Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01052 ATGAACTTGGCAAACATGACTCAGCTAGCTTTTCTTGATTTATCCTACAATAATCTCACTGGCCCTGTCCCCAGATTTCCAAGCAAAACATTCAACATTGTTGGAAATCCTCTGATCTGTGCTACAGGGTCTGAAGCTGAATGCAGCACAACTCTAATGCCAATGTCCATGAATTTGAACAGCTCTCAATCTGATTCATCGCCGAACAGACCGAAAAAACACAAAATGGCCCTTGCAATCGCCTCCACTCTCACCTGCCTCTGTTTGATTTCTCTTGGATTTGGACTGTTTCTATGGTGGAAACATAAATACAACAAACAAATTTTCTTTGATGTAAAGGACCGAAATCACGAGGAGACCCATCTTGGAAACCTGAGGAGGTTTCAATTCAGGGAGCTTCAAATAGCTACTCGAAATTTCAGCAGCAAAAACATACTCGGAAAAGGAGGATTTGGAAATGTGTACAAAGGAATTCTCAGTGATGGAGGTATAGTTGCTGTGAAGAGGCTCAAAGATGGTAACGCCATTGGAGGTGAAGTACAGTTTCAGACTGAAGTTGAGATGATCAGCCTAGCTGTTCATAGAAATCTCTTAAGACTATACGGATTTTGTATAACGCCCACCGAAAGACTCCTCGTCTATCCGTACATGCCAAACGGAAGCGTAGCCTCTCGTCTTAAAGGAAAGCCGATATTGGAATGGGCGACGAGAAAGAGGATCGCGATAGGGGCAGCAAGGGGATTATTGTATTTACACGAGCAATGTGATCCGAAAATAATACACAGGGACGTAAAAGCCGCTAATATTTTGCTAGACGAGTATTGTGAAGCTGTAGTCGGAGATTTTGGATTGGCAAAGCTTTTGGATCATCAAGATTCGCATGTCACAACGGCCGTGAGAGGAACTGTGGGCCACATGGCCCCGGAATATCTTTCAACGGGCCAGTCGTCTGAAAAGACGGATGTTTTTGGCTTTGGAATTCTCCTGCTTGAGCTCATTACAGGTCAAAGAGCACTTGAATTTGGGAAATCAGCTAATCAGAAAGGAGCAGTTCTTGATTGGGTGAGAAAAATACAGCAAGAAAAGAAACTCGAGGTGCTCGTGGACAAGGATTTAAAGTGCAATTACGATCGGATCGAGCTCGAGGAGACGGTTCAAGTGGCTCTCCTCTGCACCCAATATCTTCCAGTTCACAGGCCTAAAATGTCTGAAGTTGTGAGAATGCTTGAAGGGGATGGTCTTGCTGTGAGGTGGGAGGCTTCTCAGAAAGTCGACTCGACAAAGGGCAAGCCTCACGAATTCTCCTCCTCCGATCGATTTTCCGATCTCACTGACGACTCTTCCCTACTAGTTCAAGCAATGGAGCTCTCAGGTCCCAGGTAA 1383 44.9 MNLANMTQLAFLDLSYNNLTGPVPRFPSKTFNIVGNPLICATGSEAECSTTLMPMSMNLNSSQSDSSPNRPKKHKMALAIASTLTCLCLISLGFGLFLWWKHKYNKQIFFDVKDRNHEETHLGNLRRFQFRELQIATRNFSSKNILGKGGFGNVYKGILSDGGIVAVKRLKDGNAIGGEVQFQTEVEMISLAVHRNLLRLYGFCITPTERLLVYPYMPNGSVASRLKGKPILEWATRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANILLDEYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHMAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKSANQKGAVLDWVRKIQQEKKLEVLVDKDLKCNYDRIELEETVQVALLCTQYLPVHRPKMSEVVRMLEGDGLAVRWEASQKVDSTKGKPHEFSSSDRFSDLTDDSSLLVQAMELSGPR 460
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12392324 12394466 - Bda026200.1 Bda07g01052 9942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01052 460 Pfam Protein kinase domain 141 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g01052 460 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 1 460 - -
Bda07g01052 460 SMART serkin_6 140 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g01052 460 SUPERFAMILY Protein kinase-like (PK-like) 117 410 IPR011009 -
Bda07g01052 460 Gene3D Ribonuclease Inhibitor 1 53 IPR032675 -
Bda07g01052 460 ProSitePatterns Protein kinases ATP-binding region signature. 146 168 IPR017441 GO:0005524
Bda07g01052 460 Gene3D Phosphorylase Kinase; domain 1 109 216 - -
Bda07g01052 460 ProSiteProfiles Protein kinase domain profile. 140 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g01052 460 Gene3D Transferase(Phosphotransferase) domain 1 217 429 - -
Bda07g01052 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Bda07g01052 460 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 1 460 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00411 Bda-Chr3:3543626 Bda07g01052 Bda-Chr7:12392324 4.41E-169 dispersed
Bda07g01052 Bda-Chr7:12392324 Bda09g00911 Bda-Chr9:25761206 0 dispersed
Bda07g01052 Bda-Chr7:12392324 Bda01g02214 Bda-Chr1:57998963 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69723 PF00069 Pkinase 8.40E-45 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01052 - - jre:109001347 782.326