Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01164 ATGGCCTCTCTTTCCTGCTCCGCCGTTGATTTGGTGCCTCTGCTCGGCGCCACGAGCTCCAACTCCACAGCCATGGCGGAGTTCTTCTGTACAAGATTCAACGCCATAGCCAACAAGCTTTCCGACACTACTTATGCAGTGGATAATACTTATCTCTTATTCTCTGCGTATCTGGTTTTCGCTATGCAGCTTGGATTCGCCATGCTTTGCGCTGGATCTGTTCGAGCGAAGAACACGATGAACATTATGCTCACCAACGTCCTTGACGCCGCCGCTGGAGGCCTCTCCTACTACCTCTTTGGTTACGCTTTCGCCTTTGGATCGCCTTCTAATGGCTTCATCGGCCGTCATTTTTTCGGTCTCAGTGGTTTTCCGTCGGTGTTGGCAGATTACAGTTTCTTTCTCTTCCAGTGGGCTTTCGCGATCGCCGCCGCCGGAATTACCAGCGGTTCAATCGCCGAGAGAACGCAGTTTGTTGCTTATCTTATATACTCCTCTTTCTTGACTGGTTTCGTCTACCCGGTTGTGTCTCATTGGTTCTGGTCAGCTGACGGGTGGGCTAGCCCGAGCCGAAGCGACAATAACTTACTGTTCGGGTCCGGGGCGATTGACTTCGCCGGATCAGGAGTTGTTCACATGGTGGGCGGGATAGCCGGGTTGTGGGGCGCATTAATCGAAGGCCCACGAATAGGCCGGTTCGACCGATCCGGACGATCCGTCGCGTTGCGTGGACACAGCGCGTCACTAGTTGTTCTCGGATCATTTTTACTTTGGTTCGGTTGGTACGGGTTTAACCCGGGATCGTTTCTGACGATCTTGAAAGCGTACGGCGACGGAGGTAACTACTACGGACAGTGGAGTGCCGTCGGGCGAACAGCAGTCACGACCACACTGGCTGGTTGCACGGCAGCACTCACAACGCTATTCGGGAAGCGCTTAATCGCCGGCCACTGGAACGTCACCGACGTGTGCAATGGACTACTCGGGGGTTTCGCCGCCATCACCTCCGGCTGCTCAGTGGTTGAACCATGGGCGGCAATAATCTGCGGATTCATCGCCGCCTGGGTTTTAATCGGGTTCAACATGCTCGCAGAGAAGTTCAACTACGACGATCCTCTCGAAGCGGCGCAACTCCACGGTGGATGCGGGTCGTGGGGGTTGATATCCACCGGGCTCTTTGCCAAGGAGGCTTACGTCAATGAGGTCTACTCGAACAAGGTGGGGAGACCGTACGGGCTATTCATGGGCGGCGGAGGGAAACTACTGGCGGCCCAAATCATCCAGATCTTGGTGATCACTGGGTGGGTCTCGGCCACGATGGCCCCGCTATTTTATGGTATGCATAAACTGAAGATATTGAGGATATCAAGAGATGATGAGATGGCAGGTATGGATCTGACTAGGCATGGAGGCTTTGCTTACGTGTACCACGATCAGGATGACGGGTCGGGGAGTAAGCCCGGGTTTATGATGAGCAAGGTGGAGCCCAATTCAGGAAGTCCGGTTAGCGATCAGAAACTCTCTCCCAGGGCCGTCTGA 1539 54.52 MASLSCSAVDLVPLLGATSSNSTAMAEFFCTRFNAIANKLSDTTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGYAFAFGSPSNGFIGRHFFGLSGFPSVLADYSFFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSADGWASPSRSDNNLLFGSGAIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRSGRSVALRGHSASLVVLGSFLLWFGWYGFNPGSFLTILKAYGDGGNYYGQWSAVGRTAVTTTLAGCTAALTTLFGKRLIAGHWNVTDVCNGLLGGFAAITSGCSVVEPWAAIICGFIAAWVLIGFNMLAEKFNYDDPLEAAQLHGGCGSWGLISTGLFAKEAYVNEVYSNKVGRPYGLFMGGGGKLLAAQIIQILVITGWVSATMAPLFYGMHKLKILRISRDDEMAGMDLTRHGGFAYVYHDQDDGSGSKPGFMMSKVEPNSGSPVSDQKLSPRAV 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13855341 13856879 + Bda026329.1 Bda07g01164 10054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01164 512 Gene3D Ammonium transporter AmtB like domains 27 488 IPR029020 -
Bda07g01164 512 PANTHER AMMONIUM TRANSPORTER 1 505 - -
Bda07g01164 512 SUPERFAMILY Ammonium transporter 45 455 - -
Bda07g01164 512 PANTHER AMMONIUM TRANSPORTER 1 505 - -
Bda07g01164 512 MobiDBLite consensus disorder prediction 485 512 - -
Bda07g01164 512 ProSitePatterns Ammonium transporters signature. 204 229 IPR018047 GO:0008519|GO:0016020|GO:0072488
Bda07g01164 512 Pfam Ammonium Transporter Family 51 474 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bda07g01164 512 TIGRFAM amt: ammonium transporter 48 474 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00852 Bda-Chr2:49006320 Bda07g01164 Bda-Chr7:13855341 0 dispersed
Bda07g01164 Bda-Chr7:13855341 Bda12g00685 Bda-Chr12:33348517 0 dispersed
Bda07g01164 Bda-Chr7:13855341 Bda05g00875 Bda-Chr5:57197472 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01164 K03320 K07573 zju:107412282 837.025