Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01133 ATGGCTTCTATGAACTGGCTTGGTTTCTCTCTCTCCCCCCAGGAGTTTTCTTCTCAAGCAGGTGAAGATCATTCTGCCCAAAGCTCGGTTTGCCGCCTCGGATTCGACTCCGATGAAATCTCCGGCCATGTCTCCGGCGACTGCTTCGATCACTCTTCTACTCCCTCTCTCATTCTCCCTCCTCCTTTTGGACTTCTTGAATCTTACAACCATCGCCCCAATCAATCTCAAGATTGGAACTTTAAGAGTACGGCGATGAACTCTGACAACAACTACAAAGAAAACTCGTCAGAACTTTCAATTTTAATGGCTACCACTTCATGCAGCAGCCGAAATATCGAAACCCATCATCAACCGAAGCTCGAAAACTTTCTCGGCCGCGAAAACCCAAACTCCTTCATATACGCAGCAAATGCGGCGATCGGAGATGGAGGTGACGATGGAGCTAATGGCAGCAGTGTTAATAGTAGCTCTATTGGGTTGTCAATGATAAAGACATGGCTAAGAAGCCAACCAACACATTCCACTGCAGAGAATAAGAACGATGATGGCGGATCAAAAACCAGAAATGCACAAAGTTTGTCACTTTCTATGAGCACTGGTTCTAGTTTGCCATTGCCATTGCCATTGCTCCAAACTAGCTCCGCCGGAAATGGCGGTGGGGAGAGTTCTGCGTCGGAGAATAAACAAATTAAAACTTCATCCGGTATGGATGCCAAAAATGGCGCCATCGAAGGTGTGCCAAGAAAGTCCATCGATACATTTGGACAAAGAACTTCTATTTATCGTGGCGTAACAAGGCATAGATGGACGGGTAGATACGAGGCTCATCTTTGGGACAACAGTTGCAGAAGAGAAGGACAAACTAGGAAAGGCAGACAAGGTAATTTGTCTTTCATAGGAGGTTATGATAAAGAAGATAAAGCAGCGAGAGCCTATGATTTAGCAGCACTTAAATATTGGGGTACCACTACTACTACAAATTTCCCTATTAGCAACTACGAAAAAGAATTAGAAGAAATGAAGCACGCGACGAGACAAGAATACGTTGCATCTCTTAGAAGGAAGAGTAGTGGGTTTTCTCGAGGAGCTTCGATTTATCGCGGAGTAACGAGACACCATCAACATGGAAGATGGCAAGCAAGGATTGGAAGAGTTGCAGGAAACAAAGACCTATATTTAGGAACTTTCAGCACTCAAGAGGAAGCTGCAGAGGCTTACGACATTGCAGCCATAAAGTTCAGGGGGCTAAATGCTGTGACAAACTTTGATATGAACAGATATGATGTAAAATCAATCTTAGAAAGCAGTACTCTCCCCATTGGAGGAGCCTCAAAGAGATTGAAAGATGTTGATCAAGCTGAGATCATGTCCGTCGACGGACTAAGAACCGACGAAGAATCCATTTCTCAACTCACCGACCACGGAATGGGCGGCTACGGCAGCTTGAACCACCATGCCTGGCTGGGTTTTTCCTTCCAACAAGCTCGGTTTCAGCCCTACAATGGCTTCCACCACCCTTATGGACAAAGGGGTTGGTGTAAGCAAGAGCAAGACTCCGAGGTGGTCTCCCATGGCTTCCATGATCTTAACCAGCTTCAAACTGGAAACACCCACAATTTCTTTCAGCATAATTCTTCTCTGCATAATCTGACAGCGATGGATTCTTCCTCGATGGAGCATAGTTCTGGTTCTAACTCCATTCTTTACAGCAATGGAGGCGGAGGAGACGTTGGAAATAACAACAGTAACGGCGGAGTTATCGGATATGGAAGCTGCAACAATGGCGGCGGATATGGGATTCCGGTCGGAACAACGATAATTTCAAATGATCATGAAAATGGCGGAGGGTACGAGAATCTTTTTGGAAATTCAGTGGATCCTTATCAGGGAAGGAACTTGTATTGTCTGTCGCAACAATCACCAGTATCAACGGCTGTGATTAAACCAAGCGCATATGATCAAGGGTCCGCATGCAACAACTGGGTCCCAACTGCAGTTCCAACCCTAGCTCCGAGGTCTACTAACATGGCTGTCTGTCATGGAACTCCAGCTTTCACGATTTGGAATGACTCCTGA 2079 45.79 MASMNWLGFSLSPQEFSSQAGEDHSAQSSVCRLGFDSDEISGHVSGDCFDHSSTPSLILPPPFGLLESYNHRPNQSQDWNFKSTAMNSDNNYKENSSELSILMATTSCSSRNIETHHQPKLENFLGRENPNSFIYAANAAIGDGGDDGANGSSVNSSSIGLSMIKTWLRSQPTHSTAENKNDDGGSKTRNAQSLSLSMSTGSSLPLPLPLLQTSSAGNGGGESSASENKQIKTSSGMDAKNGAIEGVPRKSIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQGNLSFIGGYDKEDKAARAYDLAALKYWGTTTTTNFPISNYEKELEEMKHATRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMNRYDVKSILESSTLPIGGASKRLKDVDQAEIMSVDGLRTDEESISQLTDHGMGGYGSLNHHAWLGFSFQQARFQPYNGFHHPYGQRGWCKQEQDSEVVSHGFHDLNQLQTGNTHNFFQHNSSLHNLTAMDSSSMEHSSGSNSILYSNGGGGDVGNNNSNGGVIGYGSCNNGGGYGIPVGTTIISNDHENGGGYENLFGNSVDPYQGRNLYCLSQQSPVSTAVIKPSAYDQGSACNNWVPTAVPTLAPRSTNMAVCHGTPAFTIWNDS 692
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13478377 13482523 - Bda026297.1 Bda07g01133 10023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01133 692 CDD AP2 365 424 IPR001471 GO:0003700|GO:0006355
Bda07g01133 692 MobiDBLite consensus disorder prediction 186 237 - -
Bda07g01133 692 SUPERFAMILY DNA-binding domain 365 425 IPR016177 GO:0003677
Bda07g01133 692 Gene3D AP2/ERF domain 261 332 IPR036955 GO:0003700|GO:0006355
Bda07g01133 692 Gene3D AP2/ERF domain 366 426 IPR036955 GO:0003700|GO:0006355
Bda07g01133 692 PANTHER BNAC02G44180D PROTEIN 5 690 - -
Bda07g01133 692 MobiDBLite consensus disorder prediction 172 243 - -
Bda07g01133 692 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 5 690 - -
Bda07g01133 692 CDD AP2 260 332 IPR001471 GO:0003700|GO:0006355
Bda07g01133 692 Pfam AP2 domain 261 322 IPR001471 GO:0003700|GO:0006355
Bda07g01133 692 Pfam AP2 domain 366 416 IPR001471 GO:0003700|GO:0006355
Bda07g01133 692 ProSiteProfiles AP2/ERF domain profile. 366 424 IPR001471 GO:0003700|GO:0006355
Bda07g01133 692 SUPERFAMILY DNA-binding domain 260 332 IPR016177 GO:0003677
Bda07g01133 692 ProSiteProfiles AP2/ERF domain profile. 261 330 IPR001471 GO:0003700|GO:0006355
Bda07g01133 692 PRINTS Ethylene responsive element binding protein signature 262 273 IPR001471 GO:0003700|GO:0006355
Bda07g01133 692 PRINTS Ethylene responsive element binding protein signature 406 426 IPR001471 GO:0003700|GO:0006355
Bda07g01133 692 SMART rav1_2 261 336 IPR001471 GO:0003700|GO:0006355
Bda07g01133 692 SMART rav1_2 366 430 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00668 Bda-Chr1:33698071 Bda07g01133 Bda-Chr7:13478377 8.96E-118 dispersed
Bda07g01133 Bda-Chr7:13478377 Bda09g00309 Bda-Chr9:3852688 5.57E-127 dispersed
Bda11g01553 Bda-Chr11:48349637 Bda07g01133 Bda-Chr7:13478377 5.30E-09 dispersed
Bda07g01133 Bda-Chr7:13478377 Bda03g00160 Bda-Chr3:1319585 6.35E-109 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16150 PF00847 AP2 1.20E-06 CL0081 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01133 K09285 - qsu:111984882 836.639