Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01285 ATGTCTACTTTTACCAAGCCAGAGAATGCTTTAAAACGAGCTGAAGAGTTAATCAATGTTGGGCAAAAGCAAGATGCATTACAAGCTCTTCATGATCTCATCACCTCTAAAAAATATCGAGCATGGCAAAAGCCACTTGAAAGGATTATGTTCAAATATGTGGAGCTTTGTGTGGACATGCGGAGAGGAAGGTTTGCAAAGGATGGTTTAATTCAATACCGAATAGTGTGCCAACAAGTCAACGTTTCTTCCTTAGAGGAGGTGATCAAGCACTTTATGCATCTGTCTTCTGAGAAAGCTGAGCAGGCTCGTAGTCAGGCACAAGCTCTTGAAGAAGCTCTCGATGTTGATGACTTGGAAGCAGATAAAAGACCTGAAGATTTGATGCTTAGTTATGTCAGCGGAGAGAAGGGAAAGGATAGGTCTGATCGTGAACTTGTGACTCCATGGTTCAAATTCTTATGGGAGACTTACAGGACAGTGCTTGAAATACTACGAAACAACTCAAAATTGGAGGCACTTTATGCTATGACAGCTCATCGAGCCTTCCAGTTCTGCAAACAGTATAAAAGAGCGACAGAGTTTCGCAGACTATGTGAAATTATCCGGAATCATCTATCAAACCTTAATAAATACAGGGACCAAAGAGATCGCCCTGACTTGTCAGCACCAGAGAGCTTGCAACTTTACCTTGACACGAGATTCGAACAGCTTAAAATTGCTACTGAACTCAAACTCTGGCAGGAAGCTTTTCGTTCGGTTGAGGATATCCATGGATTGATGTGCATTGTTAAGAAAACACCAAAGTCTTCCTTGATGGTCGTATATTATGCTAAACTTACTGAAATATTTTGGATTTCGTCTAGCCATCTTTATCATGCTTATGCGTGGTTCAAGCTTTTCACTCTTCAAAAAAGCTTCAACAAAAACTTAAACCAAAAGGATCTGCAGTTGATTGCTTCATCTGTTGTTTTGGCTGCACTTTCTGTTTCACCATATGATCGCACACTTGGTGCATCACATGTGGAACTTGAGAATGAAAAAGAGCGCAACTTGCGAATGGCAAATCTTATAGGGTTCAATCTCGATCCTAAATACGACAGTAGGGAAGTGCTTTCACGGTCAAATCTTCTTTCTGAACTGGTATCTAAAGGGGTGCTGAGCTGTGCAACTCAGGAAGTAAAAGATGTTTACCATCTCTTGGAGCACGAGTTTCTTCCACTTGATCTCGCCACAAAACTGCAGCCTCTGTTAACTAAAATGTCAAAGCTTGGGGGTAAGCTTTCTTCTGCTTCATCTGTACCAGAAGTGCAATTTTCGCAATATGTCAGCGCCTTGGAGAAGCTTGCTACTTTGAGGGTGCTTCAGCAGGTGTCTCAAGTTTACCAGTCAATGAAAATTGAGAGTTTATCTAGGATGATCTCTTTCTTTGATTTCTTGGCTGTTGAGAAAATTGCTGTTGACGCTGTCAAACATAATTTTGTAGCTATGAAAGTGGATCACACAAGAGGCGTGGTGGTGTTTGGTAATGTGGGTTTTGAATCCGATGGAATTAGAGATCACTTGTCTACTTTTGCTGAACATTTAAATAAAGCAAGGGCCATGATATATCCACCTATTACGAAAGCATCAAAAACAGAACAAATGTTGTCTAGTTTGGCAGACGTTGTGGAGAAGGAACACAAAAAGCTTCTTGCTCGAAAATCTATTATTGAAAAAAGAAAAGAAGAACAGGAACGCCATCTTTTAGAAATGGAGCGCGAGGAGGAGTCAAAACGGATTAAACTACAAAAGATTACTGAAGAGGCAGAGCAAAAGAGGCTTGCATCTGAGTATGAGCAAAGAAAAAACCAAAGAATACTTAGGGAAATAGAGGAACGAGAACTTGAAGAAGCTCAGGCTTTACTTCAGGAAGCTGGAAAGCGTGTTGGTAAGAAGAAGGGAAAGAAGCCAATTTTAGAAGGGGAAAAGGTGACAAAGCAAACCTTAATGGAACTAGCACTGAGTGAGCAGCTCAGGGAAAGGCAGGAAATGGAGAAGAAATTACAAAAATTGGCAAAAACAATGGATTATTTAGAGAGAGCAAAAAGAGAAGAAGCAGCACCTTTGATTGAAGCTGCATTTCAGCAACGTATAGTGGAGGAGAGAGAGCTCCATGAACGGGAGCAGCAGCTTGAGGTTGAATTGAGCAAACAACGACATGAAGGGGACCTCAAGGAGAAGAATCGTCTGATTCGGATGGTGGACAATAAGAAAATATTCCAGGAGAAAGTTATGAGTCGCAGGAAAGAAGAGTTTGACAGACGAAGAGCTGAAAGAGATGAAGAAATTCAGCAAATAATTCAATTAAAGAGACAGGAGAGGGATTCTAAAAGAAAGAAAATATTCTATGTGAGACGTGAAGAAGAGAGGCTCAGAAAACTGCATGAAGAGGAGGAAGCTCAAAAGCGTGAACGTATGTTAAGTATATTACATGATTAA 2481 40.67 MSTFTKPENALKRAEELINVGQKQDALQALHDLITSKKYRAWQKPLERIMFKYVELCVDMRRGRFAKDGLIQYRIVCQQVNVSSLEEVIKHFMHLSSEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRATEFRRLCEIIRNHLSNLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKIATELKLWQEAFRSVEDIHGLMCIVKKTPKSSLMVVYYAKLTEIFWISSSHLYHAYAWFKLFTLQKSFNKNLNQKDLQLIASSVVLAALSVSPYDRTLGASHVELENEKERNLRMANLIGFNLDPKYDSREVLSRSNLLSELVSKGVLSCATQEVKDVYHLLEHEFLPLDLATKLQPLLTKMSKLGGKLSSASSVPEVQFSQYVSALEKLATLRVLQQVSQVYQSMKIESLSRMISFFDFLAVEKIAVDAVKHNFVAMKVDHTRGVVVFGNVGFESDGIRDHLSTFAEHLNKARAMIYPPITKASKTEQMLSSLADVVEKEHKKLLARKSIIEKRKEEQERHLLEMEREEESKRIKLQKITEEAEQKRLASEYEQRKNQRILREIEERELEEAQALLQEAGKRVGKKKGKKPILEGEKVTKQTLMELALSEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAFQQRIVEERELHEREQQLEVELSKQRHEGDLKEKNRLIRMVDNKKIFQEKVMSRRKEEFDRRRAERDEEIQQIIQLKRQERDSKRKKIFYVRREEERLRKLHEEEEAQKRERMLSILHD 826
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15688739 15694191 + Bda026491.1 Bda07g01285 10175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01285 826 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 826 IPR027512 GO:0005852
Bda07g01285 826 Pfam PCI domain 373 509 IPR000717 -
Bda07g01285 826 Coils Coil 615 642 - -
Bda07g01285 826 Coils Coil 798 819 - -
Bda07g01285 826 Coils Coil 668 698 - -
Bda07g01285 826 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 819 IPR027512 GO:0005852
Bda07g01285 826 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 - -
Bda07g01285 826 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 1 819 - -
Bda07g01285 826 Coils Coil 715 735 - -
Bda07g01285 826 Coils Coil 568 602 - -
Bda07g01285 826 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Bda07g01285 826 Coils Coil 93 120 - -
Bda07g01285 826 SMART PINT_4 441 532 IPR000717 -
Bda07g01285 826 Gene3D - 363 493 - -
Bda07g01285 826 Gene3D - 268 343 - -
Bda07g01285 826 Gene3D UVR domain 217 267 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01285 K03254 - vvi:100244162 1285.78