Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda07g01249 | ATGGATCCTCAAGGACCAAGCCAACCTCCGTCGATGGGGGTGGTTGGGGGCGGGCTTCAATTTCCTTACGGTTCGAGTTTTTACGAGCCGAACCAGATCGCTGGAACCCAAAGTGCAGGGCCAATGATCGGAGCCGTTCAATCCGCAAGCCAGCCCGGGGGACCCCAGCTAGCATTTCAGCAGATGCATCAGCAACTCCAGCAGCAGCTCCAGAACTTCTGGGAGAATCAGAGCCGTGAAATCGAGAAGGTGACAGATTTCAAAAACCATAGCCTCCCATTGGCCAGGATCAAGAAGATCATGAAGGCCGACGAAGATGTGCGGATGATCTCGGCCGAGGCCCCCGTCGTGTTTGCTAGGGCTTGTGAAATGTTCATCTTGGAATTGACCCTCCGATCGTGGAATCACACGGAGGAGAACAAACGGAGGACGCTCCAGAAGAACGACATCGCAGCCGCAATCACAAGAACTGATATCTTTGACTTTTTGGTTGACATTGTCCCGAGGGACGATCCAAAAGATGAAGTGCTCGCCTCCTTCCCTCGGGGAGCTATGCCGGTTGGGGGCCCGGTCGACGGGATCCCGTACGACATGCCACCTCAGCATCCAGGGATGATGGCAGGGATGTACGCCCCTCCACCTCACCCCTACATGGTCCCGCAAATGTGGCCTCACGTACCGGATCAACATCAATCGAGTTCCGATCAGTAG | 711 | 55.41 | MDPQGPSQPPSMGVVGGGLQFPYGSSFYEPNQIAGTQSAGPMIGAVQSASQPGGPQLAFQQMHQQLQQQLQNFWENQSREIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDDPKDEVLASFPRGAMPVGGPVDGIPYDMPPQHPGMMAGMYAPPPHPYMVPQMWPHVPDQHQSSSDQ | 236 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 15332462 | 15333172 | + | Bda026448.1 | Bda07g01249 | 10139 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda07g01249 | 236 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 | 1 | 236 | - | - | |
Bda07g01249 | 236 | SUPERFAMILY | Histone-fold | 66 | 163 | IPR009072 | GO:0046982 | |
Bda07g01249 | 236 | Gene3D | Histone, subunit A | 56 | 169 | IPR009072 | GO:0046982 | |
Bda07g01249 | 236 | PANTHER | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED | 1 | 236 | - | - | |
Bda07g01249 | 236 | Pfam | Core histone H2A/H2B/H3/H4 | 60 | 154 | IPR007125 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g01249 | Bda-Chr7:15332462 | Bda15g00051 | Bda-Chr15:1980174 | 1.01E-67 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16162 | PF00808 | CBFD_NFYB_HMF | 3.90E-18 | CL0012 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda07g01249 | K08066 | - | csv:101209664 | 315.079 |