 | |
Bda07g00678 | 465 | SUPERFAMILY | Leucine zipper domain | 197 | 239 | IPR046347 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g01602 | Bda-Chr3:55324750 | Bda07g00678 | Bda-Chr7:8066215 | 9.58E-89 | dispersed | |
Bda05g01018 | Bda-Chr5:58609526 | Bda07g00678 | Bda-Chr7:8066215 | 6.06E-109 | dispersed | |
Bda07g00678 | Bda-Chr7:8066215 | Bda14g01022 | Bda-Chr14:8625613 | 2.91E-77 | dispersed | |
Bda11g01888 | Bda-Chr11:53913625 | Bda07g00678 | Bda-Chr7:8066215 | 2.49E-74 | dispersed | |
Bda02g00706 | Bda-Chr2:47916989 | Bda07g00678 | Bda-Chr7:8066215 | 7.92E-18 | wgd | |
Bda07g00678 | Bda-Chr7:8066215 | Bda09g00251 | Bda-Chr9:3250373 | 4.06E-77 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16121 | PF14144 | DOG1 | 2.60E-29 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda07g00678 | K14431 | - | pop:7460056 | 533.487 |