Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01249 ATGGATCCTCAAGGACCAAGCCAACCTCCGTCGATGGGGGTGGTTGGGGGCGGGCTTCAATTTCCTTACGGTTCGAGTTTTTACGAGCCGAACCAGATCGCTGGAACCCAAAGTGCAGGGCCAATGATCGGAGCCGTTCAATCCGCAAGCCAGCCCGGGGGACCCCAGCTAGCATTTCAGCAGATGCATCAGCAACTCCAGCAGCAGCTCCAGAACTTCTGGGAGAATCAGAGCCGTGAAATCGAGAAGGTGACAGATTTCAAAAACCATAGCCTCCCATTGGCCAGGATCAAGAAGATCATGAAGGCCGACGAAGATGTGCGGATGATCTCGGCCGAGGCCCCCGTCGTGTTTGCTAGGGCTTGTGAAATGTTCATCTTGGAATTGACCCTCCGATCGTGGAATCACACGGAGGAGAACAAACGGAGGACGCTCCAGAAGAACGACATCGCAGCCGCAATCACAAGAACTGATATCTTTGACTTTTTGGTTGACATTGTCCCGAGGGACGATCCAAAAGATGAAGTGCTCGCCTCCTTCCCTCGGGGAGCTATGCCGGTTGGGGGCCCGGTCGACGGGATCCCGTACGACATGCCACCTCAGCATCCAGGGATGATGGCAGGGATGTACGCCCCTCCACCTCACCCCTACATGGTCCCGCAAATGTGGCCTCACGTACCGGATCAACATCAATCGAGTTCCGATCAGTAG 711 55.41 MDPQGPSQPPSMGVVGGGLQFPYGSSFYEPNQIAGTQSAGPMIGAVQSASQPGGPQLAFQQMHQQLQQQLQNFWENQSREIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDDPKDEVLASFPRGAMPVGGPVDGIPYDMPPQHPGMMAGMYAPPPHPYMVPQMWPHVPDQHQSSSDQ 236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15332462 15333172 + Bda026448.1 Bda07g01249 10139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01249 236 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 1 236 - -
Bda07g01249 236 SUPERFAMILY Histone-fold 66 163 IPR009072 GO:0046982
Bda07g01249 236 Gene3D Histone, subunit A 56 169 IPR009072 GO:0046982
Bda07g01249 236 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 236 - -
Bda07g01249 236 Pfam Core histone H2A/H2B/H3/H4 60 154 IPR007125 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01249 Bda-Chr7:15332462 Bda15g00051 Bda-Chr15:1980174 1.01E-67 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16162 PF00808 CBFD_NFYB_HMF 3.90E-18 CL0012 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01249 K08066 - csv:101209664 315.079