Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00737 ATGAATGCAAATGACTGGCTTTCTTTCCCATTTTCACCAACTCAAACTTCTCAGTCCCTTCAATTCTCCCTAGGGCTAGTGAATGATCCAATGGAAAACCCATTTAACAGCCATGATTGGAATTTGATTACTAACCAAGGAGGAAATGAAGTTCCTAAGGTGGCTGATTTGCTTGGGGTTACCAAATCAGAAAGTCAATCAGATCTATCTGTTTTTAATGGGATTCAGCCGAATGATTCAGAGTATTTATATTCAAACAACAGCATAGTTCCTCTTCAAACCACCATGGCTGATTTCCAAGAAAGTTCTAACGACTTGCAGTCCTTGACTTTAAACAAGACTTCGACAAACTGTGAAAATAGTGGTGAAAACAGCAAAATCAGTACTGTCGGGGCAACTCCAAGAAGAACTATGGAGACTTTTGGGCAAAGAACCTCAATTTATCGTGGGGTTACAAGGCATCGATGGACAGGAAGATACGAAGCTCATCTTTGGGATAACAGTTGCAGAAGGGAAGGACAATCAAGAAAGGGTCGTCAAGGTGGGTATGACAAAGAAGATAAAGCAGCTAGGGCTTTTGATCTTGCAGCATTGAAATATTGGGGAACATCAACGACTACGAACTTTCCTGAAAGCGATTATGAAAGAGAATTGGAGGAGATGAAGAGCCTGACAAGACAAGAATTCGTGGCCTCCATTAGAAGGAAGAGTAGTGGGTTTTCTAGAGGTGCATCCATGCATCATCAACATGGAAAATGGCAGGCAAGAATCGGAAGAGTGGCAGGAAATAAAGATCTTTACTTGGGAACATTCAGTACCGAGGAAGAAGCCGCCGAAGCATACGACATTGCAGCCATAAAATTCCGAGGCCAAACTGCAGTGACAAACTTCGACATGAATCGATACGACTTAAAAAGCATTTTAGAAAGCAACTCTCTACCCATCGGAGGAGGAGCAGCAAAAAGATTGAAAGAAGTTCAGGCCATTGAATCGGCGAGAAAACGTGAAGAAATGATAGCTCTTGCTTCTAGCTTTCACTATGGTGCCTCTGGTGAATCTTCTGCTAGGGTTCCTCTTCAATCTTTTGACCACTCTTTTCCGTTGATTTCTCTGCAAAATCGAGAAATCTCTCATTTTTCTCAAGACCCATCATCGTTTCAGCAGAGTTATCTTCATCAACTTCACTTTCATCATCAGAATTCTGGTTTTCAGGCTAACCCATTAAGCCAAAGCCCTCAGTTCTTCGATGGGCATGATTCTGGATCATCGTCTTCGTCTGTAATCATGGAGAATAACACTGGAGGAGGACAATATAACCTAGAAAATGGAGGATATGGAGGTTGTTCCGCTGATCATCAGACTAACAACGGAGTTTTCAGTATGTGGAACGAAGGATGA 1398 42.06 MNANDWLSFPFSPTQTSQSLQFSLGLVNDPMENPFNSHDWNLITNQGGNEVPKVADLLGVTKSESQSDLSVFNGIQPNDSEYLYSNNSIVPLQTTMADFQESSNDLQSLTLNKTSTNCENSGENSKISTVGATPRRTMETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEDKAARAFDLAALKYWGTSTTTNFPESDYERELEEMKSLTRQEFVASIRRKSSGFSRGASMHHQHGKWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGQTAVTNFDMNRYDLKSILESNSLPIGGGAAKRLKEVQAIESARKREEMIALASSFHYGASGESSARVPLQSFDHSFPLISLQNREISHFSQDPSSFQQSYLHQLHFHHQNSGFQANPLSQSPQFFDGHDSGSSSSSVIMENNTGGGQYNLENGGYGGCSADHQTNNGVFSMWNEG 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8698315 8704809 - Bda025872.1 Bda07g00737 9627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00737 465 Pfam AP2 domain 247 290 IPR001471 GO:0003700|GO:0006355
Bda07g00737 465 Pfam AP2 domain 147 202 IPR001471 GO:0003700|GO:0006355
Bda07g00737 465 MobiDBLite consensus disorder prediction 402 435 - -
Bda07g00737 465 ProSiteProfiles AP2/ERF domain profile. 147 210 IPR001471 GO:0003700|GO:0006355
Bda07g00737 465 CDD AP2 146 212 IPR001471 GO:0003700|GO:0006355
Bda07g00737 465 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 5 448 - -
Bda07g00737 465 SUPERFAMILY DNA-binding domain 146 211 IPR016177 GO:0003677
Bda07g00737 465 SMART rav1_2 147 216 IPR001471 GO:0003700|GO:0006355
Bda07g00737 465 SMART rav1_2 242 304 IPR001471 GO:0003700|GO:0006355
Bda07g00737 465 ProSiteProfiles AP2/ERF domain profile. 240 298 IPR001471 GO:0003700|GO:0006355
Bda07g00737 465 CDD AP2 242 298 IPR001471 GO:0003700|GO:0006355
Bda07g00737 465 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 5 448 - -
Bda07g00737 465 PRINTS Ethylene responsive element binding protein signature 280 300 IPR001471 GO:0003700|GO:0006355
Bda07g00737 465 PRINTS Ethylene responsive element binding protein signature 148 159 IPR001471 GO:0003700|GO:0006355
Bda07g00737 465 Gene3D AP2/ERF domain 242 300 IPR036955 GO:0003700|GO:0006355
Bda07g00737 465 Gene3D AP2/ERF domain 147 211 IPR036955 GO:0003700|GO:0006355
Bda07g00737 465 SUPERFAMILY DNA-binding domain 242 299 IPR016177 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00737 Bda-Chr7:8698315 Bda09g00309 Bda-Chr9:3852688 0 dispersed
Bda07g00737 Bda-Chr7:8698315 Bda03g00160 Bda-Chr3:1319585 2.20E-94 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16127 PF00847 AP2 3.30E-07 CL0081 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00737 K09285 - pvy:116115844 592.423