Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda07g00737 | ATGAATGCAAATGACTGGCTTTCTTTCCCATTTTCACCAACTCAAACTTCTCAGTCCCTTCAATTCTCCCTAGGGCTAGTGAATGATCCAATGGAAAACCCATTTAACAGCCATGATTGGAATTTGATTACTAACCAAGGAGGAAATGAAGTTCCTAAGGTGGCTGATTTGCTTGGGGTTACCAAATCAGAAAGTCAATCAGATCTATCTGTTTTTAATGGGATTCAGCCGAATGATTCAGAGTATTTATATTCAAACAACAGCATAGTTCCTCTTCAAACCACCATGGCTGATTTCCAAGAAAGTTCTAACGACTTGCAGTCCTTGACTTTAAACAAGACTTCGACAAACTGTGAAAATAGTGGTGAAAACAGCAAAATCAGTACTGTCGGGGCAACTCCAAGAAGAACTATGGAGACTTTTGGGCAAAGAACCTCAATTTATCGTGGGGTTACAAGGCATCGATGGACAGGAAGATACGAAGCTCATCTTTGGGATAACAGTTGCAGAAGGGAAGGACAATCAAGAAAGGGTCGTCAAGGTGGGTATGACAAAGAAGATAAAGCAGCTAGGGCTTTTGATCTTGCAGCATTGAAATATTGGGGAACATCAACGACTACGAACTTTCCTGAAAGCGATTATGAAAGAGAATTGGAGGAGATGAAGAGCCTGACAAGACAAGAATTCGTGGCCTCCATTAGAAGGAAGAGTAGTGGGTTTTCTAGAGGTGCATCCATGCATCATCAACATGGAAAATGGCAGGCAAGAATCGGAAGAGTGGCAGGAAATAAAGATCTTTACTTGGGAACATTCAGTACCGAGGAAGAAGCCGCCGAAGCATACGACATTGCAGCCATAAAATTCCGAGGCCAAACTGCAGTGACAAACTTCGACATGAATCGATACGACTTAAAAAGCATTTTAGAAAGCAACTCTCTACCCATCGGAGGAGGAGCAGCAAAAAGATTGAAAGAAGTTCAGGCCATTGAATCGGCGAGAAAACGTGAAGAAATGATAGCTCTTGCTTCTAGCTTTCACTATGGTGCCTCTGGTGAATCTTCTGCTAGGGTTCCTCTTCAATCTTTTGACCACTCTTTTCCGTTGATTTCTCTGCAAAATCGAGAAATCTCTCATTTTTCTCAAGACCCATCATCGTTTCAGCAGAGTTATCTTCATCAACTTCACTTTCATCATCAGAATTCTGGTTTTCAGGCTAACCCATTAAGCCAAAGCCCTCAGTTCTTCGATGGGCATGATTCTGGATCATCGTCTTCGTCTGTAATCATGGAGAATAACACTGGAGGAGGACAATATAACCTAGAAAATGGAGGATATGGAGGTTGTTCCGCTGATCATCAGACTAACAACGGAGTTTTCAGTATGTGGAACGAAGGATGA | 1398 | 42.06 | MNANDWLSFPFSPTQTSQSLQFSLGLVNDPMENPFNSHDWNLITNQGGNEVPKVADLLGVTKSESQSDLSVFNGIQPNDSEYLYSNNSIVPLQTTMADFQESSNDLQSLTLNKTSTNCENSGENSKISTVGATPRRTMETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEDKAARAFDLAALKYWGTSTTTNFPESDYERELEEMKSLTRQEFVASIRRKSSGFSRGASMHHQHGKWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGQTAVTNFDMNRYDLKSILESNSLPIGGGAAKRLKEVQAIESARKREEMIALASSFHYGASGESSARVPLQSFDHSFPLISLQNREISHFSQDPSSFQQSYLHQLHFHHQNSGFQANPLSQSPQFFDGHDSGSSSSSVIMENNTGGGQYNLENGGYGGCSADHQTNNGVFSMWNEG | 465 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 8698315 | 8704809 | - | Bda025872.1 | Bda07g00737 | 9627 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda07g00737 | 465 | Pfam | AP2 domain | 247 | 290 | IPR001471 | GO:0003700|GO:0006355 | |
Bda07g00737 | 465 | Pfam | AP2 domain | 147 | 202 | IPR001471 | GO:0003700|GO:0006355 | |
Bda07g00737 | 465 | MobiDBLite | consensus disorder prediction | 402 | 435 | - | - | |
Bda07g00737 | 465 | ProSiteProfiles | AP2/ERF domain profile. | 147 | 210 | IPR001471 | GO:0003700|GO:0006355 | |
Bda07g00737 | 465 | CDD | AP2 | 146 | 212 | IPR001471 | GO:0003700|GO:0006355 | |
Bda07g00737 | 465 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 5 | 448 | - | - | |
Bda07g00737 | 465 | SUPERFAMILY | DNA-binding domain | 146 | 211 | IPR016177 | GO:0003677 | |
Bda07g00737 | 465 | SMART | rav1_2 | 147 | 216 | IPR001471 | GO:0003700|GO:0006355 | |
Bda07g00737 | 465 | SMART | rav1_2 | 242 | 304 | IPR001471 | GO:0003700|GO:0006355 | |
Bda07g00737 | 465 | ProSiteProfiles | AP2/ERF domain profile. | 240 | 298 | IPR001471 | GO:0003700|GO:0006355 | |
Bda07g00737 | 465 | CDD | AP2 | 242 | 298 | IPR001471 | GO:0003700|GO:0006355 | |
Bda07g00737 | 465 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 | 5 | 448 | - | - | |
Bda07g00737 | 465 | PRINTS | Ethylene responsive element binding protein signature | 280 | 300 | IPR001471 | GO:0003700|GO:0006355 | |
Bda07g00737 | 465 | PRINTS | Ethylene responsive element binding protein signature | 148 | 159 | IPR001471 | GO:0003700|GO:0006355 | |
Bda07g00737 | 465 | Gene3D | AP2/ERF domain | 242 | 300 | IPR036955 | GO:0003700|GO:0006355 | |
Bda07g00737 | 465 | Gene3D | AP2/ERF domain | 147 | 211 | IPR036955 | GO:0003700|GO:0006355 | |
Bda07g00737 | 465 | SUPERFAMILY | DNA-binding domain | 242 | 299 | IPR016177 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g00737 | Bda-Chr7:8698315 | Bda09g00309 | Bda-Chr9:3852688 | 0 | dispersed | |
Bda07g00737 | Bda-Chr7:8698315 | Bda03g00160 | Bda-Chr3:1319585 | 2.20E-94 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16127 | PF00847 | AP2 | 3.30E-07 | CL0081 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda07g00737 | K09285 | - | pvy:116115844 | 592.423 |