Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01182 ATGGATTCCTCTGTCTTCTTCTTCTCTGATTCTTCTTCTTTTTCCTCTTCAATGGAGTCTTTCTCGTGGAAATCTAGCCTTCATTTGGAGAACAATCTCTTACCTTTCAATCAGAACGATTCCGAAGAAATGCTTCTTTACGGAGTTCTTACTGAGCCCGTCACCAATCGTTCTTCCGATTCTAATTTCTCGTCAAATTTCTCGAACGATCAGGACGAGGTGGATTCGGAATCTACGAAAGAGTCGGAGGTTTGTTACAGAGGAGTGAGGAGAAGGCCGTGGGGAAAATTCGCGGCGGAGATCAGAGATTCCACGAGAAATGGAGTTAGGGTTTGGTTGGGGACTTTCGACACGGCGGAGGCGGCGGCGCTGGCGTACGATCAAGCGGCGTTCGCGATGCGAGGCTCAAGCGCGGTGCTTAATTTCCCGGCGCAAATGGTGGAGCAATCGCTGCGCGAGATGAATTACGGAGCGGAGGAGGGAAGTTCCCCTGTTCTGGCTCTGAAGAAGAGGCATTCGATGAAGAAAAAACCTAAAAATTCGAAGACGAAGAAGAAGGAGAACGATTCGGTTTCGGAAAACGTGGTGGTGTTTGAAGATTTGGGGGCTGAGTACTTGGAAGAACTTTTGGGATTGTACGAAGCTTCTTCCAATCCATGGTGA 663 48.57 MDSSVFFFSDSSSFSSSMESFSWKSSLHLENNLLPFNQNDSEEMLLYGVLTEPVTNRSSDSNFSSNFSNDQDEVDSESTKESEVCYRGVRRRPWGKFAAEIRDSTRNGVRVWLGTFDTAEAAALAYDQAAFAMRGSSAVLNFPAQMVEQSLREMNYGAEEGSSPVLALKKRHSMKKKPKNSKTKKKENDSVSENVVVFEDLGAEYLEELLGLYEASSNPW 220
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14229198 14229860 - Bda026357.1 Bda07g01182 10072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01182 220 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 27 212 - -
Bda07g01182 220 MobiDBLite consensus disorder prediction 56 72 - -
Bda07g01182 220 SMART rav1_2 85 149 IPR001471 GO:0003700|GO:0006355
Bda07g01182 220 Pfam AP2 domain 85 135 IPR001471 GO:0003700|GO:0006355
Bda07g01182 220 CDD AP2 86 145 IPR001471 GO:0003700|GO:0006355
Bda07g01182 220 PANTHER DNA-BINDING DOMAIN 27 212 IPR044808 GO:0003700|GO:0009873
Bda07g01182 220 MobiDBLite consensus disorder prediction 167 190 - -
Bda07g01182 220 Gene3D AP2/ERF domain 85 145 IPR036955 GO:0003700|GO:0006355
Bda07g01182 220 MobiDBLite consensus disorder prediction 56 79 - -
Bda07g01182 220 ProSiteProfiles AP2/ERF domain profile. 85 143 IPR001471 GO:0003700|GO:0006355
Bda07g01182 220 SUPERFAMILY DNA-binding domain 85 144 IPR016177 GO:0003677
Bda07g01182 220 PRINTS Ethylene responsive element binding protein signature 86 97 IPR001471 GO:0003700|GO:0006355
Bda07g01182 220 PRINTS Ethylene responsive element binding protein signature 109 125 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00850 Bda-Chr5:57029235 Bda07g01182 Bda-Chr7:14229198 2.39E-53 dispersed
Bda07g01182 Bda-Chr7:14229198 Bda08g00273 Bda-Chr8:2834233 2.94E-50 dispersed
Bda07g01182 Bda-Chr7:14229198 Bda13g00069 Bda-Chr13:938904 6.72E-64 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16155 PF00847 AP2 1.20E-15 CL0081 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01182 K14516 - qsu:112003251 201.445