Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00803 ATTGGTAAACCGGGAATGAGCCAGCCTAATTTAAAGCGTAGAGTGGGTAAATATGAGGTTGGAAGAACAATTGGCGAGGGAACATTTGCGAAAGTCAAATTTGCAAAGAATTCAGAGACGGGAGGAGCTGTTGCCATTAAAATACTCGATAAAGAGAAAGTTCTTAAGCACAAGATGGCAGAACAGATCAAGCGGGAGGTAGCAACAATGAAGTTAATAAAGCATCCGAATGTGGTGCGATTGTACGAGGTAATGGGAAGCAGGACGAAAATATTCATTGTTTTGGAGTTTGTTACCGGCGGGGAACTATTTGACAAAATTGTCAACCATGGTCGTATGAGAGAGGATGAAGCGAGGCGATATTTTCAGCAGCTTATAAATGCAGTTGACTATTGCCATAGCAGGGGTGTCTACCATAGGGACCTTAAGCCGGAAAATCTGCTTTTAGATGCTTATGGAAAACTTAAAGTTTCTGATTTTGGATTAAGTGCACTGTCTCAACAAGTCAGGGATGATGGTTTGCTTCACACTACTTGTGGAACTCCAAATTATGTTGCTCCCGAGGTCCTCAATGATAGAGGCTATGATGGGGCGACTGCGGATTTGTGGTCGTGCGGAGTCATACTCTTTGTACTCCTCGCAGGTTACTTGCCTTTCGATGATTCTAATCTTATGACCCTTTATCGAAAAATTTCGGCTGCTGAATTCACTTGCCCTCCATGGCTATCTTTCGACGCCATGAAATTGATCGCTCGGATTCTGGATCCTAATCCTATGACTCGAATCTCGATACCCGAGATTTTAAGCGATGAATGGTTTAAGAAGGACTACAGTCCGCCTGTATTTGACGAGAAGCACGATACAAATTTGGATGATGTGGAAGCTGTTTTTAAAGATTCAGAGGAACACCATGTGACGGAGAAGAAAGAAGAGCAGCCAGTTGCAATGAATGCCTTTGATCTAATATCCATGTCCAAAGGACTGAACCTGGGAAATTTGTTCGATGCCGAACAGGAATTTAAAAGAGAAACTAGGTTTACATCTAAATGCGCTGCAAATGACATAATAAACAAGATAGAAGAGGCTGCAAAACCTCTTGGTTTTGATGTAAAAAAGAAAAATTACAAGATGAGGCTCGAAAATTCAAAAGCCGGGAGGAAGGGAAACCTTAATATTGCGACTCAGATTTTTCAAGTGGCACCCTCTCTTCACATGGTTGAGGTACGAAAAGCAAAAGGCGACACTTTGGAGTTTCATAAGTTCTACAAAAACCTCTCGACTTCGCTGGAAGACGTCGTGTGGAAGACGGAGGAAGACATGACGAAA 1326 42.38 IGKPGMSQPNLKRRVGKYEVGRTIGEGTFAKVKFAKNSETGGAVAIKILDKEKVLKHKMAEQIKREVATMKLIKHPNVVRLYEVMGSRTKIFIVLEFVTGGELFDKIVNHGRMREDEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDAYGKLKVSDFGLSALSQQVRDDGLLHTTCGTPNYVAPEVLNDRGYDGATADLWSCGVILFVLLAGYLPFDDSNLMTLYRKISAAEFTCPPWLSFDAMKLIARILDPNPMTRISIPEILSDEWFKKDYSPPVFDEKHDTNLDDVEAVFKDSEEHHVTEKKEEQPVAMNAFDLISMSKGLNLGNLFDAEQEFKRETRFTSKCAANDIINKIEEAAKPLGFDVKKKNYKMRLENSKAGRKGNLNIATQIFQVAPSLHMVEVRKAKGDTLEFHKFYKNLSTSLEDVVWKTEEDMTK 442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9522295 9527035 - Bda033863 Bda07g00803 9693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00803 442 SUPERFAMILY Protein kinase-like (PK-like) 14 295 IPR011009 -
Bda07g00803 442 Gene3D Phosphorylase Kinase; domain 1 7 97 - -
Bda07g00803 442 Gene3D Kinase associated domain 1, KA1 310 435 - -
Bda07g00803 442 Pfam NAF domain 313 372 IPR004041 GO:0007165
Bda07g00803 442 CDD STKc_SnRK3 17 272 - -
Bda07g00803 442 Gene3D Transferase(Phosphotransferase) domain 1 98 280 - -
Bda07g00803 442 ProSiteProfiles NAF domain profile. 311 335 IPR018451 GO:0007165
Bda07g00803 442 PANTHER - 8 437 - -
Bda07g00803 442 CDD CIPK_C 317 431 - -
Bda07g00803 442 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 8 437 - -
Bda07g00803 442 Pfam Protein kinase domain 18 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g00803 442 SMART serkin_6 18 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g00803 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Bda07g00803 442 ProSiteProfiles Protein kinase domain profile. 18 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g00803 442 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00803 Bda-Chr7:9522295 Bda13g00406 Bda-Chr13:5008980 0 dispersed
Bda09g00946 Bda-Chr9:37511459 Bda07g00803 Bda-Chr7:9522295 8.46E-145 dispersed
Bda08g00341 Bda-Chr8:3480425 Bda07g00803 Bda-Chr7:9522295 2.36E-164 transposed
Bda07g00803 Bda-Chr7:9522295 Bda09g00480 Bda-Chr9:6292252 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69711 PF00069 Pkinase 5.40E-71 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00803 - - cit:102618018 824.698