Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00763 ATGCTTGGTCTCCGAGACCTCTTCGTCGTCGCTCCGGCTTCTTCTTTTCACTCGCACGAACCCATCCTCTCAGATCCACATTCGATCGTCGGTTCAAACCCCGGAACAGCTCTTGGCGTCGGAGTCGGTGTCGGGCTTTTTCCTCTCCTAGCAACTGCTCCTTGCCTAGCTCCGTCCAACGTCGGTGGAGCTGAAGATCAAAATATCGGTCATCGAATTAGAGGCGGAGGAATCCAACTATGGCACAATCAACAGCCGAACCACGATAGTTACTTAAGGAAACCAACAATTGATAACCATAGCTCTGGAAATTCTGAAAATGGCGGAGTTATCGGGTCTGCGGCCACCTGTCAAGACTGTGGAAACCAAGCGAAAAAAGATTGCAGCCATAGAAGGTGTAGAACCTGCTGCAAAAGCCGCGGGTTTGACTGTTCAACTCACGTTAAGAGCACATGGGTTCCGGCGGCTCGGCGGAGGGAGCGGCAGATGATAACCGCCTGTTCATCTGGGTCAACTTCCGGTGCAAAAAAACCAAGACTCGTCACTTCACAGACCACGACCAACTCCCACACTTCCGCCTCCAACACCACTCCTCCGAGAAGCTATGAAACCACCTCTAGCCACCCTGCCGATGGAACGAAGGAGACGCTACCGGGGCAAGTACGTGCGCCAGCGGTGTTCAAGTGCGTGAGAGTGACCGCCGTGGACGACGAAGAAGACGAATACGCTTACCAAGCCGTCGTAAGAATCGGAGGACACGTTTTCAAAGGGTTTCTGTACGATCAAGGAGCTGAATCAAGAGAAATTTTTCCAAATATTTCAGACCTCCATTTAAATGGTGCTGTAGGCAATGGCAAAAATGGAGCTTCTTCTACGTCTCCTCTTCTCCATCCTACCGATATCTTTGGAACCTCTGGTTCAGCCGCTGCTGCTACTGCATTTCTTGGTGGTTCAAGCTACGGTAATGGTGTTTAA 975 51.18 MLGLRDLFVVAPASSFHSHEPILSDPHSIVGSNPGTALGVGVGVGLFPLLATAPCLAPSNVGGAEDQNIGHRIRGGGIQLWHNQQPNHDSYLRKPTIDNHSSGNSENGGVIGSAATCQDCGNQAKKDCSHRRCRTCCKSRGFDCSTHVKSTWVPAARRRERQMITACSSGSTSGAKKPRLVTSQTTTNSHTSASNTTPPRSYETTSSHPADGTKETLPGQVRAPAVFKCVRVTAVDDEEDEYAYQAVVRIGGHVFKGFLYDQGAESREIFPNISDLHLNGAVGNGKNGASSTSPLLHPTDIFGTSGSAAAATAFLGGSSYGNGV 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9051685 9052741 + Bda025901.1 Bda07g00763 9653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00763 324 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 116 158 IPR006510 -
Bda07g00763 324 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 2 322 IPR007818 GO:0003700|GO:0006355
Bda07g00763 324 MobiDBLite consensus disorder prediction 166 213 - -
Bda07g00763 324 MobiDBLite consensus disorder prediction 166 218 - -
Bda07g00763 324 Pfam Domain of unknown function (DUF702) 115 265 - -
Bda07g00763 324 MobiDBLite consensus disorder prediction 84 107 - -
Bda07g00763 324 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 2 322 - -
Bda07g00763 324 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 217 263 IPR006511 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g00763 Bda09g01331 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00763 Bda-Chr7:9051685 Bda08g01246 Bda-Chr8:50963196 1.61E-47 dispersed
Bda14g00445 Bda-Chr14:3202878 Bda07g00763 Bda-Chr7:9051685 2.44E-57 transposed
Bda07g00763 Bda-Chr7:9051685 Bda09g01331 Bda-Chr9:45050922 2.05E-96 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16129 PF05142 DUF702 4.30E-60 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00763 - - vri:117916582 435.647