Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00964 ATGATGTCAAAATCGTACACCAATCTTTTAGATCTAGCTTCTGGTAATTTTCCAGTAATGGGTCGCGAGAAAAAGCGACTTTCTCGAGTGATGACTGTTCCTGGGATTATATCGGAGCTTGACGATGATCAGGCCAACAGTGTGACCTCAGACGTTCCATCTTCCATTTTTCAGGACCGTATAATTATTGTTGGCAATCAGCTTCCTGTAAAAGCTAAACGAAGACCAGATAATAAGGGTTGGAGTTTCAGCTGGGATGAGGATTCATTGCTGTTACAGCTCAAGGATGGCTTACCTGAAGATATGGAGGTCTTATATGTTGGCTCTTTGAAAGTGGATGTAGATTCAAATGAGCAAGATGACGTTTCACAGATTTTATTGGAGAGGTTTAAGTGTGTTCCAGCTTTTTTACCTTCTGACATTTTGTCAAAGTTCTATCATGGATTTTGTAAGCAGCATTTATGGCCACTTTTCCATTATATGCTTCCTATTTCGGCTGATCATGGTGGACGATTTGATCGGTCTTTGTGGGAAGCGTATGTCGCAGCAAATAAGATTTTTTCGCAAAGGGTGATTGAAGTTATTAACCCAGATGATGACTACGTATGGATCCATGATTATCATTTAATGGTGCTTCCTACCTTCTTGAGGAGGAGGTTTAATAGATTGAGAATGGGATTTTTTCTTCACAGTCCATTTCCATCATCAGAGATATACCGGACATTACCCGTGAGAGAAGAGATTCTCAAGGCTCTTTTAAATTCAGACCTTATTGGTTTCCACACTTTCGACTATGCTCGACATTTCCTCTCTTGCTGTAGTCGGATGTTAGGATTAGAGTATCAATCAAAAAGAGGCTATATTGGTTTGGAATACTATGGTAGAACTGTCGGGATTAAGATCATGCCGGTTGGAATTCATATGGGCCAGATTGAGTCAGTGTTGAGACAGGCAGACAAGGAGTGGAGGTTAAGGGAGCTGAAACAACAGTTTGAAGGGAAAACTATCTTGCTTGGAGTGGATGATATGGACATCTTTAAAGGTGTCAATCTGAAGTTGTTGGCAATGGAGCAAATGCTGAAACAGCATCCCAAGTGGCAGGGAAAGGCCGTGCTTGTGCAGATTGCAAATCCTGCTAGAGGAGGTGGAAAAGATCTAGTTGAAATACAGGATGAAATTGAGGCTAGCTGCAAGAGAATTAACGATCGTTTTCGACAAAAAAATTACGAACCAATAATTTTCATCGATAGGCCAGTTTCTCTCAGTGAAAGAGCGGCTTATTACACCGTCGCCGAGTGTGTGGTAGTCACAGCTGTGAGGGATGGAATGAATCTAACACCTTATGAGTATATTCTCTGCAGACAGGGAATTTCTGGATCGAATATTAACCCCGAATCGAGTGGGCCCAAGAAGAGCATGCTGGTGGCATCAGAGTTTCTCGGATGTTCTCCTTCACTGAGCGGTGCAATTCGAATCAATCCGTGGAATATTGAAACAACTGCTGAGGCGATGAACGAGGCAATATCAATGGCTGATGCTGAGAAGCACTTACGCCATGAGAAGCATTATAGGTACATTAGTACCCATGATGTATCGTACTGGTCGAAGAGCTTTTTCCAAGACATGGAGAGGACATGTAAGGACCATTTTAGAAAACGTTGCTGGGGAATTGGTTTGGGGTTTGGATTTAGAGTTGTTGCTCTAGATCCTAATTTCAGGAAACTATCCATTGATGTCATTGTGTCTGCATATTCAAAGTCGAAAAACAGGGCAATCTTATTGGATTATGATGGAACTGTCATGCCCCAAACGTCAATCAATAAGGCTCCAAGTCAGGAGGTCATCTCCATCATAAATACGCTCTGCGGTGACGATAAAAATACTGTTTTTGTTGTCAGCGGAAGAGGAAGACAGAGTTTAAGCAGATGGTTTTCTTCATGTCAAAAGCTAGGAATTGCTTCTGAGCATGGCTATTTCATGAGGTGGTCTGCGGAGGATGATTGGGAAAATTGTGGCCAAACAACTGATTTTGATTGGATACAAATGGCTGAGCCAGTTATGCAATTATACACTGACGCAACAGATGGTTCATCTATTGAAACCAAGGAAAGTGCTCTGGTTTGGCACCATCAAGATGCGGATCCTGGTTTTGGGTCAAGTCAAGCCAAAGAACTGTTGGACCACCTTGAAAGCGTATTGGCCAATGAGCCAGTAACTGTTAAAAGCGGCCAATTCATCGTCGAAGTAAAGCCACAGGTAGAACGATGTTTACTCATTTTACTTTATTATTGTTGGGATTGTTTTTTTCTCTTTCAGGGTGTGAGTAAAGGTTCAGTTGCAGAAAAGATCTTCACATCCATGGCGGAAAATGGAAGACAGGCAGATTTCGTTCTTTGCATTGGTGATGATCGATCTGATGAAGACATGTTTGAGATCATCGAAAGCGCATTCAATAATGGAGTCCTCTCCTCTAAGACGCTTGTTTTTGCCTGCACGGTTGGACAAAAACCGAGCAAAGCAAAATACTATTTAGACGATACAACTGAAGGTCTTAACAATGCTCGAGGCCTTGGCCGAAACTTCACGTTCTCCGTCCTCCTCAGCATACTCCCCTTGAAAATAGCTCAAGTTTTTTCGGGTAAAGTGGATTGA 2652 42.16 MMSKSYTNLLDLASGNFPVMGREKKRLSRVMTVPGIISELDDDQANSVTSDVPSSIFQDRIIIVGNQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVLYVGSLKVDVDSNEQDDVSQILLERFKCVPAFLPSDILSKFYHGFCKQHLWPLFHYMLPISADHGGRFDRSLWEAYVAANKIFSQRVIEVINPDDDYVWIHDYHLMVLPTFLRRRFNRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNSDLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRQADKEWRLRELKQQFEGKTILLGVDDMDIFKGVNLKLLAMEQMLKQHPKWQGKAVLVQIANPARGGGKDLVEIQDEIEASCKRINDRFRQKNYEPIIFIDRPVSLSERAAYYTVAECVVVTAVRDGMNLTPYEYILCRQGISGSNINPESSGPKKSMLVASEFLGCSPSLSGAIRINPWNIETTAEAMNEAISMADAEKHLRHEKHYRYISTHDVSYWSKSFFQDMERTCKDHFRKRCWGIGLGFGFRVVALDPNFRKLSIDVIVSAYSKSKNRAILLDYDGTVMPQTSINKAPSQEVISIINTLCGDDKNTVFVVSGRGRQSLSRWFSSCQKLGIASEHGYFMRWSAEDDWENCGQTTDFDWIQMAEPVMQLYTDATDGSSIETKESALVWHHQDADPGFGSSQAKELLDHLESVLANEPVTVKSGQFIVEVKPQVERCLLILLYYCWDCFFLFQGVSKGSVAEKIFTSMAENGRQADFVLCIGDDRSDEDMFEIIESAFNNGVLSSKTLVFACTVGQKPSKAKYYLDDTTEGLNNARGLGRNFTFSVLLSILPLKIAQVFSGKVD 883
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11509105 11512806 - Bda026105.1 Bda07g00964 9854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00964 883 CDD GT20_TPS 60 543 IPR001830 GO:0003824|GO:0005992
Bda07g00964 883 Pfam Trehalose-phosphatase 593 753 IPR003337 GO:0003824|GO:0005992
Bda07g00964 883 Pfam Trehalose-phosphatase 772 847 IPR003337 GO:0003824|GO:0005992
Bda07g00964 883 Pfam Glycosyltransferase family 20 60 543 IPR001830 GO:0003824|GO:0005992
Bda07g00964 883 CDD HAD_TPP 591 847 - -
Bda07g00964 883 Gene3D Glycogen Phosphorylase B; 314 527 - -
Bda07g00964 883 Gene3D Glycogen Phosphorylase B; 53 313 - -
Bda07g00964 883 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 547 - -
Bda07g00964 883 Gene3D - 673 752 - -
Bda07g00964 883 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 592 814 IPR006379 -
Bda07g00964 883 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 7-RELATED 772 850 - -
Bda07g00964 883 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 7-RELATED 1 753 - -
Bda07g00964 883 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 772 850 IPR001830 GO:0003824|GO:0005992
Bda07g00964 883 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 753 IPR001830 GO:0003824|GO:0005992
Bda07g00964 883 Gene3D - 592 672 IPR023214 -
Bda07g00964 883 Gene3D - 773 844 IPR023214 -
Bda07g00964 883 SUPERFAMILY HAD-like 590 853 IPR036412 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g01263 Bda-Chr6:43148054 Bda07g00964 Bda-Chr7:11509105 0 dispersed
Bda07g00964 Bda-Chr7:11509105 Bda07g01593 Bda-Chr7:29562641 0 dispersed
Bda07g00964 Bda-Chr7:11509105 Bda08g00635 Bda-Chr8:6534025 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00964 K16055 - rcu:8275177 1509.58