Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01353 ATGGAAATGGCTGTGACGAATAGTGCAACTAAGTCGCCGGAGGGCGAGCCAGATCGAACGGCGACCGAGGTTTTACCGATTAAGGCTTTACCCTTTAGTAATGGTGTTTTGAAGAGGCAGAGTCCTCTGAGTCATCATCATCGTCACCACCTAAGCTCTTCCGCTAACTCCGCCGTTGTTTCCTACAAAGAATGTCTGAAAAACCACGCGGCTAGCTTAGGAGCTCACGCTTTTGATGGGTGTGGAGAATTCATGCCTTCTCCTTCTGCAACTTCTTCCGATCCCACTTCTTTAAAATGCGCCGCCTGCGGATGTCACCGGAACTTTCACCGCCGGGAGCCCGACAGTTTTCCAACCCTTGCCACGCATGTAATCGAGTACCAGCCACACCACCGCCACCACCCGCCGCAGCCAATTAGTCGGAGTCCGAATTCTGCATCGCCTCCACCGATCTCCTCCTCCTACTACCCTTCAGCTCCCCACATGCTTCTGGCTCTATCGGCAGGGCTGTCTACTCCTCCGGAAAGTGCACCGGCGGCTAAACGGTGTTCAAACGGGAGGAAGCGATTCAGAACCAGATTCACTCCGGACCAGAAAGAGAAAATGCATCAGTTTGCAGAAAGTATGGGATGGAGGATGCAGAAGAGAGATGAAGGAATGGTTCAAGAGTTTTGCAATGAGATTGGTATAGATAAAGGAGTTTTGAAAGTATGGATGCACAATAACAAAAACTCATCTTCGAAGAAGGATGTTAATGGCGGAACGAATATTCCGGAACTCCACAACAGCAACATCGGCGGGCATATAAATCTCTACGATGATGATGAACGGGTACATGCCGCCATTAATGCCTCTTCTTCTTCTTCCTGA 870 50.0 MEMAVTNSATKSPEGEPDRTATEVLPIKALPFSNGVLKRQSPLSHHHRHHLSSSANSAVVSYKECLKNHAASLGAHAFDGCGEFMPSPSATSSDPTSLKCAACGCHRNFHRREPDSFPTLATHVIEYQPHHRHHPPQPISRSPNSASPPPISSSYYPSAPHMLLALSAGLSTPPESAPAAKRCSNGRKRFRTRFTPDQKEKMHQFAESMGWRMQKRDEGMVQEFCNEIGIDKGVLKVWMHNNKNSSSKKDVNGGTNIPELHNSNIGGHINLYDDDERVHAAINASSSSS 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16358501 16359370 + Bda026553.1 Bda07g01353 10243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01353 289 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 62 113 IPR006456 -
Bda07g01353 289 PANTHER HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN 5 265 - -
Bda07g01353 289 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 5 265 - -
Bda07g01353 289 MobiDBLite consensus disorder prediction 129 154 - -
Bda07g01353 289 MobiDBLite consensus disorder prediction 1 15 - -
Bda07g01353 289 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 62 113 IPR006456 -
Bda07g01353 289 MobiDBLite consensus disorder prediction 1 21 - -
Bda07g01353 289 SUPERFAMILY Homeodomain-like 182 248 IPR009057 -
Bda07g01353 289 Pfam ZF-HD protein dimerisation region 60 114 IPR006456 -
Bda07g01353 289 Gene3D - 174 249 - -
Bda07g01353 289 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 187 244 IPR006455 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g01353 Bda12g00161 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01353 Bda-Chr7:16358501 Bda11g01865 Bda-Chr11:53736302 2.53E-52 dispersed
Bda12g00161 Bda-Chr12:1551063 Bda07g01353 Bda-Chr7:16358501 2.37E-116 wgd
Bda13g01690 Bda-Chr13:40265752 Bda07g01353 Bda-Chr7:16358501 1.38E-88 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16168 PF04770 ZF-HD_dimer 1.30E-28 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01353 - - jre:108984667 322.398