Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda07g01052 | ATGAACTTGGCAAACATGACTCAGCTAGCTTTTCTTGATTTATCCTACAATAATCTCACTGGCCCTGTCCCCAGATTTCCAAGCAAAACATTCAACATTGTTGGAAATCCTCTGATCTGTGCTACAGGGTCTGAAGCTGAATGCAGCACAACTCTAATGCCAATGTCCATGAATTTGAACAGCTCTCAATCTGATTCATCGCCGAACAGACCGAAAAAACACAAAATGGCCCTTGCAATCGCCTCCACTCTCACCTGCCTCTGTTTGATTTCTCTTGGATTTGGACTGTTTCTATGGTGGAAACATAAATACAACAAACAAATTTTCTTTGATGTAAAGGACCGAAATCACGAGGAGACCCATCTTGGAAACCTGAGGAGGTTTCAATTCAGGGAGCTTCAAATAGCTACTCGAAATTTCAGCAGCAAAAACATACTCGGAAAAGGAGGATTTGGAAATGTGTACAAAGGAATTCTCAGTGATGGAGGTATAGTTGCTGTGAAGAGGCTCAAAGATGGTAACGCCATTGGAGGTGAAGTACAGTTTCAGACTGAAGTTGAGATGATCAGCCTAGCTGTTCATAGAAATCTCTTAAGACTATACGGATTTTGTATAACGCCCACCGAAAGACTCCTCGTCTATCCGTACATGCCAAACGGAAGCGTAGCCTCTCGTCTTAAAGGAAAGCCGATATTGGAATGGGCGACGAGAAAGAGGATCGCGATAGGGGCAGCAAGGGGATTATTGTATTTACACGAGCAATGTGATCCGAAAATAATACACAGGGACGTAAAAGCCGCTAATATTTTGCTAGACGAGTATTGTGAAGCTGTAGTCGGAGATTTTGGATTGGCAAAGCTTTTGGATCATCAAGATTCGCATGTCACAACGGCCGTGAGAGGAACTGTGGGCCACATGGCCCCGGAATATCTTTCAACGGGCCAGTCGTCTGAAAAGACGGATGTTTTTGGCTTTGGAATTCTCCTGCTTGAGCTCATTACAGGTCAAAGAGCACTTGAATTTGGGAAATCAGCTAATCAGAAAGGAGCAGTTCTTGATTGGGTGAGAAAAATACAGCAAGAAAAGAAACTCGAGGTGCTCGTGGACAAGGATTTAAAGTGCAATTACGATCGGATCGAGCTCGAGGAGACGGTTCAAGTGGCTCTCCTCTGCACCCAATATCTTCCAGTTCACAGGCCTAAAATGTCTGAAGTTGTGAGAATGCTTGAAGGGGATGGTCTTGCTGTGAGGTGGGAGGCTTCTCAGAAAGTCGACTCGACAAAGGGCAAGCCTCACGAATTCTCCTCCTCCGATCGATTTTCCGATCTCACTGACGACTCTTCCCTACTAGTTCAAGCAATGGAGCTCTCAGGTCCCAGGTAA | 1383 | 44.9 | MNLANMTQLAFLDLSYNNLTGPVPRFPSKTFNIVGNPLICATGSEAECSTTLMPMSMNLNSSQSDSSPNRPKKHKMALAIASTLTCLCLISLGFGLFLWWKHKYNKQIFFDVKDRNHEETHLGNLRRFQFRELQIATRNFSSKNILGKGGFGNVYKGILSDGGIVAVKRLKDGNAIGGEVQFQTEVEMISLAVHRNLLRLYGFCITPTERLLVYPYMPNGSVASRLKGKPILEWATRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANILLDEYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHMAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKSANQKGAVLDWVRKIQQEKKLEVLVDKDLKCNYDRIELEETVQVALLCTQYLPVHRPKMSEVVRMLEGDGLAVRWEASQKVDSTKGKPHEFSSSDRFSDLTDDSSLLVQAMELSGPR | 460 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 12392324 | 12394466 | - | Bda026200.1 | Bda07g01052 | 9942 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda07g01052 | 460 | Pfam | Protein kinase domain | 141 | 406 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda07g01052 | 460 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 1 | 460 | - | - | |
Bda07g01052 | 460 | SMART | serkin_6 | 140 | 395 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda07g01052 | 460 | SUPERFAMILY | Protein kinase-like (PK-like) | 117 | 410 | IPR011009 | - | |
Bda07g01052 | 460 | Gene3D | Ribonuclease Inhibitor | 1 | 53 | IPR032675 | - | |
Bda07g01052 | 460 | ProSitePatterns | Protein kinases ATP-binding region signature. | 146 | 168 | IPR017441 | GO:0005524 | |
Bda07g01052 | 460 | Gene3D | Phosphorylase Kinase; domain 1 | 109 | 216 | - | - | |
Bda07g01052 | 460 | ProSiteProfiles | Protein kinase domain profile. | 140 | 435 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda07g01052 | 460 | Gene3D | Transferase(Phosphotransferase) domain 1 | 217 | 429 | - | - | |
Bda07g01052 | 460 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 259 | 271 | IPR008271 | GO:0004672|GO:0006468 | |
Bda07g01052 | 460 | PANTHER | PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 | 1 | 460 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00411 | Bda-Chr3:3543626 | Bda07g01052 | Bda-Chr7:12392324 | 4.41E-169 | dispersed | |
Bda07g01052 | Bda-Chr7:12392324 | Bda09g00911 | Bda-Chr9:25761206 | 0 | dispersed | |
Bda07g01052 | Bda-Chr7:12392324 | Bda01g02214 | Bda-Chr1:57998963 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69723 | PF00069 | Pkinase | 8.40E-45 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda07g01052 | - | - | jre:109001347 | 782.326 |