Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01026 ATGGCTACAACGGACGCTTCCCCGAAATTTCCGAGTGTTCCGAAGTCACCCGATTTCCTGCCCCAAATATCGGTTTCTCCTCCGATGCACGACGGCCTTTTCTTCTCACAGTTTATGATTTGCGGGTCTATAGCCGGATCGGTGGAGCATATGGCGATGTTTCCGGTCGATACACTCAAGACTCGGATGCAGGTTCTAGGTGGATCTTGCTCCACCCAACCCGTCGGACTCCGGCTAGCCCTTGGCTCTATCTTGAAGCTGGAGGGTCCTTCCGGTCTCTATCGCGGGATTGGCGCAATGGGTCTCGGCGCCGGACCGGCCCACGCAGTTTATTTCTCTGTTTACGAAGTTTGCAAAGAAGTTCTTTCCGGTGGAAATCCGAACAACTCGACTGCCCATGCTGTTTCCGGCGTTTTTGCGACTGTCGCGAGTGACGCAGTGATTACCCCGATGGATATGGTGAAGCAGAGGCTGCAGTTGAAAAACAGCCCTTACAGCGGAGTTGGAGACTGCGTGAGAAGAGTACTAATGGAAGAAGGGGTCGGAGCTTTTTACGCTTCGTATCGAACGACTGTTTTGATGAACGCGCCGTTCACAGCCGTCCATTTTGCTGCATACGAAGCTGCAAAGAGAGCTCTAATGGAGGTTTCTCCAGAGAGCACTAACGACGAGAGGCTGGTGGTTCATGCGACGGCGGGCGCAGTCGCAGGGGCCTTAGCTGCTGCTTTGACTACGCCTCTTGACGTTGTTAAAACTCAGTTGCAGTGCCAGGGAGTGTGCGGGTGTGACAGACTTTCAAGCAGTTCCATTGGAGATGTGGTAAGAAGGGTGATGGGGAAGGAGGGATATCACGGGCTGTTGAGAGGGTGGATTCCTAGGATGCTTTTTCATGCACCAGCTGCTGCAATTTGCTGGTCTACTTATGAAGCTTCGAAAACCTTCTTTCAAAAACTCAATCACAACACTTAG 969 52.32 MATTDASPKFPSVPKSPDFLPQISVSPPMHDGLFFSQFMICGSIAGSVEHMAMFPVDTLKTRMQVLGGSCSTQPVGLRLALGSILKLEGPSGLYRGIGAMGLGAGPAHAVYFSVYEVCKEVLSGGNPNNSTAHAVSGVFATVASDAVITPMDMVKQRLQLKNSPYSGVGDCVRRVLMEEGVGAFYASYRTTVLMNAPFTAVHFAAYEAAKRALMEVSPESTNDERLVVHATAGAVAGALAAALTTPLDVVKTQLQCQGVCGCDRLSSSSIGDVVRRVMGKEGYHGLLRGWIPRMLFHAPAAAICWSTYEASKTFFQKLNHNT 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12122694 12123757 + Bda026174.1 Bda07g01026 9916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01026 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 128 212 IPR018108 -
Bda07g01026 322 Gene3D Mitochondrial carrier domain 188 322 IPR023395 -
Bda07g01026 322 PRINTS Mitochondrial carrier protein signature 51 65 IPR002067 GO:0055085
Bda07g01026 322 PRINTS Mitochondrial carrier protein signature 185 203 IPR002067 GO:0055085
Bda07g01026 322 PRINTS Mitochondrial carrier protein signature 143 161 IPR002067 GO:0055085
Bda07g01026 322 PRINTS Mitochondrial carrier protein signature 38 51 IPR002067 GO:0055085
Bda07g01026 322 PRINTS Mitochondrial carrier protein signature 233 255 IPR002067 GO:0055085
Bda07g01026 322 Pfam Mitochondrial carrier protein 129 215 IPR018108 -
Bda07g01026 322 Pfam Mitochondrial carrier protein 225 317 IPR018108 -
Bda07g01026 322 Pfam Mitochondrial carrier protein 37 123 IPR018108 -
Bda07g01026 322 Gene3D Mitochondrial carrier domain 19 187 IPR023395 -
Bda07g01026 322 PANTHER MITOFERRIN-LIKE 2 321 - -
Bda07g01026 322 PANTHER MITOFERRIN-1-RELATED 2 321 - -
Bda07g01026 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 33 121 IPR018108 -
Bda07g01026 322 SUPERFAMILY Mitochondrial carrier 35 309 IPR023395 -
Bda07g01026 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 314 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01026 Bda-Chr7:12122694 Bda09g01563 Bda-Chr9:47179361 1.24E-06 dispersed
Bda07g01026 Bda-Chr7:12122694 Bda07g01034 Bda-Chr7:12192340 3.47E-31 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01026 K15113 - jre:108982304 521.161