Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01037 ATGGGTTCCGTTTGCTGCTGTTTAAACTTTGGAAATTTCGAAGATAATGTTAATCAAGACAATCCAGCATATGGGAACTGTATATGTCTTAGCTGCTTTGTTAATAACTTCTCAAATGTGTATACATCACTTTTCAGAAGAGGGGAAGTGCATTCCTTTTCTACATCTATTCAGGGGGTGACATCTTTGACTTCCACTGCATCTTTTGACAACTCCTTGCCTGATATGTATCATTCTCCTCCATTTCCACTGCCTTATGATGCTGAACCAAGATATATCCGCCTGCGACGTGATGGGCTAGTTTCGAGCCGTGAAAAGGGCTCGAGCCATTTGCATGGAGAATTGGAGCCTCTGAGAAGTGATATTGATATGGATATGGCTTTGAGGGCTGCTGACAAGTTGAATAGATCTACTGGTGAAGATGAATCTAGAGACGAGTTGAGGAAGTCCTCGTTAAAATATTATTCTGCGAAAAAATCCACTGCAGTTGAGAAAAATTACGCATTTTCGGAAGACGAGGATGTCTGTCCTACGTGTCTTGAAGAATATACTCTTGAAAATCCCAAGATTATGACCAAATGTTCTCATGATTTTCATCTTGGATGCATATATGAGTGGATGGAGAGAAGTGAAAGCTGCCCAGTTTGTGGGAAGCTGATGGCATTCAATGAAACCACATGA 681 40.97 MGSVCCCLNFGNFEDNVNQDNPAYGNCICLSCFVNNFSNVYTSLFRRGEVHSFSTSIQGVTSLTSTASFDNSLPDMYHSPPFPLPYDAEPRYIRLRRDGLVSSREKGSSHLHGELEPLRSDIDMDMALRAADKLNRSTGEDESRDELRKSSLKYYSAKKSTAVEKNYAFSEDEDVCPTCLEEYTLENPKIMTKCSHDFHLGCIYEWMERSESCPVCGKLMAFNETT 226
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 12219786 12221974 - Bda026183.1 Bda07g01037 9927
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01037 226 ProSiteProfiles Zinc finger RING-type profile. 176 216 IPR001841 -
Bda07g01037 226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 133 221 IPR013083 -
Bda07g01037 226 SMART ring_2 176 216 IPR001841 -
Bda07g01037 226 SUPERFAMILY RING/U-box 168 221 - -
Bda07g01037 226 Pfam RING-H2 zinc finger domain 173 216 IPR024766 GO:0008270
Bda07g01037 226 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 225 - -
Bda07g01037 226 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 225 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01195 Bda-Chr1:47220769 Bda07g01037 Bda-Chr7:12219786 2.66E-105 dispersed
Bda07g01037 Bda-Chr7:12219786 Bda13g00508 Bda-Chr13:6048273 1.03E-50 dispersed
Bda12g00210 Bda-Chr12:2055104 Bda07g01037 Bda-Chr7:12219786 8.78E-116 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01037 - - zju:107416681 322.398