Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01309 CATCGTGAAATTTCGTGGGGTGTGGGTATGGCCAGTGGTGGGGGTGGAGCAGAAGCGCAGTATGTGAAGGCTAAGACGTCTGTCTGGTGGGACATCGAGAATTGTCAGGTACCCAAGGGCTGCGACGCCCATAGCATTGCTCAGAATGTTAGCTCTGCCCTCTCTAACCTCAATTATTGCGGTCCTCTCTCTATCTCTGCCTATGGGGATACCACTCGCATCCCTCACTCCATCCAGCAAGCGCTTTCCTCCACCGGAGTATCCCTCAACCACGTCCCTTCCGGTGTTAAAGATGCAAGTGACAAGAAGATTCTGGTAGACATGCTACTTTGGGCTGTGGACAATCCTTCTCCTGCTAACTATCTGTTGATATCTGGGGACCGAGATTTCTCTAATGCTCTTCATCAGTTGGGCATGAGAAGATACAATATCCTTCTAGCACAACCACTTAAAGCATCTGTACCGCTCCTCAAAGCTGCCAAGATCGTATGGCTATGGACCAGTCTTGTCGCCGGAGGACCACCTCAAACAAACACTGAACTACAACAACTTGTTAATAATAGCTCTGCCTCAACTTCTGATACCTCGCCCAGTCCACCCTGTCCAGTCACCATTGCCTCTCAAATTCATCAAGCAATGGGTGCCCCCCATTTTCAAGACCTTAAAACAGGAAAACAATCTCCCAAATTTAAGGGAAAAGTACCTAGGAGAAACTTTAGTCAACCAATTGTATTAAAACCAAAAAAATTTCCGATCGAGAGTCCAGATGATCAAGGCACTGTCAATCCTTGCCAACTTGTTAATTCATGTTCGAATGCCCCCTCTATGAGTCGGCCTCCAACACATTTTCCGCCATTCAATCCTGATCTTTCGAGGAGCAACATCAATAATCCTCAGAGCAGCTATCAGAATTCATCCCCCCATTCTATAAGGCCTGACATCCATTCATTACAACCCGCAAACTCACCTTCAAATATGTACCACCCATCTAATCTTCACACCAATGTTTCTCCAATCCCTCCTAGACCTGGCTTCTCATCAGGTTTTGCTACAAGTGTGCCTGATTTTAGTAGTTTGAATATTTCTGGTTCTTTTAGCAGCACCCATCATGTCCATGGTGATCGACCTCAGAATGGAGAACAATTGCACAATTTTACGAACAACTCTCCCAATTCTATGAACTTCAGTGAATCAAAGAAGGGGATCCCAATCCAGGATTCATATTCTGAAGACAATTGGAACGACAATTGGAACACTCAATGTATGGAGTTTTCATCCACATCAGCTGAAGCCGCAAGTTCATCTAGCTCTAACAATATCCAATGGGGATCTGTAGGCTGTCCAAAACCTTCCGAGAATGTACAAGGGCATATAGGAATTATCTTATGTGCCTTGAACACCCTGAAAAACGAAAAGATAATGCCAACTGAAGCAAACATAGCTGATTGCATAAGGTTTGGAGAACCCAAACAACATCAGATTGATATAAAGAAAGCCCTGACAAGTGCTATTGAGCATCAAATGGTTGTGATGCAGAATCTAGGTGCACTGCAGTTGTATATCGGCAAGAACGGCGTACTATGGAAATGTGTAAACCCATTGGGTGGAAACACTAATCAGTTTTCCACAGATATATGGAATAGAATCCAACAATTTTTAACATCATCTGCTGGGCGAACTGCTATAATGGTTTCACAGTGCAGTAGGTATGAAGCAGGCACAATATTGAAGAGCATGTGCTTGAAAGAGGTTAGTTTGGGCAAAATACTTCAGATTCTGAATATGGTAATAACTGTGAAGAAGTGGATTGTCCATCATCACTCGGGATGGCAACCACTAAAAATTGTTCTTACTTAG 1857 43.94 HREISWGVGMASGGGGAEAQYVKAKTSVWWDIENCQVPKGCDAHSIAQNVSSALSNLNYCGPLSISAYGDTTRIPHSIQQALSSTGVSLNHVPSGVKDASDKKILVDMLLWAVDNPSPANYLLISGDRDFSNALHQLGMRRYNILLAQPLKASVPLLKAAKIVWLWTSLVAGGPPQTNTELQQLVNNSSASTSDTSPSPPCPVTIASQIHQAMGAPHFQDLKTGKQSPKFKGKVPRRNFSQPIVLKPKKFPIESPDDQGTVNPCQLVNSCSNAPSMSRPPTHFPPFNPDLSRSNINNPQSSYQNSSPHSIRPDIHSLQPANSPSNMYHPSNLHTNVSPIPPRPGFSSGFATSVPDFSSLNISGSFSSTHHVHGDRPQNGEQLHNFTNNSPNSMNFSESKKGIPIQDSYSEDNWNDNWNTQCMEFSSTSAEAASSSSSNNIQWGSVGCPKPSENVQGHIGIILCALNTLKNEKIMPTEANIADCIRFGEPKQHQIDIKKALTSAIEHQMVVMQNLGALQLYIGKNGVLWKCVNPLGGNTNQFSTDIWNRIQQFLTSSAGRTAIMVSQCSRYEAGTILKSMCLKEVSLGKILQILNMVITVKKWIVHHHSGWQPLKIVLT 618
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15906323 15908579 + Bda026513.1 Bda07g01309 10199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01309 618 MobiDBLite consensus disorder prediction 272 339 - -
Bda07g01309 618 Pfam NYN domain 25 160 IPR021139 GO:0004540
Bda07g01309 618 Pfam OST-HTH Associated domain 568 616 IPR025677 -
Bda07g01309 618 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 11 610 - -
Bda07g01309 618 PANTHER LIMKAIN B LKAP 11 610 IPR024768 GO:0005777|GO:0010468|GO:1903231
Bda07g01309 618 Gene3D - 18 168 - -
Bda07g01309 618 MobiDBLite consensus disorder prediction 287 339 - -
Bda07g01309 618 MobiDBLite consensus disorder prediction 219 238 - -
Bda07g01309 618 MobiDBLite consensus disorder prediction 366 407 - -
Bda07g01309 618 MobiDBLite consensus disorder prediction 379 407 - -
Bda07g01309 618 CDD PIN_limkain_b1_N_like 25 149 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g01069 Bda-Chr6:38002751 Bda07g01309 Bda-Chr7:15906323 6.02E-12 dispersed
Bda07g01309 Bda-Chr7:15906323 Bda11g01353 Bda-Chr11:15418332 3.64E-39 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01309 - - rcu:8274957 610.142