Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01320 ATGTTGGAAGAGAGTATACCATCCGAACTTGGACAGCTTCAGAAGCTTGAGGTGTTTGATGGTTCGAGGAACAGCCTCAGTGGTGCAATACCCCATGAGCTGGGAAATTGCTTTGAATTGTCTGTTCTTGTACTTTCCAATCTGTTTGACCCTCTACCTCCGATCAAAAACGCTGATGGGAACCCTCCCTTAGGGGAAATGAGCACTGATGACTTTAATTTCTTTCAAGGCGCCATGCCAATGGAAATTGCAAGGCTTCCAAAACTAAGGATTCTGTGGGCACCAAGGGCCAGTCTGGAGGGTAAGTTTCCAAGCAATTGGGGTAGATGCGAAAATTTACAGATGATAAGCTTGGCTCAGAATCTATTCTCTGGAGAATTTCCCAGAAGCCTTAGACTTTGCAAGAAGCTACAATTTCTTGACTTAAGCAGTAACAAGCTTTTTGGTGAACTTGACGAGGAGCTTTCTGTACCTTGCATGGCTGTGTTTGATATCAGTGACAACCATTTGTCAGGTTTGATTCCTAAATTTGGTAAGATTTCATGCCTTCCCGTTACTGCTTATGAACCGGACAATCCATCATCTGTGTATATTTCATTTTTTGAGACTAAAGTTCGAGAAGCCGTCACTTATCATTTTGTTAAACATGATGATTTTGTGGTTTTTCATAACTTTGGGCACAATAATTTCACGGGTGGTTTCCAGTCTATGCCTATTGCACCCGAAAGATTAGGAGTACGAACTGTTTATGCATATCTTGCTGGAGAAAACAAGCTTACTGGACCTTTTCCTGGCAACTTATTTGAAAATTGTCCAGGATTAGGGGCATTGATTGTTAATGTTAGCTATAACAGAATATCTGGTCAGATTCCCAGTCATATTGGTCAAATGTGCAGTTCATTAAAATATTTTGATGCATCTGGTAATCAAATTAGTGGACCCATCAGCAGTAGTTTTGGCGATTTGGTGTCTCTAGATGATCTCAACCTGAGCCGGAACCTGTTAGAAGGTCACATTCCGGCCAGTCTTGGTCAGATAAAATATCTGAGATATCTTTCTTTGGCTAACAATCGCTTGAATGGCTCCATTCCTTCCAGCTTGGGACGGTTGCAGTCCTTGGAACTGCTCGATCTTTCTTCAAATTATATCAGTGATGTTATTCCCAAAGATTTAGTTAACTTGAGGAATCTGACTGTTCTTCTGTTCAATAATAATAATTTATCAGGGCCGATTCCTTCCGAGCTGGCACATCTGACCTCACTCTCTGTTTTCAATGTATCATTCAATAATTTGTCCGGGTCCCTGCCTTTGAACAACAACTTCATTAGATGTAATTCTGCTCTTGGGAATCCTGGTATTGTTTCGTGTCCTATGTCTAATCTATTGGTGCCATCATCCGATACGCAAGGAAGAGTTGGAGTTGCAAGTAATTATGAAGCTTCACCTCCTGGGACTGTAACCCAGACAAGTGGAGGTAATGGCTTTAATTCAATTGAGATTGCATCTATAACTTCTGCGTCAGCCATTGTCTCGGTTCTTCTAGCTTTGATCGTCCTTTTCATTTATACCCGAAAGTGGAATCCCAAATCTAAAGTCCTTGCTGCCACTAGAAAGGAAGTAACTGTTTTCACAGACATCGGGATTCCTCTGAACTTTGACAACGTCGTGAGAGCGACAGGAAACTTCAATGCGAGTAATTGCATTGGTAATGGAGGTTTTGGGGCAACTTACAAAGCAGAGATCTCGGCCGGAGTTTTAGTGGCCATAAAACGACTTTCCGTTGGACGATTTCAGGGAGTTCAACAGTTCCATGCTGAAGTCAAGACTCTTGGGAGGCTGCGCCATCCTAATCTTGTCACTTTAATTGGATATCATGCTAGCGAGACAGAAATGTTTCTGATATACAATTACTTGCCGGGTGGTAATTTGGAGAAATTTATTCACGAGAGATCGACAAGGGCCGTTGATTGGAGAATTCTACACAAAATTGCTCTGGACATAGCCCGTGCACTTGCCTACCTTCACGATCAATGCGTGCCACGGGTCCTTCATCGAGATGTCAAGCCAAGCAATATCTTATTAGATGATGATCTCAATGCTTATCTATCTGATTTTGGATTGGCCCGTCTTTTAGGTACTTCTGAAACACATGCCACTACAGGTGTGGCCGGAACATTTGGGTACGTTGCCCCGGAATATGCTATGACTTGCCGTGTTTCGGACAAGGCCGATGTGTATAGTTATGGGGTGGTACTACTAGAATTGCTCTCTGACAAAAAAGCTTTGGACCCTTCGTTTTCCTCTTACGGAAATGGCTTCAACATAGTCGCATGGGCGTGTATGCTTTTAAGACAAGGCCGTGCAAAGGAGTTCTTCACCGCCGGACTATGGGACGTGGGCCCACACGATGATTTGGTAGAAGTACTACACTTGGCTGTGGTTTGTACGGTCGATTCTCTCTCTACGAGGCCAACGATGAAGCAAGTTGTCCGACGGCTCAAGCAACTTCAACCACCCTCGTGTTAG 2526 43.27 MLEESIPSELGQLQKLEVFDGSRNSLSGAIPHELGNCFELSVLVLSNLFDPLPPIKNADGNPPLGEMSTDDFNFFQGAMPMEIARLPKLRILWAPRASLEGKFPSNWGRCENLQMISLAQNLFSGEFPRSLRLCKKLQFLDLSSNKLFGELDEELSVPCMAVFDISDNHLSGLIPKFGKISCLPVTAYEPDNPSSVYISFFETKVREAVTYHFVKHDDFVVFHNFGHNNFTGGFQSMPIAPERLGVRTVYAYLAGENKLTGPFPGNLFENCPGLGALIVNVSYNRISGQIPSHIGQMCSSLKYFDASGNQISGPISSSFGDLVSLDDLNLSRNLLEGHIPASLGQIKYLRYLSLANNRLNGSIPSSLGRLQSLELLDLSSNYISDVIPKDLVNLRNLTVLLFNNNNLSGPIPSELAHLTSLSVFNVSFNNLSGSLPLNNNFIRCNSALGNPGIVSCPMSNLLVPSSDTQGRVGVASNYEASPPGTVTQTSGGNGFNSIEIASITSASAIVSVLLALIVLFIYTRKWNPKSKVLAATRKEVTVFTDIGIPLNFDNVVRATGNFNASNCIGNGGFGATYKAEISAGVLVAIKRLSVGRFQGVQQFHAEVKTLGRLRHPNLVTLIGYHASETEMFLIYNYLPGGNLEKFIHERSTRAVDWRILHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDLNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWACMLLRQGRAKEFFTAGLWDVGPHDDLVEVLHLAVVCTVDSLSTRPTMKQVVRRLKQLQPPSC 841
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16013117 16015642 - Bda026525.1 Bda07g01320 10210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01320 841 Gene3D Ribonuclease Inhibitor 1 66 IPR032675 -
Bda07g01320 841 CDD STKc_IRAK 568 836 - -
Bda07g01320 841 Gene3D Phosphorylase Kinase; domain 1 524 637 - -
Bda07g01320 841 Gene3D Ribonuclease Inhibitor 67 195 IPR032675 -
Bda07g01320 841 Gene3D Transferase(Phosphotransferase) domain 1 638 838 - -
Bda07g01320 841 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1 840 - -
Bda07g01320 841 ProSitePatterns Protein kinases ATP-binding region signature. 568 590 IPR017441 GO:0005524
Bda07g01320 841 SUPERFAMILY Protein kinase-like (PK-like) 547 833 IPR011009 -
Bda07g01320 841 Pfam Protein kinase domain 565 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g01320 841 ProSiteProfiles Protein kinase domain profile. 562 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g01320 841 Gene3D Ribonuclease Inhibitor 219 454 IPR032675 -
Bda07g01320 841 SUPERFAMILY L domain-like 257 457 - -
Bda07g01320 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 682 694 IPR008271 GO:0004672|GO:0006468
Bda07g01320 841 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 1 840 - -
Bda07g01320 841 SUPERFAMILY L domain-like 3 183 - -
Bda07g01320 841 SMART serkin_6 562 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda07g01320 841 ProSiteProfiles Leucine-rich repeat profile. 372 395 IPR001611 GO:0005515
Bda07g01320 841 Pfam Leucine rich repeat 348 407 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02127 Bda-Chr1:57274590 Bda07g01320 Bda-Chr7:16013117 2.86E-09 dispersed
Bda07g01320 Bda-Chr7:16013117 Bda05g00016 Bda-Chr5:1222436 4.93E-17 dispersed
Bda07g01320 Bda-Chr7:16013117 Bda01g00642 Bda-Chr1:33452813 2.51E-13 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69730 PF00069 Pkinase 1.00E-43 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01320 - - zju:107415929 1216.45