Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda07g01202 | ATGGATAGGAACACACATGAGGGGATTGGGGATGATTTCTTCGAGCAGATTTTAGCTGTGCCTCCCGCTTTTAACGGTGGAGAGTCGGCCGAGTATGGCGGAAGTGAGGCGAGCTCTGTGGCTATGGCGTTACAGTTAGGGTCTGGAGTGGGAGGAGGAAGAGACGATTGCGGTGGCTCTGGTGGTGGATTGAGAGGGATCGCCATGCAAGGCTTGGGTATGCCTCTTGGATTGAACTTGGAACAGAGCTTTTTGAGGCGAGAGAGATTTGGAGAAGAGATTGAAGCTAATAGTCGTAACAATGCGAATAATAATGCTGCTTCTTCTGCTACTTCTGGAATTTCTGAAAGAGATTCTGTGCATATGAACGCTTTATTAGCAACTTTTGGACATGTACAGTGTCGGTCTTTTCGACCGGAGCAACCTCCTTCCCAACTCCATCAGCCCTTTCATTGTCAACCAATCTCTGGGCAAATTCCTGCTGTGTCCCAGCCACCCACAATCCGACCTCGTGTTCGAGCAAGGAGAGGCCAAGCGACAGATCCTCACAGCATTGCTGAGAGGTTGCGAAGGGAAAGAATTGCAGAAAGAATGAAGGCTTTGCAGGAGTTGGTTCCTAGCTGTAACAAGTCAGATAGGGCAGCTATGCTTGATGAAATTGTGGATTATGTAAAGTTTCTAAGGCTTCAAGTCAAGGTTCTGAGCATGAGCAGATTAGGTGGAACGGGTGCAGTGGCTCAGCTCATTTCGGATGTGCCTGGAACGGGTGTGGTTGAGGGAATTGAAGGTGGAACTAATCAACAAGCTTGGGAAAAATGGTCAACTGATGGAACAGAGCAACAAGTAGCCAAATTGATGGAAGAAGACATCGGAGCTGCAATGCAATTGCTTCAATCCAAGGCTCTATGCATTATGCCCATATCATTAGCTTCAGCAATTTTCCGAACACACCAACCGGACACTCAAATGACCATTAAGCCAGAATCCGACTCCCAATAA | 999 | 47.65 | MDRNTHEGIGDDFFEQILAVPPAFNGGESAEYGGSEASSVAMALQLGSGVGGGRDDCGGSGGGLRGIAMQGLGMPLGLNLEQSFLRRERFGEEIEANSRNNANNNAASSATSGISERDSVHMNALLATFGHVQCRSFRPEQPPSQLHQPFHCQPISGQIPAVSQPPTIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKSDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGTGAVAQLISDVPGTGVVEGIEGGTNQQAWEKWSTDGTEQQVAKLMEEDIGAAMQLLQSKALCIMPISLASAIFRTHQPDTQMTIKPESDSQ | 332 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 14414824 | 14419349 | - | Bda026377.1 | Bda07g01202 | 10092 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda07g01202 | 332 | MobiDBLite | consensus disorder prediction | 95 | 114 | - | - | |
| Bda07g01202 | 332 | SMART | finulus | 184 | 233 | IPR011598 | GO:0046983 | |
| Bda07g01202 | 332 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 176 | 237 | IPR036638 | GO:0046983 | |
| Bda07g01202 | 332 | PANTHER | DEHYDROGENASE, PUTATIVE, EXPRESSED-RELATED | 7 | 321 | - | - | |
| Bda07g01202 | 332 | Gene3D | - | 173 | 235 | IPR036638 | GO:0046983 | |
| Bda07g01202 | 332 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 7 | 321 | - | - | |
| Bda07g01202 | 332 | MobiDBLite | consensus disorder prediction | 96 | 114 | - | - | |
| Bda07g01202 | 332 | Pfam | Helix-loop-helix DNA-binding domain | 183 | 227 | IPR011598 | GO:0046983 | |
| Bda07g01202 | 332 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 178 | 227 | IPR011598 | GO:0046983 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda04g00536 | Bda-Chr4:53987459 | Bda07g01202 | Bda-Chr7:14414824 | 1.07E-86 | dispersed | |
| Bda07g01202 | Bda-Chr7:14414824 | Bda10g00545 | Bda-Chr10:39329297 | 8.77E-85 | dispersed | |
| Bda01g01945 | Bda-Chr1:55838157 | Bda07g01202 | Bda-Chr7:14414824 | 1.97E-60 | transposed | |
| Bda12g00371 | Bda-Chr12:4266003 | Bda07g01202 | Bda-Chr7:14414824 | 1.10E-179 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 16156 | PF00010 | HLH | 2.00E-07 | No_clan | Bda | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda07g01202 | - | - | zju:107412218 | 399.823 |