Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g00992 ATGGCTCCGGCAGGTACTAGACGGCCGAGGCGGCCATTGTTGACTCAAACTCTGAATCTTTCTCAAGTGTTTCTGGATGAAATGTATGTTGGATTTACTGCTTCAACTGGGCAGCTAGTTGAAAGTCATAAAGTTTTAGCCTGGAGTTTCAGTAATTCGAATTCTTCTCTAAGCGAGAGTTTGATGACTACTGGTTTGCCTTCCTTCGTTCTTCCTAACGACCCAACTGATAAATCCAAATGGTTTATCGTAGGATTTACTGTGGGTGGTTTCCTTCTGATTTGTTCTTGTGTTATAATTTCCTATCTGACGATCGCAAGGTGTTTGCGAAATGCCAAAGAGAGAAGGGAGAGGGAAGACTGGGAGCTGGAGTACTGGCCGCACAGGATTTCCTATCGCGAAATTGAAAAATCAACGAAGGGATTCAAAGAAGAGAATGTGATCGGAGTTGGAGGAAATGGGAAGGTTTACAAGGGAGTTTTAGCCGGAGGGGCCGAGATTGCAGTGAAGCGAATTTCGACGGAAAACGATGGGATGAGAGAGTTCTTAGCTGAAATTTCGAGCATTGGAAGATTGAAGCACAGAAATTTGGTTGGCTTAAAAGGATGGTGTAAAAGAGAGAAAGGAACCTTTATGTTAATCTACGATTACATGGAGAACGGAAGCTTAGACAAGAAGATCTTCGAGCCCGAAACGAGCAAGATGCTAAAATTCGACGAGCGGATAAGAATTCTCAAAGAAGTAGCTTCTGCGGTTTTGTATTTACACGAAGGGTGGGATGCTCAAGTTTTGCACAGAGACATTAAAGCCAGCAATGTCCTACTCGACAAGGACATGAACGGAAGGCTCGGAGATTTCGGGTTGGCTCGAGTCCATGGCCACAGCCAAGTGACTAGCACAACGAAAGTGGTCGGGACGGTTGGGTACTTGGCCCCGGAAGTGATTAAAAGCGGCCGAGCCTCGACTCAGACGGATGTATTTGGGTTTGGAGTATTGATTTTGGAAGTAATGTGTGGAAGGAGGCCAATTGAAGAAGGAAAGCCTCCATTGGTACAATGGGTGTGGGAGATGATTGAAAAAGACCAATTATCAAATGCTTTGGATGAAAAAATGAGGAACTTTGATAGCAATTTCAACAAAGAAGAGACTGAGAAGGCACTTCACTTAGGCCTGCTTTGCGCATATCCCGACCCAAGTGCTCGTCCTACTATGCGAGAAGTTGCGAAGATTCTGTCGGGAGAATGCGACGCCAATGAGTCCGAAACGATCGACTCGGATTCGTCTTTGTTTCGAAGGATGCAATCGAAGGAGACTTGGAGTGAATTTTCACAAGCTTTTGGCTATACAACATCATACCCAACACTAGAAGATTTAGAACCAGACAAAGTCTCTCTCTAG 1398 44.85 MAPAGTRRPRRPLLTQTLNLSQVFLDEMYVGFTASTGQLVESHKVLAWSFSNSNSSLSESLMTTGLPSFVLPNDPTDKSKWFIVGFTVGGFLLICSCVIISYLTIARCLRNAKERREREDWELEYWPHRISYREIEKSTKGFKEENVIGVGGNGKVYKGVLAGGAEIAVKRISTENDGMREFLAEISSIGRLKHRNLVGLKGWCKREKGTFMLIYDYMENGSLDKKIFEPETSKMLKFDERIRILKEVASAVLYLHEGWDAQVLHRDIKASNVLLDKDMNGRLGDFGLARVHGHSQVTSTTKVVGTVGYLAPEVIKSGRASTQTDVFGFGVLILEVMCGRRPIEEGKPPLVQWVWEMIEKDQLSNALDEKMRNFDSNFNKEETEKALHLGLLCAYPDPSARPTMREVAKILSGECDANESETIDSDSSLFRRMQSKETWSEFSQAFGYTTSYPTLEDLEPDKVSL 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11733810 11735207 + Bda026138.1 Bda07g00992 9882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g00992 465 CDD STKc_IRAK 148 411 - -
Bda07g00992 465 Gene3D Phosphorylase Kinase; domain 1 105 217 - -
Bda07g00992 465 PANTHER - 1 457 - -
Bda07g00992 465 SUPERFAMILY Protein kinase-like (PK-like) 120 411 IPR011009 -
Bda07g00992 465 Gene3D Transferase(Phosphotransferase) domain 1 218 437 - -
Bda07g00992 465 Gene3D - 2 80 - -
Bda07g00992 465 Pfam Protein kinase domain 142 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g00992 465 SMART serkin_6 142 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g00992 465 ProSiteProfiles Protein kinase domain profile. 142 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g00992 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Bda07g00992 465 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 1 457 - -
Bda07g00992 465 Pfam Legume lectin domain 2 56 IPR001220 GO:0030246
Bda07g00992 465 SUPERFAMILY Concanavalin A-like lectins/glucanases 7 161 IPR013320 -
Bda07g00992 465 ProSitePatterns Protein kinases ATP-binding region signature. 148 170 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00992 Bda-Chr7:11733810 Bda15g00542 Bda-Chr15:8488442 1.89E-108 dispersed
Bda01g01721 Bda-Chr1:53279924 Bda07g00992 Bda-Chr7:11733810 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69720 PF00069 Pkinase 2.70E-48 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g00992 - - pop:7477402 624.394