Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00811 ATGAGCGATTCGGGTTGTTCCAGTACTCGGAAAATCCGAAACATATGCATACTGGCCCATGTTGATCACGGAAAAACTACGCTTGCCGATCATCTGATTGCCGCGTCGGGTGGCGGCGTACTCCACCCGAAGCTGGCTGGCCGCATTCGATTCATGGATTATCTGGACGAAGAGCAAAGGCGGGCTATAACAATGAAAAGCTCTTCTATCGCTCTTGACTACAGAGACTATTCAATAAACCTCATAGACTCCCCTGGGCATATGGACTTCTGTAGTGAGGTTTCGACTGCTGCTAGACTCAGCGATGGGGCTTTGGTGCTGGTTGATTCGGTGGAGGGCGTTCACATTCAAACACACGCAGTTTTGCGCCAAGCTTGGATTGAGAAGCTAACACCTTGTTTAGTTCTTAATAAGATTGATAGATTGATTTGTGAGTTGAAGTTGAGCCCCATGGAAGCCTATAACCGATTGTTGAGGATCATTCATGAAGTTAATGGGATTATGAGTGCATATAAGTCGGAGAAGTATTTGTCGGATGTGGATTCGTTACTAGCTGGACCTTTTGGTGATTTTTATGCATCGAAACTTGGGGCAAGTGTAGCCACTTTGAAGAAGGCATTGTGGGGGCCTCGTTATTTCAACCCAAAAACGAAGATGATTGTGGGGAAGAAGGGATTAAGTGGTGGAAGTAAAGCTCGGCCGATGTTTGTTCAGTTCGTGCTGGAGCGGCTATGGGAAGTGTACAAGGCAGCTTTGGACTCCGATGGGGACAAAGATGTTCTTAGAAAAGTTAATAGCACATTTAATTTAAACGTTCCAGCCCGCGAGCTGTCTAACAAGGATCCGAAAGTTGTTCTTCAAGCTATTATGAGCAGGTGGCTTCCTTTGTCCGAGGCAATACTGTCAATGGTTGTGAAGTGTATGCCAGACCCAATTGCAGCACAATCATATCGAATACCACGTTTGCTTCGAAAGCGGGACATTTTGGACGATGAGGGCGATATCAGTGTGCTTACACAGGCCGAGGCTGTGAGAAAATCAATCGAGGCTTGTGATTCTGACGTTGAAGCTCCATGCGTTGCTTTTGTGTCCAAAATGTTTGCTGTTCCTATGAAAATGATTCCTCAGAGGGGGCCCCAAGGAGAGATTGTGAGCAATTTATCTGACGAGGGGGGAGTAGGTGACTCAGATGAGTGTTTTCTAGCATTTGCACGGGTATTTAGCGGCGTACTTTGTTTGGGGCAGAAAATTTTTGTGCTTTCTGCTTTATATGATCCATTACAAGAGGAATCGATGGAGAAGCATGTTCAGGAGGCTGAGTTGCATTCATTGTACTTAATGATGGGGCAAGGCTTAAAACCAGTGAGATCGGTCAAGGCAGGGAATGTTGTGGCCATACGAGGCCTTGGCCAGCATATCTTGAAAAGTGCGACTCTTTCGACCACAAAAAATTGTTGGCCTTTCTCTAGTATGGAATTTCAAGTTTCTCCAACACTTAAAGTTGCAATCGAACCTTCTGACCCGGCAGATATGGTTGCACTTTTAAGAGGCTTAAGACTTCTAAATCGAGCAGACCCATTTGTAGAGGTCACTGTTTCTGCTAGAGGGGAACATGTTCTCGCTGCTGCCGGAGAAGTTCATCTCGAGAGATGCATAAAGGATTTGAAAGAGAGATTTGCCAAGGTAAGCTTGGAAGTCTCTCCACCTCTTGTATCTTATAAAGAGACGATCGAGGGAGAGGTGTCTGGTATAATGGATATAGTGAAATTGTTTAGTGGAAACTCGGATTTTGTTGAAAAAACAACACCAAATGGGCGTTGTGTTGTACGTGTTCAGGTAATGAAGCTTCCGCTTGCGCTCACAAAAGTGCTTGATGAAAATTCTGATATACTTGCAGATATCATTGGAGTAAAAGCCGGACAGAGCAGTAAAGTTTCTGAAAGTAAAAGATCAAGAGTTGGACAAAACGAGAGTTCGGTGGAATCAGTTAAAAAGCGTATAATTGATGCTGTGTTTAGCGACATTTCGCAGACAAACGAGAAAGATAACGATGGAGACCGAGCTGACAAGTATAAAGCAATGTGGTCGAAACTCCTCCAGAGGATTTGGGCTCTTGGACCTCGGCAGATTGGTCCAAACTTTCTATTTACCCCAGAGTTTAAAAGGAATGATTCTAAAAATTGCATGCTTGTTCATGGCCCCTCTTACGTATCCGAGAGATTAGGCTTTATAAATGAGACTAGAAATGACAATTTGGATGCTAATGCAGCTCTAGATCACAACTTGGCTGCTTCAACATCACCAAAAGCATCTCAACCACTATGTATGGAGGCAGAGAGTTTTGAGAACAGTGTTGTATCTGGATTTCAGTTGGCTACATCGGCCGGACCTTTATGTGATGAACCAATGTGGGGCTTGGGATTTATTGTCGAAGCCTATGTTTATCCATCGACGGATCACCCACATGAACTTGAAACGTCCATACTCTCCGGTCAGCGAGGAATTTTCACTGGACAAGTTATGACAGCAGTCAAAGAGGCTTGTAGAAGTGCTCTACTTCAAAAGAAGCCTCGGCTGGTTGAAGCCATGTACTTTTGCGAATTGAGCACACCCACTGAATATCTCGGACCCATGTATGCTGTGTTGGCCCGAAGGCGGGCCCGTGTTTTGAAGGAAGAAATGCAAGAGGGTTCGTCTTTGTTTACCGTCCATGCATATGTGCCGGTTTCCGAGAGCCTCGGCTTTGCAGACGAATTAAGAAGATGGACATCTGGAGCTGCTAGTGCTCTCCTCGTGCTTAGCCATTGGGAAGCACTTCCTGAAGATCCTTTCTTTGTACCCAAGACGGAAGAAGAAATCGAAGAGTTTGGAGACGGGTCGAGTGTGCTTCCTAATACGGCCCGGAAGCTCATCGATGCAGTCAGAAGGCGAAAAGGTCTTCCCGTTGAAGAAAAAGTCGTCCAACATGCAACAAAGCAGAGGACTTTGGCCCGGAAAGTG 3000 45.4 MSDSGCSSTRKIRNICILAHVDHGKTTLADHLIAASGGGVLHPKLAGRIRFMDYLDEEQRRAITMKSSSIALDYRDYSINLIDSPGHMDFCSEVSTAARLSDGALVLVDSVEGVHIQTHAVLRQAWIEKLTPCLVLNKIDRLICELKLSPMEAYNRLLRIIHEVNGIMSAYKSEKYLSDVDSLLAGPFGDFYASKLGASVATLKKALWGPRYFNPKTKMIVGKKGLSGGSKARPMFVQFVLERLWEVYKAALDSDGDKDVLRKVNSTFNLNVPARELSNKDPKVVLQAIMSRWLPLSEAILSMVVKCMPDPIAAQSYRIPRLLRKRDILDDEGDISVLTQAEAVRKSIEACDSDVEAPCVAFVSKMFAVPMKMIPQRGPQGEIVSNLSDEGGVGDSDECFLAFARVFSGVLCLGQKIFVLSALYDPLQEESMEKHVQEAELHSLYLMMGQGLKPVRSVKAGNVVAIRGLGQHILKSATLSTTKNCWPFSSMEFQVSPTLKVAIEPSDPADMVALLRGLRLLNRADPFVEVTVSARGEHVLAAAGEVHLERCIKDLKERFAKVSLEVSPPLVSYKETIEGEVSGIMDIVKLFSGNSDFVEKTTPNGRCVVRVQVMKLPLALTKVLDENSDILADIIGVKAGQSSKVSESKRSRVGQNESSVESVKKRIIDAVFSDISQTNEKDNDGDRADKYKAMWSKLLQRIWALGPRQIGPNFLFTPEFKRNDSKNCMLVHGPSYVSERLGFINETRNDNLDANAALDHNLAASTSPKASQPLCMEAESFENSVVSGFQLATSAGPLCDEPMWGLGFIVEAYVYPSTDHPHELETSILSGQRGIFTGQVMTAVKEACRSALLQKKPRLVEAMYFCELSTPTEYLGPMYAVLARRRARVLKEEMQEGSSLFTVHAYVPVSESLGFADELRRWTSGAASALLVLSHWEALPEDPFFVPKTEEEIEEFGDGSSVLPNTARKLIDAVRRRKGLPVEEKVVQHATKQRTLARKV 1000
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9592429 9595553 - Bda033866 Bda07g00811 9701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00811 1000 CDD aeEF2_snRNP_like_IV 568 865 - -
Bda07g00811 1000 Gene3D Translation factors 311 494 - -
Bda07g00811 1000 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 201 999 - -
Bda07g00811 1000 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 4 181 - -
Bda07g00811 1000 Gene3D Yeast translation eEF2 (G' domain) 188 294 - -
Bda07g00811 1000 Gene3D Elongation Factor G (Translational Gtpase), domain 3 496 572 - -
Bda07g00811 1000 PRINTS GTP-binding elongation factor signature 96 107 IPR000795 GO:0003924|GO:0005525
Bda07g00811 1000 PRINTS GTP-binding elongation factor signature 80 90 IPR000795 GO:0003924|GO:0005525
Bda07g00811 1000 PRINTS GTP-binding elongation factor signature 132 141 IPR000795 GO:0003924|GO:0005525
Bda07g00811 1000 PRINTS GTP-binding elongation factor signature 14 27 IPR000795 GO:0003924|GO:0005525
Bda07g00811 1000 PRINTS GTP-binding elongation factor signature 60 68 IPR000795 GO:0003924|GO:0005525
Bda07g00811 1000 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 10 312 IPR000795 GO:0003924|GO:0005525
Bda07g00811 1000 PANTHER - 201 999 - -
Bda07g00811 1000 PANTHER - 4 181 - -
Bda07g00811 1000 CDD eEF2_snRNP_like_C 861 940 - -
Bda07g00811 1000 Gene3D - 857 992 - -
Bda07g00811 1000 SUPERFAMILY EF-G C-terminal domain-like 495 569 IPR035647 -
Bda07g00811 1000 SUPERFAMILY EF-G C-terminal domain-like 861 959 IPR035647 -
Bda07g00811 1000 TIGRFAM small_GTP: small GTP-binding protein domain 11 141 IPR005225 GO:0005525
Bda07g00811 1000 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 309 IPR027417 -
Bda07g00811 1000 CDD EF2_II 358 482 - -
Bda07g00811 1000 SMART EFG_C_a 858 947 IPR000640 -
Bda07g00811 1000 SUPERFAMILY Ribosomal protein S5 domain 2-like 571 860 IPR020568 -
Bda07g00811 1000 Gene3D - 6 187 IPR027417 -
Bda07g00811 1000 Gene3D - 593 855 IPR014721 -
Bda07g00811 1000 SUPERFAMILY Translation proteins 349 491 IPR009000 -
Bda07g00811 1000 Pfam Elongation factor G C-terminus 859 943 IPR000640 -
Bda07g00811 1000 Pfam Elongation factor Tu GTP binding domain 11 169 IPR000795 GO:0003924|GO:0005525
Bda07g00811 1000 Pfam Elongation factor Tu domain 2 401 479 IPR004161 GO:0005525
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00811 Bda-Chr7:9592429 Bda15g00849 Bda-Chr15:13249945 1.22E-129 dispersed
Bda07g00811 Bda-Chr7:9592429 Bda04g01109 Bda-Chr4:61986941 2.01E-23 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00811 K14536 - zju:107410537 1491.09