Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01123 TTATTTGAAATTAATCTTAATGTTGCAGATCAGGAGAAAGCACAAAATATCATGTCATCTTCCTCAAACCCGCCGTGCGCCGCCTGTAAGTTTCTCCGCCGGAAATGCCAACCGGAGTGTGTATTTGCTCCCTACTTTCCCCCCGACCAACCTTCAAAATTTACCGACGTCCACAAAATATTCGGAGCAGGCAACGTGGCCAAGCTAGTAAACGAGCTTCACCACCACCAGAGAGAAGACGCCGTCAATTCCCTTGCTTACGAGGCCGATATGCGCCTCCGTGACCCCGTCTACGGTTGCGTCGGTGTCATCTCCCTCCTCCAGCGCCAACTTCGGCAGCTCCAGGTTGACCTAAGTTTGGCAAAGTCTGAGCTCTCCAAGTACCAAAACCTAGGTCTCAATGGGCACGGCCACCATCGCCAGTCTCAAACTAGCCTCGGCATGGGCTTGATCGATGGCATGAAGGATCAGCATGATAATTATCAGCAACAAATGAAGACGTGTTTGGACACCGGAAACAGCCCCAAGACAGCCGGAGTTATCACCGTAAATGTCTCAGCAAGAATAGAGCAGTTGGTTCAGCCCCGGCAACCAAAAGCGGTGGCCAGAGAGGAGAGCAGGCGAAGAAATTGA 633 51.5 LFEINLNVADQEKAQNIMSSSSNPPCAACKFLRRKCQPECVFAPYFPPDQPSKFTDVHKIFGAGNVAKLVNELHHHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQRQLRQLQVDLSLAKSELSKYQNLGLNGHGHHRQSQTSLGMGLIDGMKDQHDNYQQQMKTCLDTGNSPKTAGVITVNVSARIEQLVQPRQPKAVAREESRRRN 210
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13134567 13135199 + Bda026277.1 Bda07g01123 10013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01123 210 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 17 153 - -
Bda07g01123 210 Pfam Lateral organ boundaries (LOB) domain 25 122 IPR004883 -
Bda07g01123 210 PANTHER LOB DOMAIN-CONTAINING PROTEIN 6-LIKE 17 153 - -
Bda07g01123 210 ProSiteProfiles LOB domain profile. 24 125 IPR004883 -
Bda07g01123 210 Coils Coil 104 131 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01103 Bda-Chr1:45777636 Bda07g01123 Bda-Chr7:13134567 1.45E-79 dispersed
Bda07g01123 Bda-Chr7:13134567 Bda11g01424 Bda-Chr11:18932366 7.63E-54 dispersed
Bda13g01832 Bda-Chr13:42352205 Bda07g01123 Bda-Chr7:13134567 1.22E-73 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16149 PF03195 LOB 7.30E-41 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01123 - - pop:7460659 245.358