Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01283 ATGGGGCATTTGTCCTCCATGTTCAATGGATTGGCAAAGTCGTTTTCGGTGAGGAAGGGGATAAGTAAAGAAAATGTTGGTGCACAAGAAGCTGCAGAAGCCATGGAAAAGGATGCTAAGAAAAAGGATTTAATTTTGCGTACTTCCACCAGTGTAAACTTTGATGGATCGAGCAATTTCGCCTCTGTTTGTTCTAAGAAGGGCGAGAAAGGAGTGAATCAAGATTGTTGCATAGTTTGGGAGGAATTTGGATGCCAAGATGATATGATCTTTTGTGGCATTTTTGATGGTCATGGGCCATGGGGCCATTTTGTTGCAAAAAAAGCTAGAGAATCAATGCCATCATCTCTTCTGTGCCATTGGCAAGAAGCTCTATCTCAATATTCCTACGAATCGGACATGGACTCGGACTTTGATAAAAACCACCAACGCTTTGAGATATGGAAAAATTCTTACATAAAAACTTGTGCAGCTATTGATCAGCAGCTTCAGCAGCATCGGAAAATTGACTCGTATTACAGCGGAACGACAGCCTTGTCAATTGTAAGACAGGGAGAGTTAATCGTCATAGCTAATGTCGGAGACTCTCGAGCTGTATTAGCGACCTCTTTAGACGATGGAAGCTTAGTACCAGTTCAACTTTCTGTCGATTTCAAGCCCAATTTGCCTCAGGAGGCAGAGCGGATAACTCAGTGCAACGGCCGAGTGTTCTGCTTAGACGACGAGCCAGGAGTTCACAGGGTGTGGCTGCCGTACGAGCAATCCCCTGGACTGGCCATGTCACGAGCATTTGGCGATTACTGTGTCAAAGGCTTCGGTCTTATATCGGTTCCGGAAGTGACTCAAAGAATTATAACAAATGAAGATCATTTTGTCATCCTAGCGACTGATGGGGTATGGGATGTTATTTCAAATCAAGAAGCTGTGCTGATTGTATCTTCGGCCCCGGAACGAGCAAAATCAGCCAAGCGCCTAGCGAAGGCAGCGGCTCGGGCTTGGAAACGTAAACGCCCCGGGATTGCTAAGGACGACATATCGGCAATATGTCTCTTCTTTAGCTCTTCTCCTTAG 1071 45.38 MGHLSSMFNGLAKSFSVRKGISKENVGAQEAAEAMEKDAKKKDLILRTSTSVNFDGSSNFASVCSKKGEKGVNQDCCIVWEEFGCQDDMIFCGIFDGHGPWGHFVAKKARESMPSSLLCHWQEALSQYSYESDMDSDFDKNHQRFEIWKNSYIKTCAAIDQQLQQHRKIDSYYSGTTALSIVRQGELIVIANVGDSRAVLATSLDDGSLVPVQLSVDFKPNLPQEAERITQCNGRVFCLDDEPGVHRVWLPYEQSPGLAMSRAFGDYCVKGFGLISVPEVTQRIITNEDHFVILATDGVWDVISNQEAVLIVSSAPERAKSAKRLAKAAARAWKRKRPGIAKDDISAICLFFSSSP 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15674694 15676903 + Bda026489.1 Bda07g01283 10173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01283 356 CDD PP2Cc 59 352 IPR001932 -
Bda07g01283 356 SUPERFAMILY PP2C-like 48 353 IPR036457 -
Bda07g01283 356 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Bda07g01283 356 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 356 - -
Bda07g01283 356 Pfam Protein phosphatase 2C 75 331 IPR001932 -
Bda07g01283 356 Gene3D - 48 354 IPR036457 -
Bda07g01283 356 PANTHER ALPHABET, ISOFORM E-RELATED 1 356 - -
Bda07g01283 356 SMART PP2C_4 49 350 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01283 Bda-Chr7:15674694 Bda12g00309 Bda-Chr12:3395056 7.75E-111 dispersed
Bda12g00426 Bda-Chr12:5185339 Bda07g01283 Bda-Chr7:15674694 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01283 - - tcc:18600517 544.658