Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00753 ATGTTTCAAGAAGATGGTTCATCTTCCATAACTTCATCACCCCTTCAATTCTTTTCCATGATGTCTCTTTCACCAACCTTCGGATCACCGTATCCATGGCTCAGAGAGCTCAAATCTGAAGAAAGGGGATTATATCTGATCCATTTGCTGCTAACTTGTGCAAATCATGTGGCCTCCGGCAGCCTTGAAAATGCAAATATTTCGTTAGATCAAATCTCCCATCTGGCCTCCCCGGTTGGCGATACAATGCAGCGAATTGCTGCTCATTTCACTGAGGCGCTTGGCGATCGAATCCTCAAATCTTTGCCGGGGATCTACAAGGCTCGATATTTGACTCAAACTCCTCTTGTTTCTGAGGAAATTGTTGTTAGAAAACTGTTTTTCGAAATGTTTCCATTCCACAAAGTGACTTTTTTGCTGACAAATCAAGCCATTATGGAAGCCATGGAAGGAGAAAAGATGGTTCATATTATTGATCTCCATGCTGCTGAACCAGCGCAGTGGGTTGCCCTTCTTCAAGCTTTGAGCTTCAGACCAGGTGGTCCACCCCATTTGAGACTCACTGGAGTTCATCAACAGAAAGTGGTATTGGATCATATGGCTCGAAGACTAACCGAAGAAGCTGAAAAATTGGATATTCCTTTTCAGTTCAATTCAATAGTCTGCAAATTGGAGAATCTAGTGATCGAAAATCTTCGTGTAAAAACCGGGGAGGCTCTTGCGATAAGCTCAGTTCTTCAATTGCACACCCTTTTGGCCTCGGACGATGAACCTCAAAGAAGAAGTTTAAACGGAGCTCAATTTTATCGAAATATGCAAGCGAACAATGGACTGGCGGGAGAGTTGATTGATAAAGAGATGGTTAATGGGTGTAGTCCGAGCTCCGATTCGGCCTCCTCTTCGCCATTATCGCAGTCTAGTTCGATGAAGATAGATAGTTTTCTCAACGCCTTATCGGCTTTGACCCCAAAAGTAATGGTAGTTACGGAGCAAGACTGTAATCACAATGGATCCACTCTCATGGAGAGGCTATTGGAGGCTCTCCACTCATATGCAGCCATTTTCGACTGCTTGGAGTTCACCATGGGAAGAACACCATACGAGAGACTGAAGGTGGAGAAAATGATATTCGGAGAGGAAATCAAGAACATCATCGCTTGCGAGGGAATCGAACGGAGGGAAAGGCACGAAAAGCTCGAGAAATGGATTCACCGGCTCGAATCGATCGGGTTTGGAATTGTAAATTTGAGCAACTACGGCATTTTACAAGCGAAAAGGTTGTTGTTGGGATATGGCTGCGACGGGTACAAGATCAGGGAAGAGAGCGGCTGTGTGGTCATCTGTTGGCACGACCAGCCGTTGTTTTCGGTCTCCGCTTGGAGGGATAGGAGGTAG 1395 45.23 MFQEDGSSSITSSPLQFFSMMSLSPTFGSPYPWLRELKSEERGLYLIHLLLTCANHVASGSLENANISLDQISHLASPVGDTMQRIAAHFTEALGDRILKSLPGIYKARYLTQTPLVSEEIVVRKLFFEMFPFHKVTFLLTNQAIMEAMEGEKMVHIIDLHAAEPAQWVALLQALSFRPGGPPHLRLTGVHQQKVVLDHMARRLTEEAEKLDIPFQFNSIVCKLENLVIENLRVKTGEALAISSVLQLHTLLASDDEPQRRSLNGAQFYRNMQANNGLAGELIDKEMVNGCSPSSDSASSSPLSQSSSMKIDSFLNALSALTPKVMVVTEQDCNHNGSTLMERLLEALHSYAAIFDCLEFTMGRTPYERLKVEKMIFGEEIKNIIACEGIERRERHEKLEKWIHRLESIGFGIVNLSNYGILQAKRLLLGYGCDGYKIREESGCVVICWHDQPLFSVSAWRDRR 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8960640 8962034 + Bda025894.1 Bda07g00753 9643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00753 464 ProSiteProfiles GRAS family profile. 37 461 IPR005202 -
Bda07g00753 464 PANTHER SCARECROW-LIKE PROTEIN 3 2 462 IPR030008 GO:0003700|GO:0005634|GO:0009739
Bda07g00753 464 Pfam GRAS domain family 46 461 IPR005202 -
Bda07g00753 464 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 462 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00753 Bda-Chr7:8960640 Bda14g00447 Bda-Chr14:3218135 0 dispersed
Bda07g00753 Bda-Chr7:8960640 Bda01g01147 Bda-Chr1:46545196 2.05E-68 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16128 PF03514 GRAS 3.20E-134 CL0063 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00753 - - tcc:18589932 681.404