Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda07g00808 | ATGGCTGTTGTTGCCTTCTCCGATCTTCATACTGAAGCTGGCTTGAAATCGCTTGACGAGTTCCTCTCTGGAAAATCTTACATCTCCGGGGACAAGCTATCTAAGGATGATATAAAGGTTTTCGCGGTTATTTCTGGCCGGCCGTCTGATTCCTTTCCTAATGCTGCTAGTTGGTATGACTGTATCACTTCTCATCTTGCCCCAAGTTTCCCTGGAAAAGCTACCGGTGTGAGAGTCGGTGGTAAGGCTACCACTGTGGGAGGTGCCCCGGCCGAGAAACTTAAGGAGGATGCTCCTGCTGAAGAAGATGACGACGACCTTGATCTCTTTGGTGATGAAACGGAAGAGGAGAAGAAAGTAGCAGAAGAGAGGGAGGCAGCCAAAAAATCATCTGGGAAGAAGAAAGAGAGTGGAAAATCTTCTGTTCTTTTGGATGTAAAACCGTGGGATGACGAAACAGACATGAAGAAGCTAGAAGAGGCGGTTCGCAGTATTGAGATGCCTGGTCTCTTGTGGGGCGCATCCAAACTTGTGCCAGTTGGATATGGAATAAAGAAGCTGCAAATCATGCTCACCATTGTTGATGATCTCGTTTCGGTCGATTCCCTTATAGAGGAACAGCTTACCGTCGAACCGTGCAACGAGTACATCCAAAGCTGTGACATTGCTGCCTTCAACAAAATCTAA | 687 | 47.16 | MAVVAFSDLHTEAGLKSLDEFLSGKSYISGDKLSKDDIKVFAVISGRPSDSFPNAASWYDCITSHLAPSFPGKATGVRVGGKATTVGGAPAEKLKEDAPAEEDDDDLDLFGDETEEEKKVAEEREAAKKSSGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSIEMPGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEEQLTVEPCNEYIQSCDIAAFNKI | 228 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 9573200 | 9575455 | - | Bda025945.1 | Bda07g00808 | 9698 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda07g00808 | 228 | PANTHER | EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER | 4 | 228 | - | - | |
Bda07g00808 | 228 | CDD | EF1B | 142 | 228 | IPR014038 | GO:0003746|GO:0006414 | |
Bda07g00808 | 228 | Gene3D | - | 132 | 228 | IPR014717 | - | |
Bda07g00808 | 228 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 1. | 103 | 111 | IPR001326 | GO:0003746|GO:0005853|GO:0006414 | |
Bda07g00808 | 228 | MobiDBLite | consensus disorder prediction | 113 | 135 | - | - | |
Bda07g00808 | 228 | MobiDBLite | consensus disorder prediction | 81 | 135 | - | - | |
Bda07g00808 | 228 | PANTHER | ELONGATION FACTOR 1-BETA 2 | 4 | 228 | - | - | |
Bda07g00808 | 228 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 2. | 217 | 228 | IPR001326 | GO:0003746|GO:0005853|GO:0006414 | |
Bda07g00808 | 228 | MobiDBLite | consensus disorder prediction | 98 | 112 | - | - | |
Bda07g00808 | 228 | SUPERFAMILY | GST C-terminal domain-like | 10 | 64 | IPR036282 | - | |
Bda07g00808 | 228 | SUPERFAMILY | eEF-1beta-like | 136 | 228 | IPR036219 | - | |
Bda07g00808 | 228 | SMART | EF1_GNE_2 | 139 | 228 | IPR014038 | GO:0003746|GO:0006414 | |
Bda07g00808 | 228 | Pfam | EF-1 guanine nucleotide exchange domain | 141 | 228 | IPR014038 | GO:0003746|GO:0006414 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g00808 | Bda-Chr7:9573200 | Bda14g01368 | Bda-Chr14:16042437 | 5.17E-81 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda07g00808 | K03232 | - | pvy:116130992 | 308.916 |