Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01034 ATGAATGCGTCTAGCTCTCGATCTCAATCGTTGGGTCAGGCTGAAATTAACTGGGATAAGCTTGATAAGACTAAATTTGATGTCGTAGGAGCTGGTCTTTTTACAGGGGTTACAGTTGCTCTGTATCCCATCTCTGTAGTGAAAACAAGGCTGCAAGTTGCTTCGAAGGAAACTGTGGAAAGAAAAGCATTTTCTGTTATAAAGGGGATACTGAAAATGGATGGAGTTCCCGGTCTCTATAGAGGGTTTGGAGCCGTGATCATTGGTGCAATTCCAACAAGAATCCTTTTCTTAACTGCTTTAGAGACAACAAAAGTAGGCGCCTTTAAATTTGTGGAGCCACTTAAATTATCTGAACCAACACAGGCAGCTATAGCAAATGGATTAGCAGGCATGTCAGCATCTCTTTGTTCTCAAGCTGTTTTCGTTCCCGTTGATGTGATTAGTCAGAAGTTGATGGTGCAAGGATACTCTGGGAATATTAAATATAGTGGGGGTTTGGATGTTGCCTGCAAGCTTATAAAATCTAATGGAATATGCGGATTATATAAGGGGTTTGGTTTATCTGTCCTTACTTACTCGCCATCAAGTGCTGTATGGTGGGCAAGTTATGGCTCAAGTCAACGTATCATCTGGAGGCTTCTGGGACGAGGTACTAAAGCCGAAGAATCTGCTCCTAGTGAGGCAAATATAATGTTTGTTCAAGCTTCCGGGGCAATAACAGCAGGTGCAACCGCTTCCTGCATTACCACACCAATGGACACCATTAAAACTCGCTTGCAGGTTATGGGGCATGAAAGCAGAAACACCGCCAGGCAAGTTGTGAGAGGTCTAATTAGGGAAGAAGGGTGGGCAGGATCATACAGGGGGTTGGGTCCTAGATTTGTCAGCATGTCTGCATGGGGAACCTCAATGATATTGGCATATGAATACTTGAGTATGATTTCTCCCCTCTTTCAGACCCTATTAACTCTTTGCTGCAGTATTAATTTTATACTTTTGACATCAAAAAGATTGATTTGTTGTTTTTGTTCAACGTAG 1041 42.56 MNASSSRSQSLGQAEINWDKLDKTKFDVVGAGLFTGVTVALYPISVVKTRLQVASKETVERKAFSVIKGILKMDGVPGLYRGFGAVIIGAIPTRILFLTALETTKVGAFKFVEPLKLSEPTQAAIANGLAGMSASLCSQAVFVPVDVISQKLMVQGYSGNIKYSGGLDVACKLIKSNGICGLYKGFGLSVLTYSPSSAVWWASYGSSQRIIWRLLGRGTKAEESAPSEANIMFVQASGAITAGATASCITTPMDTIKTRLQVMGHESRNTARQVVRGLIREEGWAGSYRGLGPRFVSMSAWGTSMILAYEYLSMISPLFQTLLTLCCSINFILLTSKRLICCFCST 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12192340 12195266 + Bda026180.1 Bda07g01034 9924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01034 346 SUPERFAMILY Mitochondrial carrier 19 312 IPR023395 -
Bda07g01034 346 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 315 - -
Bda07g01034 346 Gene3D Mitochondrial carrier domain 28 317 IPR023395 -
Bda07g01034 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 210 IPR018108 -
Bda07g01034 346 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 315 - -
Bda07g01034 346 PRINTS Mitochondrial carrier protein signature 80 98 IPR002067 GO:0055085
Bda07g01034 346 PRINTS Mitochondrial carrier protein signature 36 54 IPR002067 GO:0055085
Bda07g01034 346 PRINTS Mitochondrial carrier protein signature 131 153 IPR002067 GO:0055085
Bda07g01034 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 22 107 IPR018108 -
Bda07g01034 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 230 315 IPR018108 -
Bda07g01034 346 Pfam Mitochondrial carrier protein 32 106 IPR018108 -
Bda07g01034 346 Pfam Mitochondrial carrier protein 124 211 IPR018108 -
Bda07g01034 346 Pfam Mitochondrial carrier protein 237 312 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01034 Bda-Chr7:12192340 Bda10g00867 Bda-Chr10:43170391 2.05E-76 dispersed
Bda07g01026 Bda-Chr7:12122694 Bda07g01034 Bda-Chr7:12192340 3.47E-31 proximal
Bda12g00204 Bda-Chr12:2014370 Bda07g01034 Bda-Chr7:12192340 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01034 K15121 - cpap:110820144 490.345