Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda07g01353 | ATGGAAATGGCTGTGACGAATAGTGCAACTAAGTCGCCGGAGGGCGAGCCAGATCGAACGGCGACCGAGGTTTTACCGATTAAGGCTTTACCCTTTAGTAATGGTGTTTTGAAGAGGCAGAGTCCTCTGAGTCATCATCATCGTCACCACCTAAGCTCTTCCGCTAACTCCGCCGTTGTTTCCTACAAAGAATGTCTGAAAAACCACGCGGCTAGCTTAGGAGCTCACGCTTTTGATGGGTGTGGAGAATTCATGCCTTCTCCTTCTGCAACTTCTTCCGATCCCACTTCTTTAAAATGCGCCGCCTGCGGATGTCACCGGAACTTTCACCGCCGGGAGCCCGACAGTTTTCCAACCCTTGCCACGCATGTAATCGAGTACCAGCCACACCACCGCCACCACCCGCCGCAGCCAATTAGTCGGAGTCCGAATTCTGCATCGCCTCCACCGATCTCCTCCTCCTACTACCCTTCAGCTCCCCACATGCTTCTGGCTCTATCGGCAGGGCTGTCTACTCCTCCGGAAAGTGCACCGGCGGCTAAACGGTGTTCAAACGGGAGGAAGCGATTCAGAACCAGATTCACTCCGGACCAGAAAGAGAAAATGCATCAGTTTGCAGAAAGTATGGGATGGAGGATGCAGAAGAGAGATGAAGGAATGGTTCAAGAGTTTTGCAATGAGATTGGTATAGATAAAGGAGTTTTGAAAGTATGGATGCACAATAACAAAAACTCATCTTCGAAGAAGGATGTTAATGGCGGAACGAATATTCCGGAACTCCACAACAGCAACATCGGCGGGCATATAAATCTCTACGATGATGATGAACGGGTACATGCCGCCATTAATGCCTCTTCTTCTTCTTCCTGA | 870 | 50.0 | MEMAVTNSATKSPEGEPDRTATEVLPIKALPFSNGVLKRQSPLSHHHRHHLSSSANSAVVSYKECLKNHAASLGAHAFDGCGEFMPSPSATSSDPTSLKCAACGCHRNFHRREPDSFPTLATHVIEYQPHHRHHPPQPISRSPNSASPPPISSSYYPSAPHMLLALSAGLSTPPESAPAAKRCSNGRKRFRTRFTPDQKEKMHQFAESMGWRMQKRDEGMVQEFCNEIGIDKGVLKVWMHNNKNSSSKKDVNGGTNIPELHNSNIGGHINLYDDDERVHAAINASSSSS | 289 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 16358501 | 16359370 | + | Bda026553.1 | Bda07g01353 | 10243 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda07g01353 | 289 | TIGRFAM | ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain | 62 | 113 | IPR006456 | - | |
Bda07g01353 | 289 | PANTHER | HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN | 5 | 265 | - | - | |
Bda07g01353 | 289 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 5 | 265 | - | - | |
Bda07g01353 | 289 | MobiDBLite | consensus disorder prediction | 129 | 154 | - | - | |
Bda07g01353 | 289 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Bda07g01353 | 289 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 62 | 113 | IPR006456 | - | |
Bda07g01353 | 289 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Bda07g01353 | 289 | SUPERFAMILY | Homeodomain-like | 182 | 248 | IPR009057 | - | |
Bda07g01353 | 289 | Pfam | ZF-HD protein dimerisation region | 60 | 114 | IPR006456 | - | |
Bda07g01353 | 289 | Gene3D | - | 174 | 249 | - | - | |
Bda07g01353 | 289 | TIGRFAM | homeo_ZF_HD: homeobox domain, ZF-HD class | 187 | 244 | IPR006455 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda07g01353 | Bda12g00161 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g01353 | Bda-Chr7:16358501 | Bda11g01865 | Bda-Chr11:53736302 | 2.53E-52 | dispersed | |
Bda12g00161 | Bda-Chr12:1551063 | Bda07g01353 | Bda-Chr7:16358501 | 2.37E-116 | wgd | |
Bda13g01690 | Bda-Chr13:40265752 | Bda07g01353 | Bda-Chr7:16358501 | 1.38E-88 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16168 | PF04770 | ZF-HD_dimer | 1.30E-28 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda07g01353 | - | - | jre:108984667 | 322.398 |