Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda07g01246 | ATGGCGCTTGAAGCTGTGGTTTTTCAGCAAGACCCTGTTGGCTATAATGGCAGCAGAGATCTATACACCTTGTTGGTAGGACATGGTTGGAGAGAAGAAAGTTATGATCAAGGTGATTTTCGCGGGAGCCAAACAGAAAGTGATGTCCTTTTTGGTGATAATAGCAGCTTTTCGCCACCTTCGTCAATGGCGTCCAACTGGAACGAACTGCTACAAAACTCCAATGGAAGTGGGAAACTTCCGGGAGAGATTTCGCCGGATATTCGTCCGACGAGAAGACGACGATCGAAAAGCAGGAAAAACAAGGAAGAGATTGAGAATCAGAGAATGACCCACATTGCTGTTGAGAGGAATCGGAGAAAGTTGATGAATGAGTATCTCTCTGTGCTCCGGTCTCTGATGCCTGATTCTTATGTTCAAAGGGGCGATCAAGCCTCGATAATCGGAGGAGCCATTAATTTCGTGAAGGAGCTAGAACAGAAAGTGCATTTTCTCAGCAGCCAAACGGCAACCACAAAGCTAGAAAATTCCACAGAAGAAAACGACCCATCAATGCCGTTCTCCGAATTCTTCAGTTTTCCTCAGTACTCAACAACCTCGTCCCTCTCTTCCCCTCCTTCCGCCATTGGAGAACAGACCAAAACCTCCATTGCCGACATTGAAGTAAACATGGTAGAAAGCCACGCGAATATCAAAATAAGATCGAAAAGAAAGCCTAAACAGCTACTAAACATAGTGGCTGGTTTGCAGAGTTTGCATCTCACTGTTCTTCATCTGAATCTCACAACTTTGGATCAAATCATTCTGTATTCTCTAAGTGTGAAGGTGGAAGATGGTTGTAAGCTGTGTTCAGCAGATGAAATAGCTGCAGCTTTGTATGAATTGATGAGCAGAATTCAAGAGGAGGGAAATTCATTGTTTAGTTGA | 927 | 44.12 | MALEAVVFQQDPVGYNGSRDLYTLLVGHGWREESYDQGDFRGSQTESDVLFGDNSSFSPPSSMASNWNELLQNSNGSGKLPGEISPDIRPTRRRRSKSRKNKEEIENQRMTHIAVERNRRKLMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVHFLSSQTATTKLENSTEENDPSMPFSEFFSFPQYSTTSSLSSPPSAIGEQTKTSIADIEVNMVESHANIKIRSKRKPKQLLNIVAGLQSLHLTVLHLNLTTLDQIILYSLSVKVEDGCKLCSADEIAAALYELMSRIQEEGNSLFS | 308 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 15306859 | 15307954 | - | Bda026444.1 | Bda07g01246 | 10136 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda07g01246 | 308 | MobiDBLite | consensus disorder prediction | 71 | 105 | - | - | |
Bda07g01246 | 308 | PANTHER | MAX DIMERIZATION, MAD | 1 | 302 | - | - | |
Bda07g01246 | 308 | Pfam | Helix-loop-helix DNA-binding domain | 108 | 159 | IPR011598 | GO:0046983 | |
Bda07g01246 | 308 | PANTHER | HELIX-LOOP-HELIX-LIKE PROTEIN | 1 | 302 | - | - | |
Bda07g01246 | 308 | SMART | finulus | 113 | 164 | IPR011598 | GO:0046983 | |
Bda07g01246 | 308 | Gene3D | - | 97 | 176 | IPR036638 | GO:0046983 | |
Bda07g01246 | 308 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 107 | 158 | IPR011598 | GO:0046983 | |
Bda07g01246 | 308 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 107 | 175 | IPR036638 | GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda06g01292 | Bda-Chr6:43526317 | Bda07g01246 | Bda-Chr7:15306859 | 5.32E-52 | dispersed | |
Bda07g01246 | Bda-Chr7:15306859 | Bda11g00398 | Bda-Chr11:4316949 | 1.57E-59 | dispersed | |
Bda07g01246 | Bda-Chr7:15306859 | Bda08g00632 | Bda-Chr8:6507919 | 1.48E-70 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16161 | PF00010 | HLH | 4.40E-09 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda07g01246 | - | - | qsu:112010387 | 302.753 |