Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01281 ATGTCGTTGGAAAAGTTGATTGCTGCCGGTGCTCCTCAGTCTGAGGCAGCGCCGCCGGAATCTATTTCTGTCTCTCACTCGTTCCGGCAATGGAGCGAACATACTTGGATTTTCGAGGAGCTTCCCACGGCAGACATTGTTTCGGTGTCCCCTCCTGATTCTGCAGATTTTACCCCCATGCTGCTGTCCTACACTATTGAGATTCACTATAAACAGAAGCTAATCGCCATTTTCTTTAACTGGCGCTTGGTGAAGAAAGCTTCACAGGTTCTTTACTTACATTTTGCTTTGAAGAAACGTGCTATTATTGAAGATATTCAAGAGAAACAAGAGCAGGTGAAAGAATGGCTTCAAAGTTTAGGAATAGCAGATCAAGCAGCAGTTGTCCTTGACGCTGATGAACCTGATGATGGAGCCTTTCCTTTACACAGCGAAGATGGCGTCAGAAACAGGGACGTTCCATCCATTGCTGCTTTACCGATCATTCGGCCAGCACTGGGAAGGCATCAGAGCATTTCAGACACGGCAAAGATAGCAATGCAGAATTATTTGAACCATTTTCTTGGAAACATGGACATTGTGAATTCTCGTGAGGTCTGCAAATTTCTAGAAGTCTCCAAAATGTCATTCTTGAGAGAATACGGTCCGAAGTTAAAGGAAGGCTATTTAATGGTGAACCATTTGAAGAAGCTTTCTAGAGTAGATTCTGCTTTAAAATGTTTTCCTTTCTTTTGTTTCGGTTGCTGGGAAGACGATTGGAAAAAGGTCTGGGGTGTTTTAAAACCTGGATTCTTGGCTCTCCTGGATGACCCATTCAATGCTAACCTTTTAGATATAATAGTTTTTGATGTCCTGCCTGCCGTAGATGGAAAAAAGGCTCCTAAAGTTTGTTTAGCAAATGTTGTCAAAGAGCACAATCCTTTAAGATATTCATTTAAGGTTACACAAGGAAATGGCAGCATGAAGATTAGAACCACTAGTAGTGTTAAGGCTAAAGACTGGATTTCAGCAATTAATGATGCTGGTATGAGGCCTCTAGAGGGCTGGTGTCGTCCACATCGCTTCGATTCCTTTGCTCCTCAAAGAGGTCTGAGCAATGATGGGAGCCTAGGTCAATGGTTTATAGATGGCAAAGCAGCATTTGAAGCGATTGCTTCTGCCATTGAGAATGCAAAATCCGAGATATTCATGACTGGTTGGTGGCTTTGTCCAGAGCTTTATCTACGGCGTCCTTTTGATCTTCATTCTTCCTCACGACTCGATACATTACTGGAAGCAAAAGCGAAGGGTGGGGTTAAGAGAAATAAAGCCCCAAATGAACAAACAATTCCTCTACTAATGCCTCATCATCATATTGTCATCCCTCATTACATGGGAAGAAGTGAAGAAATGGACATTCCAAAGAACACCAGAGAAGAAGACGTAAACAGGCAGGATTCCTTTCTATCACGATCATCCCTTCAAGATATCCCATTACTTTTGCCTCAGGAAGCTGACAGACTTCTGAATTCCAATGTTCAAACGAAGCTTGTTAACAAATGTGAGAGGAATCCTAATCTTCATGAACAGTTGACTGAGGTTGGAGGAAGTTTTTCATTTTCTCACCAAAATCCCAAAGTTGAGTCCTTGTCTCCGCATGCACAGACGAAAGACTTTGGAGGTGACTTTGAGTTTATGAATGTTTTTGATAGCGAGAGGAGGCCAGATGACGAAGACCATGATGTTGAAGATGACACTGGAGAAGTTGGTCCTCCTATAGCATGTCGTTGTCAGGTAGTAAGAAGTGTCAGCTATTGGTCAGATGGAACTGGTAAACCAGAAGAAAGCATTCATAAAGCTTACTGTTCTCTCATCGAGGAGGCAGAACATTTTATTTACATAGAGAATCAATTTTTTATATCAGGTCTTTCAGGAGATGAAATTGTACAAAATCGTATCCTAGAAGCACTATATCGACGTATTTTACGGGCATATAAAAGTGATAAATGTTTTAGGGTCATTGTTGTCATACCACTCATACCTGGATTTCAGGGTGGCGTGGATGACAATGGGGCAGCAACTGTAAGAGCCCTGATGCATTGGCAATATCGAACAATAAGCCAGACAAAGACTTCAATAATGCATAATCTCAATGCTTTACTCGGTCCTAAAGCACATGATTACATCTCATTTTATGGCCTCAGATCACATGGTATACTTTTTAATGGCGGCCCTATTGCCACAAGTCAGGTATGTTCTATTGGAAGTAATGTGCAATTCTTGGCTACAGACTTAAAGCTTGTACTACACTGTATAATTGTGTTTCAGGTGTACGTTCACAGCAAATTGATGATAATTGACGATAGAATTTCAGTGATTGGATCGTCAAATATTAATGATAGGAGTTTGCTTGGATCAAGAGACTCAGAGATTGCGATGGTGCTTGAGGATAAAGAGTTTGTTGAGTCAGCAATGGATGGAAAACCATGGAAAGCTGGGAAATTTTCTTACAGCCTTCGATGCGCTTTGTGGTCTGAGCACCTTGGTCTTCAACCAAGAGAGATTGATAAAATCAGCGATCCAGTAGCAGAAACAACATATAGAGATTTATGGTTAGCAACGGCTAAGGAGAATACAAGGATCTATCAAGATGTCTTTGGCTGCATTCCAAATGATAATATAAAATCAAGATCAGCTTTAAGACAGAACATGGCTTTTTGGAAGGAGAAACTTGGTCACACTACCATAGATTTAGGACTAGCCTCGGAGAAGCTCGAAACCTGCGAGAATGGAGGAGAAGTTAAGGTGACAGATTTAGGAGAGATGCTCAAGTCTGTGAGGGGATTTCTTGTTTGTTTCCCATTAGAGTTCATGAGTCAAGAAGATTTAAGGCCATTTTTCAATGAAAGTGAGTTTTATGCTCCTCAGGTGTTTCTTTAA 2919 41.32 MSLEKLIAAGAPQSEAAPPESISVSHSFRQWSEHTWIFEELPTADIVSVSPPDSADFTPMLLSYTIEIHYKQKLIAIFFNWRLVKKASQVLYLHFALKKRAIIEDIQEKQEQVKEWLQSLGIADQAAVVLDADEPDDGAFPLHSEDGVRNRDVPSIAALPIIRPALGRHQSISDTAKIAMQNYLNHFLGNMDIVNSREVCKFLEVSKMSFLREYGPKLKEGYLMVNHLKKLSRVDSALKCFPFFCFGCWEDDWKKVWGVLKPGFLALLDDPFNANLLDIIVFDVLPAVDGKKAPKVCLANVVKEHNPLRYSFKVTQGNGSMKIRTTSSVKAKDWISAINDAGMRPLEGWCRPHRFDSFAPQRGLSNDGSLGQWFIDGKAAFEAIASAIENAKSEIFMTGWWLCPELYLRRPFDLHSSSRLDTLLEAKAKGGVKRNKAPNEQTIPLLMPHHHIVIPHYMGRSEEMDIPKNTREEDVNRQDSFLSRSSLQDIPLLLPQEADRLLNSNVQTKLVNKCERNPNLHEQLTEVGGSFSFSHQNPKVESLSPHAQTKDFGGDFEFMNVFDSERRPDDEDHDVEDDTGEVGPPIACRCQVVRSVSYWSDGTGKPEESIHKAYCSLIEEAEHFIYIENQFFISGLSGDEIVQNRILEALYRRILRAYKSDKCFRVIVVIPLIPGFQGGVDDNGAATVRALMHWQYRTISQTKTSIMHNLNALLGPKAHDYISFYGLRSHGILFNGGPIATSQVCSIGSNVQFLATDLKLVLHCIIVFQVYVHSKLMIIDDRISVIGSSNINDRSLLGSRDSEIAMVLEDKEFVESAMDGKPWKAGKFSYSLRCALWSEHLGLQPREIDKISDPVAETTYRDLWLATAKENTRIYQDVFGCIPNDNIKSRSALRQNMAFWKEKLGHTTIDLGLASEKLETCENGGEVKVTDLGEMLKSVRGFLVCFPLEFMSQEDLRPFFNESEFYAPQVFL 972
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15658298 15665817 + Bda026487.1 Bda07g01281 10171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01281 972 SUPERFAMILY PH domain-like 249 341 - -
Bda07g01281 972 PANTHER PHOSPHOLIPASE D ZETA 2 25 433 - -
Bda07g01281 972 PANTHER PHOSPHOLIPASE D ZETA 2 433 969 - -
Bda07g01281 972 SUPERFAMILY Phospholipase D/nuclease 341 433 - -
Bda07g01281 972 ProSiteProfiles PH domain profile. 216 343 IPR001849 -
Bda07g01281 972 Gene3D Endonuclease Chain A 567 831 - -
Bda07g01281 972 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 768 795 IPR001736 GO:0003824
Bda07g01281 972 Pfam PLD-like domain 770 815 IPR025202 -
Bda07g01281 972 PIRSF PLD_euk 457 762 IPR016555 GO:0004630|GO:0006654|GO:0048017
Bda07g01281 972 PIRSF PLD_euk 17 434 IPR016555 GO:0004630|GO:0006654|GO:0048017
Bda07g01281 972 PIRSF PLD_euk 759 971 IPR016555 GO:0004630|GO:0006654|GO:0048017
Bda07g01281 972 SMART PH_update 217 345 IPR001849 -
Bda07g01281 972 CDD PLDc_vPLD1_2_yPLD_like_2 602 812 - -
Bda07g01281 972 Gene3D - 217 344 IPR011993 -
Bda07g01281 972 SUPERFAMILY Phospholipase D/nuclease 582 818 - -
Bda07g01281 972 SMART pld_4 768 795 IPR001736 GO:0003824
Bda07g01281 972 PANTHER PHOSPHOLIPASE D 25 433 IPR015679 -
Bda07g01281 972 PANTHER PHOSPHOLIPASE D 433 969 IPR015679 -
Bda07g01281 972 CDD PH_PLD 194 341 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01281 Bda-Chr7:15658298 Bda08g00300 Bda-Chr8:3135500 3.65E-156 dispersed
Bda07g01281 Bda-Chr7:15658298 Bda04g00828 Bda-Chr4:58155369 2.18E-22 transposed
Bda07g01281 Bda-Chr7:15658298 Bda06g00065 Bda-Chr6:656717 5.98E-22 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01281 K01115 - jre:109021076 674.47