Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda07g01078 | ATGTCACCGGTTGATTCTTCACGCGAGGAGTATGTTTACTATGCAAAGTTGGCCGAACAGGCTGAACGGTATGAAGAAATGGTTGAGTTCATGGAGAAAGTTGTAAAGATAGTGGATACTGAGGAGCTTACTGGGGAGGAAAGGAATCTTCTCTCAGTGGCTTACAAGAATGTGATTGGGGCTAGGAGGGCCTCATGGAGGATTATATCCTCCATTGAACAGAAGGAGGAGAGTAGGGGAAATGAGGATCATGTTGCACTAATCAAGGAGTACCGAGGCAAGATCGAAAGTGAACTGAGCAAGATATGTGATGGGATATTGAAACTTCTCGATTCTCATCTTATCCCCTCAGCCTCAACTGCTGAATGTAAGGTGTTTTATCTAAAAATGAAGGGAGATTACCACAGGTACCTTGCTGAGTTTAAGTCTGGAGCCGAGAGGAAAGAAGCTGCTGAGAGCACTTTGTTGGCTTACAAGTCTGCTCAGGACATTGCTCTTGCTGAACTAGCTCCTACACACCCGATAAGGCTTGGACTTGCACTTAACTTCTCAGTATTCTACTATGAAATTCTTAACTCTCCAGATCGTGCATGCAATCTTGCGAAGCAGTTATTTACATGGGGTTGGAATCAAAGAGGAACACTAGGACACCCACCAGAGACAAAAACTGAAAACATTCCAAGCCAGGTTAAAGCTCTTTCAAGCGTTAAAATCGTCCAGGCAGCTATAGGAGGGTGGCATTGTTTGGCTGTGGATGATCAAGGCCGAGCATATGCATGGGGTGGAAATGAGTATGGCCAATGTGGTGAAGAACCTGGAAGGAAAGATGACACTGGTAGGCTAATCAGGAGAGATATCGTGATTCCTCAACGATGTGCGCCAATGCTTGTTGTTCGCCAGGTAGCCGCAGGAGGTACACACTCTGTAGTACTTACACGAGAAGGGCGTGTATGGACATGGGGTCAACCGTGGCCCCCTGGTTACATAAAACAAATCTCCGTCCCTGTTCGCGTGCAAGGTCTTGACAATGTGAAGCTCATTGCAGTTGGGGCATTTCATAATTTGGCTCTTCAAGAGGATGGAACTTTATGGGCGTGGGGTAACAATGAATATGGACAACTTGGGACGGGAGATACCCAACCAAGGTCGCAGCCTATTCGTGTTCAAGGGCTTTCTGGTCTTACTTTGGTTGATATTGCTGCTGGAGGGTGGCATTCTACTGCATTGACAGATAATGGCGAGGTTTACGGCTGGGGAAGAGGAGAGCATGGGAGACTTGGATTTGGAGATAATGATAAGAGCAGTAAAATGGTTCCTCAAAGGGTTCAACTTCTGGCCGGGGAAGACATTGTCCAGGTGTCTTGTGGGGGTACACATTCTGTCGCACTAACTCGTGATGGTCACATGTTCTCGTTCGGGCGAGGTGACCATGGGCGACTCGGGAATGGGAGGAATGTGACAACGGGTCAGCCAATGGAAGTGCCCATCAAGAATATCCCAGCAAGAAGTGGAGGGGATGGAAATTGGACTGCTAAACTAGTTGCTTGTGGTGGGCGCCATACTTTAGCTATCCTTGAGGGCAAGTGA | 1587 | 47.45 | MSPVDSSREEYVYYAKLAEQAERYEEMVEFMEKVVKIVDTEELTGEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVALIKEYRGKIESELSKICDGILKLLDSHLIPSASTAECKVFYLKMKGDYHRYLAEFKSGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQLFTWGWNQRGTLGHPPETKTENIPSQVKALSSVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPGRKDDTGRLIRRDIVIPQRCAPMLVVRQVAAGGTHSVVLTREGRVWTWGQPWPPGYIKQISVPVRVQGLDNVKLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIRVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQRVQLLAGEDIVQVSCGGTHSVALTRDGHMFSFGRGDHGRLGNGRNVTTGQPMEVPIKNIPARSGGDGNWTAKLVACGGRHTLAILEGK | 528 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 12622014 | 12629770 | - | Bda026231.2 | Bda07g01078 | 9968 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda07g01078 | 528 | Gene3D | - | 325 | 528 | IPR009091 | - | |
Bda07g01078 | 528 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 466 | 524 | IPR000408 | - | |
Bda07g01078 | 528 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 255 | 311 | IPR000408 | - | |
Bda07g01078 | 528 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 412 | 463 | IPR000408 | - | |
Bda07g01078 | 528 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 203 | 251 | IPR000408 | - | |
Bda07g01078 | 528 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 360 | 409 | IPR000408 | - | |
Bda07g01078 | 528 | SUPERFAMILY | 14-3-3 protein | 7 | 215 | IPR036815 | - | |
Bda07g01078 | 528 | ProSitePatterns | 14-3-3 proteins signature 1. | 48 | 58 | IPR023409 | - | |
Bda07g01078 | 528 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 202 | 254 | IPR000408 | - | |
Bda07g01078 | 528 | Gene3D | - | 2 | 226 | IPR036815 | - | |
Bda07g01078 | 528 | SMART | 1433_4 | 8 | 240 | IPR023410 | - | |
Bda07g01078 | 528 | PANTHER | REGULATOR OF CHROMOSOME CONDENSATION | 202 | 528 | - | - | |
Bda07g01078 | 528 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 361 | 412 | IPR000408 | - | |
Bda07g01078 | 528 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 255 | 314 | IPR000408 | - | |
Bda07g01078 | 528 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 467 | 527 | IPR000408 | - | |
Bda07g01078 | 528 | SUPERFAMILY | RCC1/BLIP-II | 204 | 495 | IPR009091 | - | |
Bda07g01078 | 528 | PANTHER | BNAC01G28130D PROTEIN | 202 | 528 | - | - | |
Bda07g01078 | 528 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 413 | 466 | IPR000408 | - | |
Bda07g01078 | 528 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 514 | 524 | IPR000408 | - | |
Bda07g01078 | 528 | Coils | Coil | 14 | 34 | - | - | |
Bda07g01078 | 528 | Pfam | 14-3-3 protein | 15 | 206 | IPR023410 | - | |
Bda07g01078 | 528 | PRINTS | 14-3-3 protein zeta signature | 91 | 115 | IPR000308 | - | |
Bda07g01078 | 528 | PRINTS | 14-3-3 protein zeta signature | 157 | 183 | IPR000308 | - | |
Bda07g01078 | 528 | PRINTS | 14-3-3 protein zeta signature | 184 | 210 | IPR000308 | - | |
Bda07g01078 | 528 | PRINTS | 14-3-3 protein zeta signature | 42 | 71 | IPR000308 | - | |
Bda07g01078 | 528 | PRINTS | 14-3-3 protein zeta signature | 122 | 144 | IPR000308 | - | |
Bda07g01078 | 528 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 315 | 360 | IPR000408 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g01078 | Bda-Chr7:12622014 | Bda13g01756 | Bda-Chr13:40903858 | 1.78E-128 | dispersed | |
Bda07g01078 | Bda-Chr7:12622014 | Bda01g01183 | Bda-Chr1:47114550 | 1.75E-133 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda07g01078 | - | - | cit:102618063 | 619.002 |