Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda07g00763 | ATGCTTGGTCTCCGAGACCTCTTCGTCGTCGCTCCGGCTTCTTCTTTTCACTCGCACGAACCCATCCTCTCAGATCCACATTCGATCGTCGGTTCAAACCCCGGAACAGCTCTTGGCGTCGGAGTCGGTGTCGGGCTTTTTCCTCTCCTAGCAACTGCTCCTTGCCTAGCTCCGTCCAACGTCGGTGGAGCTGAAGATCAAAATATCGGTCATCGAATTAGAGGCGGAGGAATCCAACTATGGCACAATCAACAGCCGAACCACGATAGTTACTTAAGGAAACCAACAATTGATAACCATAGCTCTGGAAATTCTGAAAATGGCGGAGTTATCGGGTCTGCGGCCACCTGTCAAGACTGTGGAAACCAAGCGAAAAAAGATTGCAGCCATAGAAGGTGTAGAACCTGCTGCAAAAGCCGCGGGTTTGACTGTTCAACTCACGTTAAGAGCACATGGGTTCCGGCGGCTCGGCGGAGGGAGCGGCAGATGATAACCGCCTGTTCATCTGGGTCAACTTCCGGTGCAAAAAAACCAAGACTCGTCACTTCACAGACCACGACCAACTCCCACACTTCCGCCTCCAACACCACTCCTCCGAGAAGCTATGAAACCACCTCTAGCCACCCTGCCGATGGAACGAAGGAGACGCTACCGGGGCAAGTACGTGCGCCAGCGGTGTTCAAGTGCGTGAGAGTGACCGCCGTGGACGACGAAGAAGACGAATACGCTTACCAAGCCGTCGTAAGAATCGGAGGACACGTTTTCAAAGGGTTTCTGTACGATCAAGGAGCTGAATCAAGAGAAATTTTTCCAAATATTTCAGACCTCCATTTAAATGGTGCTGTAGGCAATGGCAAAAATGGAGCTTCTTCTACGTCTCCTCTTCTCCATCCTACCGATATCTTTGGAACCTCTGGTTCAGCCGCTGCTGCTACTGCATTTCTTGGTGGTTCAAGCTACGGTAATGGTGTTTAA | 975 | 51.18 | MLGLRDLFVVAPASSFHSHEPILSDPHSIVGSNPGTALGVGVGVGLFPLLATAPCLAPSNVGGAEDQNIGHRIRGGGIQLWHNQQPNHDSYLRKPTIDNHSSGNSENGGVIGSAATCQDCGNQAKKDCSHRRCRTCCKSRGFDCSTHVKSTWVPAARRRERQMITACSSGSTSGAKKPRLVTSQTTTNSHTSASNTTPPRSYETTSSHPADGTKETLPGQVRAPAVFKCVRVTAVDDEEDEYAYQAVVRIGGHVFKGFLYDQGAESREIFPNISDLHLNGAVGNGKNGASSTSPLLHPTDIFGTSGSAAAATAFLGGSSYGNGV | 324 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 9051685 | 9052741 | + | Bda025901.1 | Bda07g00763 | 9653 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda07g00763 | 324 | TIGRFAM | put_zinc_LRP1: putative zinc finger domain, LRP1 type | 116 | 158 | IPR006510 | - | |
Bda07g00763 | 324 | PANTHER | PROTEIN LATERAL ROOT PRIMORDIUM 1 | 2 | 322 | IPR007818 | GO:0003700|GO:0006355 | |
Bda07g00763 | 324 | MobiDBLite | consensus disorder prediction | 166 | 213 | - | - | |
Bda07g00763 | 324 | MobiDBLite | consensus disorder prediction | 166 | 218 | - | - | |
Bda07g00763 | 324 | Pfam | Domain of unknown function (DUF702) | 115 | 265 | - | - | |
Bda07g00763 | 324 | MobiDBLite | consensus disorder prediction | 84 | 107 | - | - | |
Bda07g00763 | 324 | PANTHER | PROTEIN LATERAL ROOT PRIMORDIUM 1 | 2 | 322 | - | - | |
Bda07g00763 | 324 | TIGRFAM | LRP1_Cterm: LRP1 C-terminal domain | 217 | 263 | IPR006511 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda07g00763 | Bda09g01331 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g00763 | Bda-Chr7:9051685 | Bda08g01246 | Bda-Chr8:50963196 | 1.61E-47 | dispersed | |
Bda14g00445 | Bda-Chr14:3202878 | Bda07g00763 | Bda-Chr7:9051685 | 2.44E-57 | transposed | |
Bda07g00763 | Bda-Chr7:9051685 | Bda09g01331 | Bda-Chr9:45050922 | 2.05E-96 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16129 | PF05142 | DUF702 | 4.30E-60 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda07g00763 | - | - | vri:117916582 | 435.647 |