Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00956 ATGGAGTCGACGATCCCCGTCAGGTTCGGGTTAGGGAGGCAGTCGTCTTTGGCGCCGGACAAGCACATAGGAGAAACGGATGAGCTGGAAGACGCGGAAATGATAGATCCTGGCGTGAAACTTATGTATTTGGCTAATGAAGGTGATCTTGAAGGAATCTCGGAGCTTTTGGATTCTGGAACCGACGTCAATTTCCGCGATATTGATGGCCGGACGGCTCTCCATATTTCAGCATGCCAGGGATATTCTGACGTCGTTGATTTGTTGCTTCAAAGAGGAGCTGAGGTTGACCCTAAAGATCGCTGGGGTAGCACGCCTCTTGCAGATGCCATTCACTACAAAAACCATAATGTGATTCAATTGTTGGAGAAACATGGTGCAAAACACCTGATGGCTCCAATGCATGTAAACCATGCTCGCGAAGTACCCGAATATGAAATTGATCCGAAAGAGATTGATTTTACAAACAGTGTTGATATAACCAAGGGAACATTTCGTATAGCATCATGGCGTGGCATAGAAGTTGCTGTAAAAACTTTTGAGGAGGATGTGATTGATGACGAGGATAAAGTGAGGGCATTTCGGGACGAGCTTGCACTTCTTCAGAAGTTGAGACATCCGAACGTTGTACAGTTTCTAGGTGCAGTGACTCAGAGTAGCCCAATGATGATTGTTACAGAATATTTACCCAAGGGAGATCTTTCCGAATTCTTGAGAAAGAACGGAGCATTAAAACCAATAGTTGCTGTTAGATTTGCCCTTGATATTGCCAGGGGAATGAGTTACCTGCATGAGAATAAGCCTGCACCAATAATTCACTGTGATCTTGAGCCTTCAAATATATTGCGGGATGACTCTGGGCATTTGAAAGTCGCAGATTTTGGAATTAGCAAGCTGTTGACAGTTAAAGAAAATAAGCCTCTAACATGCCAAGTCACTTCCCGCCGTTATGTGGCTCCAGAGGTTTTCAAAAATGATGGGTACGATACAAAGGTGGACGTGTTCTCATTTGCTTTAATTCTACAGGAGATGATTGAAGGCTGCCCACCATTTTCCGCTAAGAAAGAAAATGAAGTTCCAGAAGCATATGCTGCAGGAGAACGTCCACCTTTCAAAGCCCCGTCTAAACATTACGCTCATGGACTTAGAGAGCAGATTGAGGAGTGCTGGAATGAGAATCCAGCCGACAGACCAACTTTTAGGCAGATAATAAGAAGGCTGGAATCCATCTCTTACAGTCTTGGTCACAAGAGGCGTTGGAAGGTTAGACCATTGAAATGCTTTCTAAATCCAATCAGTGATTCCTCTTCTTCAGCCTCAAGCAGCTAA 1329 44.47 MESTIPVRFGLGRQSSLAPDKHIGETDELEDAEMIDPGVKLMYLANEGDLEGISELLDSGTDVNFRDIDGRTALHISACQGYSDVVDLLLQRGAEVDPKDRWGSTPLADAIHYKNHNVIQLLEKHGAKHLMAPMHVNHAREVPEYEIDPKEIDFTNSVDITKGTFRIASWRGIEVAVKTFEEDVIDDEDKVRAFRDELALLQKLRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLSEFLRKNGALKPIVAVRFALDIARGMSYLHENKPAPIIHCDLEPSNILRDDSGHLKVADFGISKLLTVKENKPLTCQVTSRRYVAPEVFKNDGYDTKVDVFSFALILQEMIEGCPPFSAKKENEVPEAYAAGERPPFKAPSKHYAHGLREQIEECWNENPADRPTFRQIIRRLESISYSLGHKRRWKVRPLKCFLNPISDSSSSASSS 442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11072390 11077041 - Bda026098.1 Bda07g00956 9846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00956 442 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 433 - -
Bda07g00956 442 Pfam Protein tyrosine and serine/threonine kinase 160 407 IPR001245 GO:0004672|GO:0006468
Bda07g00956 442 ProSiteProfiles Ankyrin repeat region circular profile. 69 101 - -
Bda07g00956 442 Gene3D Phosphorylase Kinase; domain 1 146 229 - -
Bda07g00956 442 SUPERFAMILY Ankyrin repeat 40 129 IPR036770 -
Bda07g00956 442 PIRSF ILK 2 429 - -
Bda07g00956 442 Gene3D - 13 145 IPR036770 -
Bda07g00956 442 ProSiteProfiles Ankyrin repeat profile. 69 101 IPR002110 GO:0005515
Bda07g00956 442 SUPERFAMILY Protein kinase-like (PK-like) 165 410 IPR011009 -
Bda07g00956 442 Gene3D Transferase(Phosphotransferase) domain 1 230 423 - -
Bda07g00956 442 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 9 433 - -
Bda07g00956 442 Pfam Ankyrin repeats (3 copies) 41 128 IPR002110 GO:0005515
Bda07g00956 442 SMART ANK_2a 69 98 IPR002110 GO:0005515
Bda07g00956 442 SMART ANK_2a 102 131 IPR002110 GO:0005515
Bda07g00956 442 SMART ANK_2a 37 65 IPR002110 GO:0005515
Bda07g00956 442 CDD STKc_MAP3K-like 168 407 - -
Bda07g00956 442 ProSiteProfiles Protein kinase domain profile. 119 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00956 Bda-Chr7:11072390 Bda11g01201 Bda-Chr11:12338750 2.23E-105 dispersed
Bda14g00424 Bda-Chr14:3071105 Bda07g00956 Bda-Chr7:11072390 4.18E-16 transposed
Bda14g01502 Bda-Chr14:23256427 Bda07g00956 Bda-Chr7:11072390 9.97E-96 transposed
Bda15g00444 Bda-Chr15:7493005 Bda07g00956 Bda-Chr7:11072390 1.69E-127 transposed
Bda01g00835 Bda-Chr1:39892730 Bda07g00956 Bda-Chr7:11072390 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69715 PF07714 PK_Tyr_Ser-Thr 6.90E-54 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00956 - - tcc:18596602 691.034