Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda07g01302 | ATGGTTTGCCGAGAAGAGCCTTTGGTACGCAAAGTCTGCGAAATGTACGACCAAATCTCAAACCTGGAGAACCTCAAACCTTGCAAAAATGTCGACATACTCTTCACCCAGCTGGTGCTGACTTGCATACAGCCAAGCCCTGTTGATGTAGCCAAACTTTGCACGAGGGTTCAGCAAGTCAGAGCCAAACTCATTCGGCTCTGCGCTGAGGCCGAGGGTCTTTTAGAAAGCCATTTCTCGACCATCTTAGCCTCTTTTAAAAACCCACTTCAAAGTCTCGACCTTTTCCCTTACTATCCCAACTACCTCAAACTTAGCCTTCTTGAGTTCAATATCCTTACAGATCATTGCGAAAATCCACCCTCAAAACTTGCTTTTATTGGGTCTGGATCACTTCCTCTCACCTCCATTGTTTTAGCCCTTAATCACCTCCCTTCCACCATTTTTCACAACTATGATATCGACCCTTCAGCCAACTCTAAGGCTTTATCTTTGATTTCATCTCATCCTGATTTGTCAAAAAGAATGTTTTTTCACACTGCTGATATAATGAACGTTACCAATGCTTTGAAAGAGTATCAAGTCCTGTTTTTAGCTGCTTTAGTTGGTATGAACAAGGAAGAGAAAGCTAAAGTTGTAGACCATTTGTGCAAGTTTATGGCTCCTGGAGCTTATCTGATGGTTCGAAGCGCCCATGGAGCAAGGGCTTTTCTGTACCCAGTTGTTGAATTTGCCGATCTTCGCGGGTTTGAGATCCTGTCTGTGTTTCACCCAACTGACGAGATTATAAATTCGGTCATTATTGCGAGGAAAAAGACGATATCTGTTGATCGATTTGATGAGCAAGGGAACAAATTCCATGGTAATGCCTTGTAA | 876 | 43.04 | MVCREEPLVRKVCEMYDQISNLENLKPCKNVDILFTQLVLTCIQPSPVDVAKLCTRVQQVRAKLIRLCAEAEGLLESHFSTILASFKNPLQSLDLFPYYPNYLKLSLLEFNILTDHCENPPSKLAFIGSGSLPLTSIVLALNHLPSTIFHNYDIDPSANSKALSLISSHPDLSKRMFFHTADIMNVTNALKEYQVLFLAALVGMNKEEKAKVVDHLCKFMAPGAYLMVRSAHGARAFLYPVVEFADLRGFEILSVFHPTDEIINSVIIARKKTISVDRFDEQGNKFHGNAL | 291 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 15861505 | 15862380 | + | Bda026506.1 | Bda07g01302 | 10192 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda07g01302 | 291 | Pfam | Nicotianamine synthase protein | 5 | 273 | IPR004298 | GO:0030410|GO:0030418 | |
| Bda07g01302 | 291 | PANTHER | NICOTIANAMINE SYNTHASE 3 | 1 | 281 | IPR004298 | GO:0030410|GO:0030418 | |
| Bda07g01302 | 291 | Gene3D | Vaccinia Virus protein VP39 | 7 | 273 | IPR029063 | - | |
| Bda07g01302 | 291 | ProSiteProfiles | Nicotianamine synthase (NAS)-like family profile. | 1 | 276 | IPR004298 | GO:0030410|GO:0030418 | |
| Bda07g01302 | 291 | PANTHER | SYNTHASE, PUTATIVE-RELATED | 1 | 281 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda07g01302 | Bda-Chr7:15861505 | Bda12g00443 | Bda-Chr12:5441861 | 2.67E-175 | dispersed | |
| Bda07g01301 | Bda-Chr7:15857419 | Bda07g01302 | Bda-Chr7:15861505 | 8.77E-136 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda07g01302 | K05953 | - | tcc:18600574 | 428.713 |