Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00726 ATGGCGATCCCAGATTACAAAACGGACCCGAAATTCGGAGATTTTTTACGTTCGGTTGATGCGTATTGTGCTACTCCGCCGAACAAACGGCCCCGGCACGAGAATTGCGACCCGTTCGGGAAATTCAAAGGCGTCGTTATGCAGCAAAACGGGCATTGGGGGGCACAAATTTACGCGAATCATCAGAGAATTTGGCTCGGAACGTTTAAGTCGGAGAAAGAGGCGGCGATGGCGTACGATAGTGCGGCCATAAAGCTCCGAAACGGAATCGACTCGCACCGGAATTTCCCTTGGACAGATCACAGCATGAAGGAGCCTAGTTTTCAAAACCAATTCAGCAAAGACGACGTGCTGAAAATGATCAGAGATGGTTCTTATTCTTCCAAGTTTGATGCATTTCTGACGGAAGAGTCTCGAACTGAGGAGATTGGATTGGGTTCGAAGCAAAGAACAGTGAATTTATGCGACGGAAAATGTTCAAAAATCAAACTTTTTCAGAAGGAGCTGACGCCAAGTGACGTCGGAAAGCTCAACAGGCTCGTAATCCCGAAGAAAAACGCGACGAAATATTTTCCGTTCATCCGCGAAAACGACGACAACGACGTCGAGCTAGCTTTCTACGATAAGTCGATGAAGGTTTGGAAATTCAGATACTGTTATTGGAAAAGTAGCCAGAGCTTCGTGTTCACGAGGGGCTGGAATAGATTTGTGAAGGAGAAGAAGTTGAAGGAGAACGACATAATATCGTTTTACTCGTGCGAAGAAGGCCAAAACAGCGAAGAAAATGGCTTCTCTTTCTGCTTGATCGACGTAGTTTACAGCAAAGCGAGAGAAACCGGAGCTGAAACCTGTTTGGCTGCCGAGAAAATTTGCAGCGAGACGAAGAACGTGGGATTGGAGCTGCACTTGGGGAATTTTCTCAGATTCAAACTGGACGGGAAAGAGAAGGAAAATGTTTTTGATGGGATGTATTCGATTCCAACTTGTGTTGAAGAGAAGGGTTTTAGGCTATTCGGAGTGCAAATCACCTGA 1032 46.12 MAIPDYKTDPKFGDFLRSVDAYCATPPNKRPRHENCDPFGKFKGVVMQQNGHWGAQIYANHQRIWLGTFKSEKEAAMAYDSAAIKLRNGIDSHRNFPWTDHSMKEPSFQNQFSKDDVLKMIRDGSYSSKFDAFLTEESRTEEIGLGSKQRTVNLCDGKCSKIKLFQKELTPSDVGKLNRLVIPKKNATKYFPFIRENDDNDVELAFYDKSMKVWKFRYCYWKSSQSFVFTRGWNRFVKEKKLKENDIISFYSCEEGQNSEENGFSFCLIDVVYSKARETGAETCLAAEKICSETKNVGLELHLGNFLRFKLDGKEKENVFDGMYSIPTCVEEKGFRLFGVQIT 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8559227 8560258 + Bda025861.1 Bda07g00726 9616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00726 343 ProSiteProfiles AP2/ERF domain profile. 41 97 IPR001471 GO:0003700|GO:0006355
Bda07g00726 343 SUPERFAMILY DNA-binding pseudobarrel domain 160 256 IPR015300 -
Bda07g00726 343 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 24 343 IPR044800 GO:0003700
Bda07g00726 343 SMART B3_2 165 261 IPR003340 GO:0003677
Bda07g00726 343 Gene3D - 159 275 IPR015300 -
Bda07g00726 343 CDD AP2 41 99 IPR001471 GO:0003700|GO:0006355
Bda07g00726 343 Pfam AP2 domain 41 88 IPR001471 GO:0003700|GO:0006355
Bda07g00726 343 Pfam B3 DNA binding domain 165 254 IPR003340 GO:0003677
Bda07g00726 343 CDD B3_DNA 163 251 IPR003340 GO:0003677
Bda07g00726 343 ProSiteProfiles B3 DNA-binding domain profile. 165 272 IPR003340 GO:0003677
Bda07g00726 343 PANTHER AP2/ERF AND B3 DOMAIN TRANSCRIPTION FACTOR 24 343 - -
Bda07g00726 343 Gene3D AP2/ERF domain 41 98 IPR036955 GO:0003700|GO:0006355
Bda07g00726 343 SMART rav1_2 41 103 IPR001471 GO:0003700|GO:0006355
Bda07g00726 343 SUPERFAMILY DNA-binding domain 41 98 IPR016177 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00726 Bda-Chr7:8559227 Bda10g01143 Bda-Chr10:45485378 1.18E-54 dispersed
Bda07g00726 Bda-Chr7:8559227 Bda07g01526 Bda-Chr7:28386869 5.37E-55 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16124 PF02362 B3 3.90E-25 CL0405 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00726 K09287 - qsu:111998385 365.925