Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00980 TCTCTCATGGCTGAGGTAGAAGCCAATCAAGATCATGCGCAAGGAATTAAGCTCTTTGGGAAAACAATCACGTTGCATGATAAGCAAGTAAAGGACGGAGACAAAAGGGATGATGATCAGACGGCGGAGAAGAGGCCAGAAAAGATCATCCCTTGCCCTAGATGCAAGAGCATGGAGACTAAGTTCTGTTACTTCAACAACTATAACGTAAACCAGCCTAGACATTTCTGCAAGGGCTGCCAGAGATACTGGACGGCCGGAGGAGCTCTCCGGAACGTTCCCATCGGAGCTGGTCGCCGGAAAGCAAAACCACCTTGTCAAAACACCATAGGTGGGTTGCCGGTGAGTTACCTTCATGACCCCTCTTCGGTGGCCGTGCACCAGTTTCAGTTAGATGAGGTGGTGGAGGATTGGAAAGTAATGATCAGCCATGGTAGTTTCGGGCAAGCTTTGCCGGTGAAGAGGCGGAGGGACGGCTGTGGAGGTCAAACTTGTTGA 498 50.6 SLMAEVEANQDHAQGIKLFGKTITLHDKQVKDGDKRDDDQTAEKRPEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKAKPPCQNTIGGLPVSYLHDPSSVAVHQFQLDEVVEDWKVMISHGSFGQALPVKRRRDGCGGQTC 165
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11642620 11643117 + Bda026125.1 Bda07g00980 9870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00980 165 ProSiteProfiles Zinc finger Dof-type profile. 50 104 IPR003851 GO:0003677|GO:0006355
Bda07g00980 165 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 10 162 - -
Bda07g00980 165 PANTHER CYCLIC DOF FACTOR 2 10 162 IPR045174 GO:0003700|GO:0006355
Bda07g00980 165 Pfam Dof domain, zinc finger 48 103 IPR003851 GO:0003677|GO:0006355
Bda07g00980 165 ProSitePatterns Zinc finger Dof-type signature. 52 88 IPR003851 GO:0003677|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g00980 Bda09g00803 CCT
Bda02g00030 Bda07g00980 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00980 Bda-Chr7:11642620 Bda09g00808 Bda-Chr9:15672814 2.40E-54 dispersed
Bda02g00030 Bda-Chr2:1393842 Bda07g00980 Bda-Chr7:11642620 2.12E-53 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16140 PF02701 zf-Dof 5.80E-32 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00980 - - zju:107410557 229.18