Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda07g01182 | ATGGATTCCTCTGTCTTCTTCTTCTCTGATTCTTCTTCTTTTTCCTCTTCAATGGAGTCTTTCTCGTGGAAATCTAGCCTTCATTTGGAGAACAATCTCTTACCTTTCAATCAGAACGATTCCGAAGAAATGCTTCTTTACGGAGTTCTTACTGAGCCCGTCACCAATCGTTCTTCCGATTCTAATTTCTCGTCAAATTTCTCGAACGATCAGGACGAGGTGGATTCGGAATCTACGAAAGAGTCGGAGGTTTGTTACAGAGGAGTGAGGAGAAGGCCGTGGGGAAAATTCGCGGCGGAGATCAGAGATTCCACGAGAAATGGAGTTAGGGTTTGGTTGGGGACTTTCGACACGGCGGAGGCGGCGGCGCTGGCGTACGATCAAGCGGCGTTCGCGATGCGAGGCTCAAGCGCGGTGCTTAATTTCCCGGCGCAAATGGTGGAGCAATCGCTGCGCGAGATGAATTACGGAGCGGAGGAGGGAAGTTCCCCTGTTCTGGCTCTGAAGAAGAGGCATTCGATGAAGAAAAAACCTAAAAATTCGAAGACGAAGAAGAAGGAGAACGATTCGGTTTCGGAAAACGTGGTGGTGTTTGAAGATTTGGGGGCTGAGTACTTGGAAGAACTTTTGGGATTGTACGAAGCTTCTTCCAATCCATGGTGA | 663 | 48.57 | MDSSVFFFSDSSSFSSSMESFSWKSSLHLENNLLPFNQNDSEEMLLYGVLTEPVTNRSSDSNFSSNFSNDQDEVDSESTKESEVCYRGVRRRPWGKFAAEIRDSTRNGVRVWLGTFDTAEAAALAYDQAAFAMRGSSAVLNFPAQMVEQSLREMNYGAEEGSSPVLALKKRHSMKKKPKNSKTKKKENDSVSENVVVFEDLGAEYLEELLGLYEASSNPW | 220 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 14229198 | 14229860 | - | Bda026357.1 | Bda07g01182 | 10072 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda07g01182 | 220 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B | 27 | 212 | - | - | |
Bda07g01182 | 220 | MobiDBLite | consensus disorder prediction | 56 | 72 | - | - | |
Bda07g01182 | 220 | SMART | rav1_2 | 85 | 149 | IPR001471 | GO:0003700|GO:0006355 | |
Bda07g01182 | 220 | Pfam | AP2 domain | 85 | 135 | IPR001471 | GO:0003700|GO:0006355 | |
Bda07g01182 | 220 | CDD | AP2 | 86 | 145 | IPR001471 | GO:0003700|GO:0006355 | |
Bda07g01182 | 220 | PANTHER | DNA-BINDING DOMAIN | 27 | 212 | IPR044808 | GO:0003700|GO:0009873 | |
Bda07g01182 | 220 | MobiDBLite | consensus disorder prediction | 167 | 190 | - | - | |
Bda07g01182 | 220 | Gene3D | AP2/ERF domain | 85 | 145 | IPR036955 | GO:0003700|GO:0006355 | |
Bda07g01182 | 220 | MobiDBLite | consensus disorder prediction | 56 | 79 | - | - | |
Bda07g01182 | 220 | ProSiteProfiles | AP2/ERF domain profile. | 85 | 143 | IPR001471 | GO:0003700|GO:0006355 | |
Bda07g01182 | 220 | SUPERFAMILY | DNA-binding domain | 85 | 144 | IPR016177 | GO:0003677 | |
Bda07g01182 | 220 | PRINTS | Ethylene responsive element binding protein signature | 86 | 97 | IPR001471 | GO:0003700|GO:0006355 | |
Bda07g01182 | 220 | PRINTS | Ethylene responsive element binding protein signature | 109 | 125 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda05g00850 | Bda-Chr5:57029235 | Bda07g01182 | Bda-Chr7:14229198 | 2.39E-53 | dispersed | |
Bda07g01182 | Bda-Chr7:14229198 | Bda08g00273 | Bda-Chr8:2834233 | 2.94E-50 | dispersed | |
Bda07g01182 | Bda-Chr7:14229198 | Bda13g00069 | Bda-Chr13:938904 | 6.72E-64 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16155 | PF00847 | AP2 | 1.20E-15 | CL0081 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda07g01182 | K14516 | - | qsu:112003251 | 201.445 |