Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00967 ATGGCGGATTCGAGACCAAGAAGACTGAGAGGGCATACAGCGACTGCAACGTGCTGCATCGCCTCGAGGGACCGCCCTGGTCTAGTCGCTACTTCCGGTGAGGATGGCTGTGTTTGCTGGTTTGATATGCGATGCAAAGATGCTGTATGCATTATGGATATTTCAAAGGAGCCTATTTCATCTCTTTGTTTCAAACAAGGGAATGAAAATATCATTTATGTATCGACTGGAAAAGAAGTCAAATCTTTTGATGTGCATCAGGTTACCTCATGGAAACCGTTGGAAACTTATAATTTCAATAAAGAGGAGATAAATCAGGTTGCATGTGGTTCCAAGTCTTCTTTTCTGGCTGCAGCTGATGATGGGGGTGATGTTAAGATCATTGATATACAACAACACTGCGTTTATAAAACGTTAAGAGCTGGCCATACAAGTATTTGTAGCAGTGTTCAATTTCTTTCTTGGAGACCTTGGGAAGTTATTACTGGAGGTCTAGATTCGAAGCTCATTATGTGGGACTTCTCCAGAGGGCGCCCTTATAAGACGATGGATTTTGGTTGGTACAGTGTTTGTTTTCTCTGCTATATATATATTTTTTCTTTTTATGGTTCTGATTTGTACGAGTTCTTTATGGGTTTCTGTGCTGAATTTTGTTTGGTGAACTTCAGTTCCATTGATGGACTCCTCCCAACCGGAACATTCCTTCAAATTCCCGCAATTTTTCAAATTCCTTTCCTTTCCCAGAACTTGAACATCGACGTTGCTTCTATGAAAATGATGGAGGCGGCGGCTCCATTGTGCCACAACTGCGGTGAGCAAGTTGGGTTTGATAAACATGGAGAGATTTTTGTCGCCTGCAATGACTGCAATTTTCCCATTTGCAAAATTTGTGTGGAGTTCGAGATCAAGGAAGGCCGTGATGGTGGAATTCATGCTAGACATGTTAGTAGTGTGTCAACTGTCGAAAGTGAAATAAATGATGAGTCAGGTAACCCAATATGGAAGAACAGAGTGGAGAGTTGGAAGGACAAGAAGAATAAGAAGAAAAATACTGCTGTAACTAAGGCTGAAATAAATAAAGAGGCTCAAATTCCTTCTCAACAGCAAATGGAAGAGAAAGAGGCATTGGAGGCTGGGCAACCACTTTCAACCATTATTCCCATTCCATCCACTAAACTAACGCCTTATAGAATTGTGATCGCGATGCGATTGATCATTCTGGCTCTTTTCTTCCATTATAGAGTTACAAATCCCGTCGACAGTGCATTTGGTCTATGGCTCACTTCTATTATATGTGAGATATGGTTTGCTGTCTCTTGGGTGTTAGATCAGTTCCCTAAATGGTATCCTATCAATAGGGAGACATTCATTGATAGGCTATCAGAAAGATTTGAAAGAGAGGGTGAGATCTCTGAGCTTGCTGCTGTGGATTTCTTCGTGAGTACAGTCGACCCCTTGAAAGAACCACCGCTTATCACTGCCAATACTGTGCTTTCTATCCTTGCTGTGGACTACCCTGTTGATAAAGTTTCCTGCTATGTATCTGATGATGGCGCTGCGATGCTTACATTTGAATCACTCGTCGAAACATCTGACTTTGCTAGGAAGTGGGTTCCATTCTGCAAGAAATTTTCCATTGAACCTCGTGCACCAGAGTTCTACTTTTCGCAGAAGATTGACTATTTGAAGGATAAAGTGCAGCCTTCATTTGTGAAGGAACGCAGAGCTATGAAAAGAGATTATGAAGAGTTCAAAGTCCGAATCAATGCTTTAGTAGCAAAAGCTCAGAAAACACCAGATGAAGGCTGGACAATGCAAGACGGCACACCTTGGCCTGGAAATAACACCCGTGATCACCCTGGGATGATTCAGGTTTTTCTTGGCAATACCGGAGCCCATGACCTTGATGTAAGAGTATCTGCAGTTCTGACAAATGCTCCTTACATTCTCAATCTTGATTGTGATCACTATGTCAACAATAGTAAGGCAATTAGGGAGGCAATGTGTTTCTTGATGGACCCACAAGTTGGTCGGGATCTTTGCTATGTGCAGTTTCCTCAGAGATTTGATGGCATCGATCGCAGTGACAGATATGCCAATCGCAACACTGTTTTCTTTGATGTTAACATGAAAGGATTGGACGGCATTCAGGGACCGGTTTATGTTGGTACTGGTTGCGTATTCAACAGGCAAGCTCTTTATGGTTACGGGCCTCCTTCTATGCCTAGCTTACCCAAGGCCTCCTCCTCATCTTGCTCATGGTGTGGCTGCTGCTCTTGTTGCTGCCCCTCGAAGAAGCCCTCAAAAGATGTCAACCAAGTTTATCGAGATGCAAAACGAGAAGAGCTTGATGCTGCAATCTTTAACCTCCGAGAAATCGATAATTATGATGAATATGAGAGGTCAATGCTGATCTCCCAAATGAGCTTTGAGAAGACATTTGGCTTATCTTCTGTATTCATCGAGTCTACAATTATGGAAAACGGAGGCGTGGCTGAATCTGCTAACCCGTCAACGTTGATCAAAGAAGCAATTCATGTTATTAGTTGTGGTTATGAAGAGAAGACAGCTTGGGGAAAAGAGATTGGTTGGATATATGGTTCAGTCACTGAGGATATTCTCTCAAACTTGGCAAGCCTCCTGTTTCTTGGCCTCTTCATCTCCATCATCCTCACAAGTGTTCTTGAGTTGCGATGGAGTGGGGTCAGCATCGAGGATTTGTGGCGAAACGAGCAATTCTGGGTCATTGGAGGCGTGTCGGCTCATCTCTTTGCCGTCTTTCAAGGATTTCTGAAGATGTTGGCCGGAATCGACACCAATTTCACTGTCACTGCAAAGGCTGCCGATGATACTGAATTTGGAGAGCTGTACATGGTAAAATGGACGACCCTTTTGATTGTTCCAACAACTCTGCTCATCGTCAACATGGTTGGTGTTGTGGCTGGATTCTCTGATGCTCTCAATGGAGGATATGAAGCTTGGGGCCCACTTTTCGGAAAGGTGTTTTTCGCTTTCTGGGTCATTTTCCATCTTTATCCGTTCCTCAAAGGTCTCATGGGTCGTCAAAATCGAACTCCAACAATTGTTGTTCTGTGGTCGGTCCTGTTGGCATCCGTCTTCTCGCTCATCTGGGTCAAGATCGATCCGTTTGTGAGTAAAGTTGACAGTACAACCATAGCTCAGAGCTGTATTTCCATCGATTGTTAA 3207 43.37 MADSRPRRLRGHTATATCCIASRDRPGLVATSGEDGCVCWFDMRCKDAVCIMDISKEPISSLCFKQGNENIIYVSTGKEVKSFDVHQVTSWKPLETYNFNKEEINQVACGSKSSFLAAADDGGDVKIIDIQQHCVYKTLRAGHTSICSSVQFLSWRPWEVITGGLDSKLIMWDFSRGRPYKTMDFGWYSVCFLCYIYIFSFYGSDLYEFFMGFCAEFCLVNFSSIDGLLPTGTFLQIPAIFQIPFLSQNLNIDVASMKMMEAAAPLCHNCGEQVGFDKHGEIFVACNDCNFPICKICVEFEIKEGRDGGIHARHVSSVSTVESEINDESGNPIWKNRVESWKDKKNKKKNTAVTKAEINKEAQIPSQQQMEEKEALEAGQPLSTIIPIPSTKLTPYRIVIAMRLIILALFFHYRVTNPVDSAFGLWLTSIICEIWFAVSWVLDQFPKWYPINRETFIDRLSERFEREGEISELAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLTFESLVETSDFARKWVPFCKKFSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEFKVRINALVAKAQKTPDEGWTMQDGTPWPGNNTRDHPGMIQVFLGNTGAHDLDVRVSAVLTNAPYILNLDCDHYVNNSKAIREAMCFLMDPQVGRDLCYVQFPQRFDGIDRSDRYANRNTVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYGPPSMPSLPKASSSSCSWCGCCSCCCPSKKPSKDVNQVYRDAKREELDAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSSVFIESTIMENGGVAESANPSTLIKEAIHVISCGYEEKTAWGKEIGWIYGSVTEDILSNLASLLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGIDTNFTVTAKAADDTEFGELYMVKWTTLLIVPTTLLIVNMVGVVAGFSDALNGGYEAWGPLFGKVFFAFWVIFHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLIWVKIDPFVSKVDSTTIAQSCISIDC 1068
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11564351 11575077 + Bda026110.1 Bda07g00967 9857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00967 1068 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 628 738 IPR029044 -
Bda07g00967 1068 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 260 311 - -
Bda07g00967 1068 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 318 636 - -
Bda07g00967 1068 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 873 1068 - -
Bda07g00967 1068 SUPERFAMILY RING/U-box 257 307 - -
Bda07g00967 1068 Pfam Cellulose synthase 630 875 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bda07g00967 1068 Pfam Zinc-binding RING-finger 262 306 IPR027934 -
Bda07g00967 1068 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 8 [UDP-FORMING] 637 875 - -
Bda07g00967 1068 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 8 [UDP-FORMING] 260 311 - -
Bda07g00967 1068 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 8 [UDP-FORMING] 318 636 - -
Bda07g00967 1068 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 8 [UDP-FORMING] 873 1068 - -
Bda07g00967 1068 SMART WD40_4 90 129 IPR001680 GO:0005515
Bda07g00967 1068 SMART WD40_4 132 173 IPR001680 GO:0005515
Bda07g00967 1068 SMART WD40_4 47 84 IPR001680 GO:0005515
Bda07g00967 1068 SMART WD40_4 2 42 IPR001680 GO:0005515
Bda07g00967 1068 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 637 875 - -
Bda07g00967 1068 SUPERFAMILY WD40 repeat-like 7 205 IPR036322 GO:0005515
Bda07g00967 1068 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 251 314 IPR013083 -
Bda07g00967 1068 Gene3D - 2 190 IPR015943 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00967 Bda-Chr7:11564351 Bda11g00940 Bda-Chr11:9195821 1.22E-08 dispersed
Bda07g00967 Bda-Chr7:11564351 Bda03g00065 Bda-Chr3:718275 3.57E-09 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00967 K10999 - tcc:18596653 1033.48