Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00808 ATGGCTGTTGTTGCCTTCTCCGATCTTCATACTGAAGCTGGCTTGAAATCGCTTGACGAGTTCCTCTCTGGAAAATCTTACATCTCCGGGGACAAGCTATCTAAGGATGATATAAAGGTTTTCGCGGTTATTTCTGGCCGGCCGTCTGATTCCTTTCCTAATGCTGCTAGTTGGTATGACTGTATCACTTCTCATCTTGCCCCAAGTTTCCCTGGAAAAGCTACCGGTGTGAGAGTCGGTGGTAAGGCTACCACTGTGGGAGGTGCCCCGGCCGAGAAACTTAAGGAGGATGCTCCTGCTGAAGAAGATGACGACGACCTTGATCTCTTTGGTGATGAAACGGAAGAGGAGAAGAAAGTAGCAGAAGAGAGGGAGGCAGCCAAAAAATCATCTGGGAAGAAGAAAGAGAGTGGAAAATCTTCTGTTCTTTTGGATGTAAAACCGTGGGATGACGAAACAGACATGAAGAAGCTAGAAGAGGCGGTTCGCAGTATTGAGATGCCTGGTCTCTTGTGGGGCGCATCCAAACTTGTGCCAGTTGGATATGGAATAAAGAAGCTGCAAATCATGCTCACCATTGTTGATGATCTCGTTTCGGTCGATTCCCTTATAGAGGAACAGCTTACCGTCGAACCGTGCAACGAGTACATCCAAAGCTGTGACATTGCTGCCTTCAACAAAATCTAA 687 47.16 MAVVAFSDLHTEAGLKSLDEFLSGKSYISGDKLSKDDIKVFAVISGRPSDSFPNAASWYDCITSHLAPSFPGKATGVRVGGKATTVGGAPAEKLKEDAPAEEDDDDLDLFGDETEEEKKVAEEREAAKKSSGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSIEMPGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEEQLTVEPCNEYIQSCDIAAFNKI 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9573200 9575455 - Bda025945.1 Bda07g00808 9698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00808 228 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 4 228 - -
Bda07g00808 228 CDD EF1B 142 228 IPR014038 GO:0003746|GO:0006414
Bda07g00808 228 Gene3D - 132 228 IPR014717 -
Bda07g00808 228 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 103 111 IPR001326 GO:0003746|GO:0005853|GO:0006414
Bda07g00808 228 MobiDBLite consensus disorder prediction 113 135 - -
Bda07g00808 228 MobiDBLite consensus disorder prediction 81 135 - -
Bda07g00808 228 PANTHER ELONGATION FACTOR 1-BETA 2 4 228 - -
Bda07g00808 228 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 217 228 IPR001326 GO:0003746|GO:0005853|GO:0006414
Bda07g00808 228 MobiDBLite consensus disorder prediction 98 112 - -
Bda07g00808 228 SUPERFAMILY GST C-terminal domain-like 10 64 IPR036282 -
Bda07g00808 228 SUPERFAMILY eEF-1beta-like 136 228 IPR036219 -
Bda07g00808 228 SMART EF1_GNE_2 139 228 IPR014038 GO:0003746|GO:0006414
Bda07g00808 228 Pfam EF-1 guanine nucleotide exchange domain 141 228 IPR014038 GO:0003746|GO:0006414
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00808 Bda-Chr7:9573200 Bda14g01368 Bda-Chr14:16042437 5.17E-81 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00808 K03232 - pvy:116130992 308.916