Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00942 ATGAGGAAGACAGGAGGCAAACCTGCATCCTCCGGCAGCCCATGGTACGGCCCCGACCGTGTAAAGTATTTGGGTCCATTCTCCGGAGAAGCTCCCTCCTACCTGACAGGAGAATTCCCCGGAGATTATGGATGGGACACTGCCGGACTCTCAGCCGACCCAGAGACCTTCGCCAAGAACCGGGAGCTGGAAGTCATCCACGCTCGATGGGCCATGCTCGGAGCCCTCGGCTGCGTCTTCCCGGAGCTGCTATCCCGGAACGGCGTGAAGTTCGGAGAGGCCGTGTGGTTCAAGGCGGGATCACAGATCTTCAGCGAGGGGGGTCTAGACTACCTGGGCAACCCGAGTTTGGTCCACGCTCAGAGCATCCTGGCCATCTGGGCTTCTCAGGTTATCTTGATGGGCGCCGTCGAAGGCTACCGTGTTGCCGGCGGGCCACTCGGAGAAGTCACCGACCCAATCTACCCAGGCGGTTCGTTCGACCCATTGGGTCTGGCTGACGACCCGGAGGCATTCGCAGAGCTGAAAGTGAAGGAGTTAAAGAACGGAAGGCTAGCCATGTTTTCCATGTTCGGATTCTACGTACAGGCCATCGTCACCGGTAAGGGACCTCTTGAAAATCTGGCCGACCATCTCGCCGACCCTGTCAACAACAATGCCTGGGCTTATGCCACCAACTTTGTTCCCGGAAAGTGA 696 58.48 MRKTGGKPASSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFYVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10970419 10971114 + Bda026084.1 Bda07g00942 9832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00942 231 Gene3D Chlorophyll a/b binding protein domain 22 224 - -
Bda07g00942 231 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC 1 231 - -
Bda07g00942 231 Pfam Chlorophyll A-B binding protein 31 197 IPR022796 -
Bda07g00942 231 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 231 IPR001344 GO:0009765|GO:0016020
Bda07g00942 231 SUPERFAMILY Chlorophyll a-b binding protein 14 228 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00942 Bda-Chr7:10970419 Bda07g01813 Bda-Chr7:35220537 1.59E-167 dispersed
Bda07g00941 Bda-Chr7:10963433 Bda07g00942 Bda-Chr7:10970419 2.08E-171 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00942 K08912 - mnt:21386410 467.618