Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01333 ATGGTAAGAAATAACCCGCAAGATGATATTAGAGTGAAAAAACGTCGCGTTTGTGGGCATCAATTTACAACTAGGACTAGGACCCTCCTTTCCTTCTTCATTTACTACACGACATCGTCCTTACCACTCTCTTCCTCCGTTCTTTCCTCCTTAAAAACCCTCTCTCTTCTCCTTCCTCTTCGACACACTTCTTCTCTCTCTACACGCCATGTCTTCTTTTCGCAGCTTCGACTTCTTCGTTCGAAGGTGGTTTTCTTGTTTCTGTGTTTATTTTCAGTTGATAATGCTTCTAATGTTTTTTCTGTTGTTTTGAGTCGTTGCAGTAGTTGGAGAGGGTTTTATCGTCGCCGGAGCTCCACTGTCGATGACGCAGATAGCAACAGCGACGATGATCCGGTGTCCGGCCCCACAGAATGCTACGCCTGCACACAGGTTGGCGTTCCCGCGTTTCACTCCACCAGCTGTGACCGAGCGAACCAGCCGGAATGGGAGGCCTCCGCCGGGTCCTCCCTCGTACCCATCAAAAACAAGGAGCAGAGTCGAGAGACAAGAACCCAGAGACCATCGGGCTTTTTCGGACCGTTACGGGACCCGAGAAGTAAGCAGGTCCGGAGATGGAACAGAACGATCTTATTGGCTCGTGGAATGGCCTTAGCCGTCGATCCACTCTTCTTCTACGCGCTGTCTATCGGACGAGGAGGAACTCCGTGCCTGTTCATGGACGGTGGATTAGCCGCAATAGTGACCGTATCTAGTAGTGTTGCAGGTGGTTGCTGGTACGTCCTGGCGATACAGCGAGTGGCTTCGTGTCTGCAGCAGCACTGCCGCAGACATGGCTGCAATCTCTCCTTGTCTTGCTCCGATGAGATTTGTTATCAATCTCTTCTACCTGCCAATTCCGTTGGCAATTTTTGCGGCGGAAATTCGACGGCGACTGCTGTCAGAAAGCCTTTCTGCTTGGACGAGCATGGATCCTTCCGCTACGGCATATATCAGTGGGCTCTTCCTGTTATTTCCAGTAATTCTGTTGTTGTTAAGGTGCTTTATCCCATATTTTGGGGCTTAATGACTCTCAGCACCTTTGGTAATGATCTCGAGCCTACAAGTAATTGGCTGGAAGTGATATTCAGTATTTGCCTTGTGTTGAGTGGACTAATGTTGTTCACTCTGTTGATCGGGAATATCCAGGTATTTTTGCACTCTGTGATGGCGAAAAAGAGAAAAATGCAGCTGAGAAGTCGAGACATGGAATGGTGGATGCGAAGAAGACAGTTGCCGTTTCGTTTGAGACAAAGGGTTCGTCATTACGAACACCAAAGTTGGACGGTTCTAGGAGGAGAAGACGAGATGTCACTGATCAAGGACTTACCCGATGGCCTTCGTCGAGACATTAAACGATTTCTTTGCCTGGACCTCATCAAACATGTACCTCTATTCCATGACATGGACGATCTGATTCTCGATAACATCTGTGATAGGGTTACCCCACTCGTCTTCTCCAAAGATGAAAAGATTATAAGAGAAGGAGATCCAGTAGCAAGAATGCTATTCATCATTCGTGGGCGAATCAAACGCTGCCAAAGCCTCAGCAAGGGAGTGATAGCCACAAGCATGCTTGACCAGGGAGGATTCTTTGGTGACGAACTCTTATCCTGGTGCCTCCGTCGCCCTTTCATTGATCGGCTTCCAGCCTCATCAGCAACATTTGTGTGTGTCGAACCAACAGAAGCATTTGGCCTCGATGCAGCCCATCTTCGATTCATCACTGACCATTTTCGTTATAAGTTTGCCAACGAGAGGCTGAAAAGAACTGCAAGATACTACTCTTCCAATTGGAGATCATGGGCTGCAGTGATTATACAATTTGCATATCGTCGTCACAAGTCGAATATTCAAGGTCCGGAGATAATTGTGCCGGAGATTGAAGATTCTGACCGTCGGCTTTTGCAGTATGCTGCCATGTTCATGTCATTTAGGCCACATGACCATCTTGAATAA 1998 47.8 MVRNNPQDDIRVKKRRVCGHQFTTRTRTLLSFFIYYTTSSLPLSSSVLSSLKTLSLLLPLRHTSSLSTRHVFFSQLRLLRSKVVFLFLCLFSVDNASNVFSVVLSRCSSWRGFYRRRSSTVDDADSNSDDDPVSGPTECYACTQVGVPAFHSTSCDRANQPEWEASAGSSLVPIKNKEQSRETRTQRPSGFFGPLRDPRSKQVRRWNRTILLARGMALAVDPLFFYALSIGRGGTPCLFMDGGLAAIVTVSSSVAGGCWYVLAIQRVASCLQQHCRRHGCNLSLSCSDEICYQSLLPANSVGNFCGGNSTATAVRKPFCLDEHGSFRYGIYQWALPVISSNSVVVKVLYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICLVLSGLMLFTLLIGNIQVFLHSVMAKKRKMQLRSRDMEWWMRRRQLPFRLRQRVRHYEHQSWTVLGGEDEMSLIKDLPDGLRRDIKRFLCLDLIKHVPLFHDMDDLILDNICDRVTPLVFSKDEKIIREGDPVARMLFIIRGRIKRCQSLSKGVIATSMLDQGGFFGDELLSWCLRRPFIDRLPASSATFVCVEPTEAFGLDAAHLRFITDHFRYKFANERLKRTARYYSSNWRSWAAVIIQFAYRRHKSNIQGPEIIVPEIEDSDRRLLQYAAMFMSFRPHDHLE 665
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16097327 16100995 + Bda026539.1 Bda07g01333 10223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01333 665 SUPERFAMILY Voltage-gated potassium channels 198 399 - -
Bda07g01333 665 Gene3D Jelly Rolls 476 594 IPR014710 -
Bda07g01333 665 CDD CAP_ED 478 588 IPR000595 -
Bda07g01333 665 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 124 250 - -
Bda07g01333 665 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 251 665 - -
Bda07g01333 665 ProSiteProfiles cAMP/cGMP binding motif profile. 478 557 IPR000595 -
Bda07g01333 665 MobiDBLite consensus disorder prediction 166 196 - -
Bda07g01333 665 Gene3D Helix hairpin bin 404 469 - -
Bda07g01333 665 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 124 250 - -
Bda07g01333 665 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 251 665 - -
Bda07g01333 665 SUPERFAMILY cAMP-binding domain-like 405 592 IPR018490 -
Bda07g01333 665 SMART cnmp_10 478 604 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00753 Bda-Chr5:56003081 Bda07g01333 Bda-Chr7:16097327 5.71E-09 dispersed
Bda07g01333 Bda-Chr7:16097327 Bda12g00522 Bda-Chr12:7998729 4.90E-72 dispersed
Bda07g01333 Bda-Chr7:16097327 Bda15g00779 Bda-Chr15:11637413 4.17E-78 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01333 K05391 - jre:108987412 687.952