Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00941 ATGGCTGCTTCTTCTATGGCACTTTCCTCCCCGTCCTTCGCCGGGAAGGCAGTGAAGCTCTCTCCCTCTGCTCCCGAGATTGTTGGAAATGGCAGAGTCAGCATGAGGAAGACAGGCGGCAAACCTGCATCCTCCGGAAGCCCATGGTACGGCCCCGACCGTGTGAAGTATTTGGGTCCATTCTCCGGAGAAGCTCCCTCCTACCTGACTGGAGAATTCCCCGGAGATTATGGATGGGACACTGCTGGACTCTCAGCCGACCCAGAGACCTTCGCCAAGAACCGGGAGCTGGAAGTCATCCACGCTCGATGGGCCATGCTCGGAGCCCTCGGCTGCGTCTTCCCGGAGCTGCTATCCCGGAACGGCGTGAAGTTCGGAGAGGCCGTGTGGTTCAAGGCGGGATCACAGATCTTCAGCGAGGGGGGTCTAGACTACCTGGGCAACCCGAGTTTGGTCCACGCTCAGAGCATCCTGGCCATCTGGGCTTCTCAGGTTATCTTGATGGGCGCCGTCGAAGGCTACCGTGTTGCCGGCGGGCCACTCGGAGAAGTCACCGACCCAATCTACCCAGGCGGTTCGTTCGACCCATTGGGTCTGGCTGACGACCCGGAGGCATTCGCAGAGCTGAAAGTGAAGGAGTTAAAGAACGGAAGGCTAGCCATGTTTTCCATGTTCGGATTCTACGTACAGGCCATCGTCACCGGTAAGGGACCTCTTGAAAATCTGGCCGACCATCTCGCCGACCCTGTCAACAACAATGCCTGGGCTTATGCCACCAACTTTGTTCCCGGAAAGTGA 798 58.27 MAASSMALSSPSFAGKAVKLSPSAPEIVGNGRVSMRKTGGKPASSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFYVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10963433 10964230 - Bda026083.1 Bda07g00941 9831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00941 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Bda07g00941 265 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 265 - -
Bda07g00941 265 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Bda07g00941 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 265 IPR001344 GO:0009765|GO:0016020
Bda07g00941 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00815 Bda-Chr1:38644168 Bda07g00941 Bda-Chr7:10963433 0 dispersed
Bda05g00187 Bda-Chr5:21442977 Bda07g00941 Bda-Chr7:10963433 0 dispersed
Bda07g00939 Bda-Chr7:10931663 Bda07g00941 Bda-Chr7:10963433 1.10E-114 dispersed
Bda07g00941 Bda-Chr7:10963433 Bda14g01617 Bda-Chr14:40739266 0 dispersed
Bda07g00940 Bda-Chr7:10933820 Bda07g00941 Bda-Chr7:10963433 0 tandem
Bda07g00941 Bda-Chr7:10963433 Bda07g00942 Bda-Chr7:10970419 2.08E-171 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00941 K08912 - rcu:8289767 519.62