Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda07g00948 | TTTGGGTTGCGAGGTAGGGAAATGGATACGACTCCTGTTTCTTCTCCAGGTGCAAGTGACATGAGGCCTCGTAACAGTAAGGCGACCTCCATTACCGACAGAGACAAAACCATTGCTCAGTATAACGCAGACGCTCGGCTTTTGGCTAATTTTGAGAAGTCTACCGAGTCTGGTGAGTCTTTTAACTACTCGAGATCAGTTTTGCAGAGTTGTCAATCTGTGCCCGAAGAACAAATTACTGCTTATTTATCGATAATCCAAAGGGGTGGTCTAATTCAGCCATTTGGTTGCATGATCGCTGTCGAAGAAACCAGTCTAAAAATTATCGGTTATAGTGAGAATTGCTCTGATCTATTGGGTTTAAAGTCTCAATCAAAGTTAAAACAGGCAAAAAGTCTGATTGGAATTGATGTTAGAACACTTTTTACTCCTTCATCAAGTACTTCTTTAGTGAACGCTGCCGCGTCCAGGGAGATTTCGTTTCTAAACCCGATATGGGTTTATTCTAAGACATCCCAGAATCCATTTTATGCAATATTGCATAGAATTGACGTGGGAATTGTGATCGATTTGGAGCCTACAAAGTCGGGTGATCCTGCGATATCACTTGCAGGGGCAGTTCAGTCTCAGAAACTAGCTGTTCGTGCAATTTCTAGACTGCAATCTCTCCCTGGAGGTGATATTGGTGCTTTATGTGACATTGTTGTGGAAGATGTTCAGAAGCTTACTGGGTATGACAGGGTGATGGCCTACAAATTCCACGATGATGATCATGGCGAGGTGGTTTCAGAGCTTAGAAGATCAGACTTAGAGCCTTACCTTGGTTTGCATTATCCTTCCACAGATATTCCTCAAGCTGCTCGTTTTCTGTTCAAGCAGAACAGAATCCGAATGATCTGCGATTGCCATGCAAAACCTATTAAGATCATTCAAAGTGAGAAGCTAAAACAGTCTTTATGCTTAGTCAATTCAACTCTTCGATCACCTTATGGTTGTCATGCTCAATATATGATCAACATGGGCTCTATTGCTTCACTAGTAATGGCTGTCCTCATAAGAAGTAACAACGGGACAAAGCTTTGGGGGATCATCGTTTGCCACCACACTTCGCCCCGCTACCTCCCCTTCCCTATTCGTTATGCTTGCGAGTTACTTATGCAGGCATTTGGGCTGCAGCTCTACATGGAGTTTCGATTGGCATCACAATTAATGGAAAAGAACATTCTCAAAACTCAAATCTTAATCTCAGACATGCTTCTCCGAGACGGTCCTTACAGTCTAGTGACTCAATCTCCGAGTATTATGGATCTCGTGAAATGTGACGGAGCTGCATTGTACTACAACGGAACATGTTGGCTTTTGGGTGTGACACCATCCGAATCGCAAGTAATGGATATTGCAGAGTGGCTTCTTAATGATCATCAGGATTCTACCGGGTTGAGTACAGATACTTTAGTGGATTCTGGCTATCCTGGCGCAGCTTCACTGGGAGATGCAGTGTGTGGCATGGTAGCCGCGAGAATCAACTTAAAGGATTTCTTATTCTGGTTCAGATCTCGTGCAGCGAAAGAAGTGAAATGGGCCGGAGCAAAGCATCATCCTGAAGATAAGGACGATGGTGGAAAATTGCACCCAAGATCTTCTTTCAACGCCTTTCTTGAAGTCGTCAAAAATAGTAGTTTTCCTTGGGAGGTTTCGGAAATTAACGCCGTTCACACTTTGCAACTTATAATCAGAGATTCACTGCAGAACTTCAAAGACACGAGTACAAAAGGCCTAATTACTGCACAGCTGAGTGGTTCTGAGATGCAGAGGGTAGATGAACTTAGTTCGACTGCGAGGGAAATGCTTAGATTGATTGAGACAGCCACAGTTCCCATTTTTGGGGTTGATTCAGCTGGTCTTATCAATGGATGGAATGCTAAAATTTCTGAACTGACTGGATTAGAATCTAGTAACGCCATGGGAAAATCTTTGGTGGGTGAGGTTACTCATGAGGATTCTCGTCAAACAGTTGGAAATGTCCTTGGTCGTGCTTTGAAAGGCGAAGAAGAAAGAGATGTTGAGTTGAAACTGAGAAGTTTTACATGCGATAGAAGAGAATCTGCCTTGTATATTGTGGTCAATTCCTGCACAAGCCGGGACTATAGGAACCAAGTCATTGGCGTTTGCTTCGTAGGTCAAGATATTACAGCGGAGAAAATCGTAATGGATAAATTTATTCAACTACAAGGTGATTACAAGGCTATAATCCATAGTCTCAACCCCTTTTTTCCACCCATATTTGCCTCTGATGTGAATGCTTGCTGCTCTGAGTGGAATGCAGCCATGGAAAAACTAACTGGTTGGAAAAGAGATGAAGTTATAGGAAAAATTCTACCCGGAGAAGTTTTTGGAACGTTCTGTCGATTGAAAGGCCAAGATACGTTGACCAAGTTTATGATTTCACTTTACAGAAGCATTCTTGGTCAAGAAACTGAGGAGCTTCCATTTGGATTTTTCAATCGAAAAGGAATATTTGTCAAGGTGCTCTTAACAGCAAACAAGAGGGCGGATGGAGCTGGAGATATCATCGGCTGTTTCTGCTTCTTGCAGATTGCTGAGCATGTTGCTGAAGAACCCGTGGAAGAGGAGGGAGAGAGCTTTTTGCAATTGACGGAGTTGGCGTATATTCGGCAGGAGATAAACAATCCGTTGAACGGTATTAGATTTATCCACGAGCTTCTCGAGAGTAGCTGCATCGAGGAAAATCAGAAACTATTTCTTAATACCTGTCATGCATGTGAGAGACAGATCATGATGATCATGGAGGACAATAATTTGAGAACCATAGAAGGAGGAAGTATAGAGCTAAACGTCGAAGAATTTCTGCTGGGTGATGTTTTTGATGCCATTATCGGTCAAATCATGATCCTCGTGAGGAAGAAGCAGCTACAGCTTCAACACGAAATCCGGGAAGATATCGAGTCATTAATCCTTTATGGTGATCAAATTAAGTTACAGTTAGTTCTGTCCGATTTTTTGCTCAATGTAGTGAATTACGCACCTTCTCCCGGTGGGTGGGTCGAAATCAACATCTCAACGATTTTAATATCGATCGAAGATGGCCAAAACAAGATCCACTTGCAGGTCAGAATGACACACCCTGGTGAAGGTCTGCCATCAACGTTGGTCCAAGAAATGTTTGGAGAAGGAGAGCAATGCACTTCACATGAAGGTCTTGGGCTAAACCTCTCTAGAGAACTTCTGAGCAAGATGAATGGAAATGTTCATTATGTCAGAGAACACAATAAATGCTATTTCCTCGTCGATCTCGAGCTTCAAATGAAGAGAGATATACCCGAAGAGCCTAAAGCTATTGTTGAAACTACTGAGGTTCAGTCAGGATTCGTTGAAGTTGGCTATATATCGGGGGCTCATGGTATTCAAGGGGAAATTCGTGTAAAACCTAGTACTGGTTTTCCTGAATTGCGATTTTCTGAGCCTGGCAAAAGATGGTTGAAGCAAGAAACTCTAGGAAGGGAAAGCATTCGGGAAGTTGAACTGATGGAAGGAAGGGGACACCCAGGTCAAAAGAGCTGGATACTAAAGTTTCAAGGAATTGACACTGCAGAAGAGGCTAAGCTACTTACTGGGTCAAAATTACTCGTGAGGGAAGAAGATCGACCAGAGTTGGAGGAAGGTGATTTTTATACCCGTGATCTTCTTGGCATGAGAGTCATAATTAAGGAAACTGAGGAGCTTTTGGGAACTGTTACCAATGTCTACAACAGCGGAGGGAATGATCTTTTACAGGTCATGGTGAATCATTCAAAAGATGCTGGAGTGTCTGGACGTACTGTGTGGATACCTTTTGTTGAAGCAATAGTTCCAGATGTTGATGTTATCAGAAGGGAAATGCATATTACTCCACCAAAGGGGCTTTTAGAGTTGAATTTACGTGCAGATGAGAGATCAAAAAAAGAAAGGCGTCAACTTGAATGGAAAGAGAGAAAAAAGTTCCAAAAGCGACTCATAGCAGCAAAAAAGAAACTTTGTGAAATGGAGCAGCAACATGTATTTCACGGCTTCAAATTTGGCGAAAATTTTTCTATCAGATGGACGATGACTGAATTATCGAATGCCATAGAATGTGAGACCCTAAAGAATTCCTTGAAAATTTCAGAGGAATGCTTCGTTTCAAATGGAAAAGAGGAGACGCAAAATGATATTGTTAGTTGTAAGGAGGAGGGACTTCGTCTCACATCCGACAGAAAAACTGCCATTGTTTTAGTCGTAAATGAAGAGGGTTGGGAGGATATCTCTGATATTGCCAAGTGTGGAAGCACTAAGAATCCATCTTCTCTCCTTCAGACTCTGCTTGATGATGCTCAGAGATTTGCGCATATTCAATACAGGCAACTCGTCCCCCTGATATTGGTTTGCTCGGCTAGCAGAATTTCTTCAATTCAAAAGTTATTCTTGGATAATGATTACTTTGCTTTTGACTCGAAAAAAGTGTGGTTCTTGGAAGAAGAGAAGCTTCCAGTAGTCGGCCATTTGGTTGAGGAACAGAAATGGAGAAAAATTTTGATGAAATCACCATGGGAAATTCTTCAGTCACCTGTTGGATCTGGAGGAGTTATGAACTTGCTTTTGTCTCACAATCTCATTGATGATATTGGCGAAATGGGTATTGACTATGTTGAGGTGTGCTCTAGTAGTCAAAATTACGCGGGAATGAATTCGCTACTACTTGGGTTTCTTAATTCATGCAAAGCCGATGTTGGAATCCAACTTTTCGAAAACACGAACAATGACGAAAGTTTTGACATGATATTCTCGATTCAGTTTTTAAAGAAGTTGGCCAAACAGATGAATAAACTCCAATTCTACGCAATTCCGAACTCAAATTCTCACGTTGAGATGGTTGATAAAGAATGGATCGACGTCGAGCCTTCAACAGCCAACTCAAACGAGCTTCGATGCTCGATTCTCAGTTCCTTAAACATATGTTCAATGGATAAGGTATGTGCTATAAAGATTGGTGAATAG | 5034 | 41.95 | FGLRGREMDTTPVSSPGASDMRPRNSKATSITDRDKTIAQYNADARLLANFEKSTESGESFNYSRSVLQSCQSVPEEQITAYLSIIQRGGLIQPFGCMIAVEETSLKIIGYSENCSDLLGLKSQSKLKQAKSLIGIDVRTLFTPSSSTSLVNAAASREISFLNPIWVYSKTSQNPFYAILHRIDVGIVIDLEPTKSGDPAISLAGAVQSQKLAVRAISRLQSLPGGDIGALCDIVVEDVQKLTGYDRVMAYKFHDDDHGEVVSELRRSDLEPYLGLHYPSTDIPQAARFLFKQNRIRMICDCHAKPIKIIQSEKLKQSLCLVNSTLRSPYGCHAQYMINMGSIASLVMAVLIRSNNGTKLWGIIVCHHTSPRYLPFPIRYACELLMQAFGLQLYMEFRLASQLMEKNILKTQILISDMLLRDGPYSLVTQSPSIMDLVKCDGAALYYNGTCWLLGVTPSESQVMDIAEWLLNDHQDSTGLSTDTLVDSGYPGAASLGDAVCGMVAARINLKDFLFWFRSRAAKEVKWAGAKHHPEDKDDGGKLHPRSSFNAFLEVVKNSSFPWEVSEINAVHTLQLIIRDSLQNFKDTSTKGLITAQLSGSEMQRVDELSSTAREMLRLIETATVPIFGVDSAGLINGWNAKISELTGLESSNAMGKSLVGEVTHEDSRQTVGNVLGRALKGEEERDVELKLRSFTCDRRESALYIVVNSCTSRDYRNQVIGVCFVGQDITAEKIVMDKFIQLQGDYKAIIHSLNPFFPPIFASDVNACCSEWNAAMEKLTGWKRDEVIGKILPGEVFGTFCRLKGQDTLTKFMISLYRSILGQETEELPFGFFNRKGIFVKVLLTANKRADGAGDIIGCFCFLQIAEHVAEEPVEEEGESFLQLTELAYIRQEINNPLNGIRFIHELLESSCIEENQKLFLNTCHACERQIMMIMEDNNLRTIEGGSIELNVEEFLLGDVFDAIIGQIMILVRKKQLQLQHEIREDIESLILYGDQIKLQLVLSDFLLNVVNYAPSPGGWVEINISTILISIEDGQNKIHLQVRMTHPGEGLPSTLVQEMFGEGEQCTSHEGLGLNLSRELLSKMNGNVHYVREHNKCYFLVDLELQMKRDIPEEPKAIVETTEVQSGFVEVGYISGAHGIQGEIRVKPSTGFPELRFSEPGKRWLKQETLGRESIREVELMEGRGHPGQKSWILKFQGIDTAEEAKLLTGSKLLVREEDRPELEEGDFYTRDLLGMRVIIKETEELLGTVTNVYNSGGNDLLQVMVNHSKDAGVSGRTVWIPFVEAIVPDVDVIRREMHITPPKGLLELNLRADERSKKERRQLEWKERKKFQKRLIAAKKKLCEMEQQHVFHGFKFGENFSIRWTMTELSNAIECETLKNSLKISEECFVSNGKEETQNDIVSCKEEGLRLTSDRKTAIVLVVNEEGWEDISDIAKCGSTKNPSSLLQTLLDDAQRFAHIQYRQLVPLILVCSASRISSIQKLFLDNDYFAFDSKKVWFLEEEKLPVVGHLVEEQKWRKILMKSPWEILQSPVGSGGVMNLLLSHNLIDDIGEMGIDYVEVCSSSQNYAGMNSLLLGFLNSCKADVGIQLFENTNNDESFDMIFSIQFLKKLAKQMNKLQFYAIPNSNSHVEMVDKEWIDVEPSTANSNELRCSILSSLNICSMDKVCAIKIGE | 1677 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 11021123 | 11031620 | + | Bda026090.1 | Bda07g00948 | 9838 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda07g00948 | 1677 | SMART | pas_2 | 614 | 681 | IPR000014 | - | |
| Bda07g00948 | 1677 | SMART | pas_2 | 745 | 815 | IPR000014 | - | |
| Bda07g00948 | 1677 | ProSiteProfiles | Histidine kinase domain profile. | 890 | 1109 | IPR005467 | - | |
| Bda07g00948 | 1677 | PANTHER | TWO-COMPONENT HISTIDINE KINASE | 34 | 1114 | - | - | |
| Bda07g00948 | 1677 | SUPERFAMILY | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 950 | 1099 | IPR036890 | - | |
| Bda07g00948 | 1677 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 760 | 864 | IPR035965 | - | |
| Bda07g00948 | 1677 | Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 995 | 1104 | IPR003594 | - | |
| Bda07g00948 | 1677 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 1338 | 1674 | IPR029044 | - | |
| Bda07g00948 | 1677 | ProSiteProfiles | PAC domain profile. | 686 | 742 | IPR000700 | - | |
| Bda07g00948 | 1677 | SUPERFAMILY | GAF domain-like | 207 | 393 | - | - | |
| Bda07g00948 | 1677 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
| Bda07g00948 | 1677 | Pfam | PAS fold | 746 | 865 | IPR013767 | GO:0006355 | |
| Bda07g00948 | 1677 | Pfam | PAS fold | 615 | 730 | IPR013767 | GO:0006355 | |
| Bda07g00948 | 1677 | MobiDBLite | consensus disorder prediction | 12 | 32 | - | - | |
| Bda07g00948 | 1677 | CDD | PAS | 760 | 865 | IPR000014 | - | |
| Bda07g00948 | 1677 | Pfam | His Kinase A (phospho-acceptor) domain | 888 | 946 | IPR003661 | GO:0000155|GO:0007165 | |
| Bda07g00948 | 1677 | Pfam | PAS fold | 81 | 193 | IPR013654 | GO:0006355 | |
| Bda07g00948 | 1677 | CDD | PAS | 623 | 730 | IPR000014 | - | |
| Bda07g00948 | 1677 | Pfam | Phytochrome region | 421 | 584 | IPR013515 | GO:0006355|GO:0009584 | |
| Bda07g00948 | 1677 | ProSiteProfiles | Phytochrome chromophore attachment site domain profile. | 227 | 387 | IPR016132 | - | |
| Bda07g00948 | 1677 | SUPERFAMILY | Translation proteins | 1130 | 1224 | IPR009000 | - | |
| Bda07g00948 | 1677 | Gene3D | - | 1225 | 1313 | - | - | |
| Bda07g00948 | 1677 | ProSiteProfiles | PAS repeat profile. | 746 | 791 | IPR000014 | - | |
| Bda07g00948 | 1677 | SUPERFAMILY | GAF domain-like | 405 | 583 | - | - | |
| Bda07g00948 | 1677 | Pfam | PRC-barrel domain | 1228 | 1309 | IPR027275 | - | |
| Bda07g00948 | 1677 | SMART | gaf_1 | 227 | 407 | IPR003018 | GO:0005515 | |
| Bda07g00948 | 1677 | PANTHER | PHYTOCHROME E | 34 | 1114 | - | - | |
| Bda07g00948 | 1677 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 1326 | 1666 | IPR029044 | - | |
| Bda07g00948 | 1677 | Gene3D | RimM | 1121 | 1223 | IPR036976 | GO:0006364 | |
| Bda07g00948 | 1677 | Gene3D | PAS domain | 610 | 734 | - | - | |
| Bda07g00948 | 1677 | Gene3D | PAS domain | 759 | 871 | - | - | |
| Bda07g00948 | 1677 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 617 | 726 | IPR035965 | - | |
| Bda07g00948 | 1677 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 86 | 197 | IPR035965 | - | |
| Bda07g00948 | 1677 | SMART | HisKA_10 | 883 | 947 | IPR003661 | GO:0000155|GO:0007165 | |
| Bda07g00948 | 1677 | Hamap | Ribosome maturation factor RimM [rimM]. | 1130 | 1308 | IPR011961 | GO:0005840|GO:0006364|GO:0043022 | |
| Bda07g00948 | 1677 | PRINTS | Phytochrome signature | 142 | 164 | IPR001294 | GO:0006355|GO:0009584 | |
| Bda07g00948 | 1677 | PRINTS | Phytochrome signature | 327 | 348 | IPR001294 | GO:0006355|GO:0009584 | |
| Bda07g00948 | 1677 | PRINTS | Phytochrome signature | 615 | 631 | IPR001294 | GO:0006355|GO:0009584 | |
| Bda07g00948 | 1677 | PRINTS | Phytochrome signature | 512 | 531 | IPR001294 | GO:0006355|GO:0009584 | |
| Bda07g00948 | 1677 | PRINTS | Phytochrome signature | 545 | 563 | IPR001294 | GO:0006355|GO:0009584 | |
| Bda07g00948 | 1677 | PRINTS | Phytochrome signature | 708 | 725 | IPR001294 | GO:0006355|GO:0009584 | |
| Bda07g00948 | 1677 | PRINTS | Phytochrome signature | 728 | 748 | IPR001294 | GO:0006355|GO:0009584 | |
| Bda07g00948 | 1677 | PRINTS | Phytochrome signature | 242 | 261 | IPR001294 | GO:0006355|GO:0009584 | |
| Bda07g00948 | 1677 | PRINTS | Phytochrome signature | 427 | 447 | IPR001294 | GO:0006355|GO:0009584 | |
| Bda07g00948 | 1677 | PRINTS | Phytochrome signature | 634 | 649 | IPR001294 | GO:0006355|GO:0009584 | |
| Bda07g00948 | 1677 | Gene3D | - | 402 | 575 | IPR043150 | - | |
| Bda07g00948 | 1677 | TIGRFAM | 16S_RimM: 16S rRNA processing protein RimM | 1131 | 1308 | IPR011961 | GO:0005840|GO:0006364|GO:0043022 | |
| Bda07g00948 | 1677 | CDD | HATPase_Phy-like | 994 | 1107 | IPR044767 | - | |
| Bda07g00948 | 1677 | ProSiteProfiles | PAS repeat profile. | 612 | 683 | IPR000014 | - | |
| Bda07g00948 | 1677 | Gene3D | - | 208 | 558 | IPR029016 | - | |
| Bda07g00948 | 1677 | CDD | HisKA | 888 | 938 | IPR003661 | GO:0000155|GO:0007165 | |
| Bda07g00948 | 1677 | Pfam | RimM N-terminal domain | 1132 | 1221 | IPR002676 | GO:0006364 | |
| Bda07g00948 | 1677 | Gene3D | - | 946 | 1113 | IPR036890 | - | |
| Bda07g00948 | 1677 | Gene3D | PAS domain | 86 | 330 | - | - | |
| Bda07g00948 | 1677 | TIGRFAM | sensory_box: PAS domain S-box protein | 619 | 734 | IPR000014 | - | |
| Bda07g00948 | 1677 | SUPERFAMILY | PRC-barrel domain | 1230 | 1308 | IPR011033 | - | |
| Bda07g00948 | 1677 | Pfam | GAF domain | 227 | 396 | IPR003018 | GO:0005515 | |
| Bda07g00948 | 1677 | SMART | HKATPase_4 | 995 | 1109 | IPR003594 | - |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda07g00948 | K12123 | PHYE; phytochrome E | - | zju:107413117 | 1581.62 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda02g00015 | Bda-Chr2:920547 | Bda07g00948 | Bda-Chr7:11021123 | 2.39E-06 | dispersed | |
| Bda06g00414 | Bda-Chr6:6278738 | Bda07g00948 | Bda-Chr7:11021123 | 0 | dispersed | |
| Bda07g00948 | Bda-Chr7:11021123 | Bda11g00500 | Bda-Chr11:5316805 | 0 | dispersed | |
| Bda01g00824 | Bda-Chr1:38924388 | Bda07g00948 | Bda-Chr7:11021123 | 0 | wgd |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi10g341 | . | Blo11g00254 | . | . | . | . | Bma14g00962 | . | Cmo13g00596 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Cone6ag0918 | . | . | . | Chy12g00014 | . | . | . | . | Bda07g00948 | . | . | . | . | Sed08g2698 | . | . | . | . | Car13g00450 | . | . | Cpe20g00492 | Bhi08g02112 | Tan05g2564 | Cmetu12g2051 | Lac10g1013 | Hepe07g1807 | . | . | Cla03g00673 | Cam03g0720 | Cec03g0696 | Cco03g0732 | Clacu03g0720 | Cmu03g1311 | Cre03g1004 | Lsi02g00856 | Csa01g02270 | . | Cme12g01235 |
Syn-Families
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Bda11g01830 | . | 533 | 1712 | Histidine Kinase Gene Family | AT2G17820 | 64.8 | 0.0e+00 | 1443.7 | |
| Bda14g00969 | . | 504 | 1648 | Histidine Kinase Gene Family | AT2G17820 | 64.8 | 0.0e+00 | 1357.0 | |
| Bda13g00598 | . | 305 | 1278 | Histidine Kinase Gene Family | AT2G01830 | 51.7 | 1.5e-270 | 929.5 | |
| Bda06g00425 | . | 197 | 1076 | Histidine Kinase Gene Family | AT2G01830 | 53.3 | 6.4e-250 | 860.9 | |
| Bda01g00649 | . | 1 | 1022 | Histidine Kinase Gene Family | AT5G10720 | 54.8 | 3.5e-284 | 974.5 | |
| Bda01g01665 | . | 2 | 1120 | Histidine Kinase Gene Family | AT1G09570 | 76.8 | 0.0e+00 | 1753.0 | |
| Bda06g00414 | . | 12 | 1121 | Histidine Kinase Gene Family | AT1G09570 | 55.2 | 0.0e+00 | 1250.7 | |
| Bda11g00500 | CCT | 29 | 1120 | Histidine Kinase Gene Family | AT1G09570 | 53.0 | 0.0e+00 | 1164.1 | |
| Bda01g00824 | . | 36 | 875 | Histidine Kinase Gene Family | AT1G09570 | 54.3 | 2.6e-265 | 912.1 | |
| Bda08g00333 | CCT | 1 | 680 | Histidine Kinase Gene Family | AT1G09570 | 52.1 | 6.9e-202 | 701.4 | |
| Bda11g00500 | CCT | 30 | 1061 | Histidine Kinase Gene Family | AT2G18790 | 76.6 | 0.0e+00 | 1604.0 | |
| Bda07g00948 | . | 15 | 1045 | Histidine Kinase Gene Family | AT2G18790 | 58.5 | 0.0e+00 | 1223.8 | |
| Bda01g00824 | . | 15 | 877 | Histidine Kinase Gene Family | AT2G18790 | 66.0 | 0.0e+00 | 1152.9 | |
| Bda06g00414 | . | 23 | 1076 | Histidine Kinase Gene Family | AT2G18790 | 53.5 | 0.0e+00 | 1114.8 | |
| Bda01g01665 | . | 22 | 1055 | Histidine Kinase Gene Family | AT2G18790 | 51.0 | 1.0e-306 | 1049.7 | |
| Bda08g00333 | CCT | 1 | 616 | Histidine Kinase Gene Family | AT2G18790 | 73.8 | 3.0e-269 | 925.2 | |
| Bda06g00414 | . | 10 | 1119 | Histidine Kinase Gene Family | AT5G35840 | 62.6 | 0.0e+00 | 1400.6 | |
| Bda11g00500 | CCT | 21 | 1122 | Histidine Kinase Gene Family | AT5G35840 | 51.5 | 0.0e+00 | 1123.6 | |
| Bda01g01665 | . | 10 | 1115 | Histidine Kinase Gene Family | AT5G35840 | 50.5 | 0.0e+00 | 1103.6 | |
| Bda01g00824 | . | 40 | 871 | Histidine Kinase Gene Family | AT5G35840 | 52.1 | 1.1e-255 | 880.2 | |
| Bda11g00500 | CCT | 30 | 1122 | Histidine Kinase Gene Family | AT4G16250 | 74.1 | 0.0e+00 | 1639.0 | |
| Bda07g00948 | . | 36 | 1107 | Histidine Kinase Gene Family | AT4G16250 | 57.5 | 0.0e+00 | 1250.0 | |
| Bda06g00414 | . | 24 | 1118 | Histidine Kinase Gene Family | AT4G16250 | 52.2 | 0.0e+00 | 1135.6 | |
| Bda01g00824 | . | 35 | 875 | Histidine Kinase Gene Family | AT4G16250 | 64.7 | 0.0e+00 | 1115.9 | |
| Bda08g00333 | CCT | 1 | 676 | Histidine Kinase Gene Family | AT4G16250 | 71.4 | 7.2e-287 | 983.8 | |
| Bda07g00948 | . | 14 | 1108 | Histidine Kinase Gene Family | AT4G18130 | 60.6 | 0.0e+00 | 1332.0 | |
| Bda11g00500 | CCT | 38 | 1116 | Histidine Kinase Gene Family | AT4G18130 | 58.4 | 0.0e+00 | 1252.7 | |
| Bda01g00824 | . | 14 | 871 | Histidine Kinase Gene Family | AT4G18130 | 68.5 | 0.0e+00 | 1168.7 | |
| Bda08g00333 | CCT | 1 | 677 | Histidine Kinase Gene Family | AT4G18130 | 54.3 | 1.6e-211 | 733.4 |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0021256 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 |
Transcriptome
| Select | Gene | Chr | Type | da1 | da2 | da3 | da4 | da5 | da6 | da7 | da8 | da9 | da10 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Bda07g00948 | Bda_Chr07 | FPKM | 1.974529 | 1.884155 | 0.40603 | 0.676281 | 13.979297 | 14.361916 | 17.390211 | 0.226202 | 0.335085 |