Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda07g01037 | ATGGGTTCCGTTTGCTGCTGTTTAAACTTTGGAAATTTCGAAGATAATGTTAATCAAGACAATCCAGCATATGGGAACTGTATATGTCTTAGCTGCTTTGTTAATAACTTCTCAAATGTGTATACATCACTTTTCAGAAGAGGGGAAGTGCATTCCTTTTCTACATCTATTCAGGGGGTGACATCTTTGACTTCCACTGCATCTTTTGACAACTCCTTGCCTGATATGTATCATTCTCCTCCATTTCCACTGCCTTATGATGCTGAACCAAGATATATCCGCCTGCGACGTGATGGGCTAGTTTCGAGCCGTGAAAAGGGCTCGAGCCATTTGCATGGAGAATTGGAGCCTCTGAGAAGTGATATTGATATGGATATGGCTTTGAGGGCTGCTGACAAGTTGAATAGATCTACTGGTGAAGATGAATCTAGAGACGAGTTGAGGAAGTCCTCGTTAAAATATTATTCTGCGAAAAAATCCACTGCAGTTGAGAAAAATTACGCATTTTCGGAAGACGAGGATGTCTGTCCTACGTGTCTTGAAGAATATACTCTTGAAAATCCCAAGATTATGACCAAATGTTCTCATGATTTTCATCTTGGATGCATATATGAGTGGATGGAGAGAAGTGAAAGCTGCCCAGTTTGTGGGAAGCTGATGGCATTCAATGAAACCACATGA | 681 | 40.97 | MGSVCCCLNFGNFEDNVNQDNPAYGNCICLSCFVNNFSNVYTSLFRRGEVHSFSTSIQGVTSLTSTASFDNSLPDMYHSPPFPLPYDAEPRYIRLRRDGLVSSREKGSSHLHGELEPLRSDIDMDMALRAADKLNRSTGEDESRDELRKSSLKYYSAKKSTAVEKNYAFSEDEDVCPTCLEEYTLENPKIMTKCSHDFHLGCIYEWMERSESCPVCGKLMAFNETT | 226 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 12219786 | 12221974 | - | Bda026183.1 | Bda07g01037 | 9927 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda07g01037 | 226 | ProSiteProfiles | Zinc finger RING-type profile. | 176 | 216 | IPR001841 | - | |
| Bda07g01037 | 226 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 133 | 221 | IPR013083 | - | |
| Bda07g01037 | 226 | SMART | ring_2 | 176 | 216 | IPR001841 | - | |
| Bda07g01037 | 226 | SUPERFAMILY | RING/U-box | 168 | 221 | - | - | |
| Bda07g01037 | 226 | Pfam | RING-H2 zinc finger domain | 173 | 216 | IPR024766 | GO:0008270 | |
| Bda07g01037 | 226 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 1 | 225 | - | - | |
| Bda07g01037 | 226 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE | 1 | 225 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda01g01195 | Bda-Chr1:47220769 | Bda07g01037 | Bda-Chr7:12219786 | 2.66E-105 | dispersed | |
| Bda07g01037 | Bda-Chr7:12219786 | Bda13g00508 | Bda-Chr13:6048273 | 1.03E-50 | dispersed | |
| Bda12g00210 | Bda-Chr12:2055104 | Bda07g01037 | Bda-Chr7:12219786 | 8.78E-116 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda07g01037 | - | - | zju:107416681 | 322.398 |