Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00897 ATGGATCTTTTTAAACACTTCACTGACGTCAGCAGGGGTGTGAGAAGGCTTGGTGCAGCTGCAGTAGATATGTGTCATGTTGCTTTAGGAATTGTGGAAGCGTATTGGGAGTATCGTCTTAAGCCGTGGGATATGGCTGCCGGTGTTCTGATAGTTGAAGAAGCCGGTGGGGCTGTTACTTGCATGGATGGTGGCAAATTTTGTGTATTTGACAGATCTGTCTTGGTCTCCAATGGTGTTATGCACGAAAAGCTTTTAGAGAAAATTGGAGCAGCTACAGAGAATCTGAAGAGCAAGGGAATGGATTTGTCTTTATGGTTGAAGCCACAAGAATACTACACAGATTTT 348 43.97 MDLFKHFTDVSRGVRRLGAAAVDMCHVALGIVEAYWEYRLKPWDMAAGVLIVEEAGGAVTCMDGGKFCVFDRSVLVSNGVMHEKLLEKIGAATENLKSKGMDLSLWLKPQEYYTDF 116
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10516168 10518001 + Bda033875 Bda07g00897 9787

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00897 116 Pfam Inositol monophosphatase family 5 90 IPR000760 GO:0046855
Bda07g00897 116 SUPERFAMILY Carbohydrate phosphatase 2 93 - -
Bda07g00897 116 PANTHER PHOSPHATASE IMPL1, CHLOROPLASTIC 1 114 - -
Bda07g00897 116 Gene3D - 1 102 - -
Bda07g00897 116 PRINTS Inositol monophosphatase superfamily signature 40 64 IPR000760 GO:0046855
Bda07g00897 116 PRINTS Inositol monophosphatase superfamily signature 9 30 IPR000760 GO:0046855
Bda07g00897 116 PANTHER INOSITOL MONOPHOSPHATASE 1 114 - -
Bda07g00897 116 ProSitePatterns Inositol monophosphatase family signature 2. 43 57 IPR020550 GO:0046854
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00897 K01092 E3.1.3.25, IMPA, suhB; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] - vvi:100249170 213.386
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g159 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda07g00897 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011090 1 2 0 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 31
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda07g00897 Bda_Chr07 FPKM 4.899071 4.943317 8.468286 8.378554 11.212231 10.920907 10.190861 26.859444 29.577433