Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00940 ATGGCTGCTTCTTCTATGGCTCTTTCTTCATCATCTTTCGCTGGGAAGGCAGTCAAGCTCTCTCCTTCTGCTCCCGAGATTGTCGGAAATGGCAGAGTCAGCATGAGGAAGACAGGCGGCAAACCTGCATCCTCCGGCAGCCCATGGTACGGCCCCGACCGTGTAAAGTATTTGGGTCCATTCTCCGGAGAAGCTCCCTCCTACCTGACGGGAGAATTCCCCGGGGATTATGGATGGGACACTGCCGGACTCTCAGCCGACCCAGAGACCTTCGCCAAGAACCGGGAGCTGGAAGTCATCCACGCTCGATGGGCCATGCTAGGAGCCCTCGGCTGCGTCTTCCCGGAGCTGCTATCCCGGAATGGCGTGAAGTTCGGAGAGGCCGTGTGGTTCAAGGCGGGATCACAGATCTTCAGCGAGGGGGGTCTAGACTACCTGGGCAACCCGAGTTTGGTCCACGCTCAGAGCATCCTGGCCATCTGGGCTTCTCAGGTTATATTGATGGGCGCCGTCGAAGGCTACCGTATTGCCGGCGGGCCACTCGGAGAAGTCACCGACCCAATCTACCCAGGCGGGTCGTTCGACCCATTGGGTCTTGCTGACGACCCGGAGGCATTCGCGGAGCTGAAAGTGAAGGAGTTAAAGAACGGAAGGCTAGCCATGTTTTCCATGTTCGGATTCTACGTACAGGCCATCGTCACCGGAAAGGGTCCTCTTGAAAATCTGGCAGACCATCTCGCCGACCCTGTCAACAACAATGCCTGGGCTTACGCCACCAACTTCGTTCCCGGAAAGTGA 798 57.64 MAASSMALSSSSFAGKAVKLSPSAPEIVGNGRVSMRKTGGKPASSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFYVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10933820 10934617 - Bda026080.1 Bda07g00940 9830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00940 265 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 265 - -
Bda07g00940 265 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Bda07g00940 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Bda07g00940 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Bda07g00940 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 265 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00395 Bda-Chr5:48965605 Bda07g00940 Bda-Chr7:10933820 4.08E-168 dispersed
Bda07g00940 Bda-Chr7:10933820 Bda14g01617 Bda-Chr14:40739266 0 dispersed
Bda07g00939 Bda-Chr7:10931663 Bda07g00940 Bda-Chr7:10933820 1.17E-114 tandem
Bda07g00940 Bda-Chr7:10933820 Bda07g00941 Bda-Chr7:10963433 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00940 K08912 - rcu:8289767 514.227