Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda07g00980 | TCTCTCATGGCTGAGGTAGAAGCCAATCAAGATCATGCGCAAGGAATTAAGCTCTTTGGGAAAACAATCACGTTGCATGATAAGCAAGTAAAGGACGGAGACAAAAGGGATGATGATCAGACGGCGGAGAAGAGGCCAGAAAAGATCATCCCTTGCCCTAGATGCAAGAGCATGGAGACTAAGTTCTGTTACTTCAACAACTATAACGTAAACCAGCCTAGACATTTCTGCAAGGGCTGCCAGAGATACTGGACGGCCGGAGGAGCTCTCCGGAACGTTCCCATCGGAGCTGGTCGCCGGAAAGCAAAACCACCTTGTCAAAACACCATAGGTGGGTTGCCGGTGAGTTACCTTCATGACCCCTCTTCGGTGGCCGTGCACCAGTTTCAGTTAGATGAGGTGGTGGAGGATTGGAAAGTAATGATCAGCCATGGTAGTTTCGGGCAAGCTTTGCCGGTGAAGAGGCGGAGGGACGGCTGTGGAGGTCAAACTTGTTGA | 498 | 50.6 | SLMAEVEANQDHAQGIKLFGKTITLHDKQVKDGDKRDDDQTAEKRPEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKAKPPCQNTIGGLPVSYLHDPSSVAVHQFQLDEVVEDWKVMISHGSFGQALPVKRRRDGCGGQTC | 165 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 11642620 | 11643117 | + | Bda026125.1 | Bda07g00980 | 9870 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda07g00980 | 165 | ProSiteProfiles | Zinc finger Dof-type profile. | 50 | 104 | IPR003851 | GO:0003677|GO:0006355 | |
Bda07g00980 | 165 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.5-LIKE | 10 | 162 | - | - | |
Bda07g00980 | 165 | PANTHER | CYCLIC DOF FACTOR 2 | 10 | 162 | IPR045174 | GO:0003700|GO:0006355 | |
Bda07g00980 | 165 | Pfam | Dof domain, zinc finger | 48 | 103 | IPR003851 | GO:0003677|GO:0006355 | |
Bda07g00980 | 165 | ProSitePatterns | Zinc finger Dof-type signature. | 52 | 88 | IPR003851 | GO:0003677|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda07g00980 | Bda09g00803 | CCT | |
Bda02g00030 | Bda07g00980 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g00980 | Bda-Chr7:11642620 | Bda09g00808 | Bda-Chr9:15672814 | 2.40E-54 | dispersed | |
Bda02g00030 | Bda-Chr2:1393842 | Bda07g00980 | Bda-Chr7:11642620 | 2.12E-53 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16140 | PF02701 | zf-Dof | 5.80E-32 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda07g00980 | - | - | zju:107410557 | 229.18 |