Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda07g01364 | TCTTCTTTCCAGGTGACACAGCACAAGATATCAGTCTGTCAGAAGACTTTGCCCCATGAAAGTGCAATCACTCATACCCAAGATTCCTCGGGTGGAGTGGGGATAAGATCAGCAAATTCTAAGGGAAAAAAGACTGCATCCACTGATTCTCCCTTAGGTCAACAAAACAATGGGTCTGCTAGTTCACTTGGCCATGGGCCAAATTCAACTGGACGAAAAGCCCAGTTAATGAATGCTAATCATTTGCTGAACTTCCATTATGATACCATTTCACGTCCTCAACCAAGAGCTCCTCCTCCAAGAAGGCAGAAATTAAAGCCATACAACAAAGCTCTATTTCTTCAGGCTAATTATAAATTTGTGGTATTAGACTCGGGTAATTATATACCTGAGTCTTTGGATCCAGATAAAATGTTGCATTGGGATGAGATTATATGTGTGAGGTATTCAACACCAACTCTCATTCGGTGTCCTATTTGTTTGGAATATCCCCTATGTCCTCAAATTACCACATGTGGGCATATTTTTTGTTTCCCATGTATTCTACGTCACTTGTTAATGGGAGAAGAGGATCATAAAGGTGACTGTTGGAAAAAGTGTCCCTTGTGTTTTGTTATGATATCTCCAAAAGATTTATATACAGTACACATTGAGACTGTTGAACCGTTTTCTGTTGGTGATACTATATCATTCACACTTTTGAACCGGCAGAAAGATTCATTTGTTATATCACATAAGCATGAACAAGACAATAAAGGCATACCATTTGATGTTAGCGATGAAATTTACGATCGCTTTTCGAAATTCACATTTACATTGGATGTGAATCTCTCAGTCAGAAAAGCAAAGTCAGATCTAGAAGAATGGTTGGTCAGAGCAGAAGCAGGTCTTGTTGATGACCTAGAGAAGCTTCCATATGTTTGTGCTGCAATCGAGCAACTAGATCAGAGGAAAATGCATTTGAATGAGCATCTGGCTGCTGTGAAGAGTCAGTCCTGTCAAAATATTGACTGTCAGGGAGAAACTCATTCAGTCAAGTCCAATGCTGATGTTGATATCTCTGGTTGTGGAACATCCTGTTTTGGAGATGCATTTTTGGCTTCTGAATTCAATGAACAAAGCACGAGGTATGATAATGCAATCACTTTGAATGGTACTTCTTTGGAGCAAACGACGGATATGGGTGAATCATTAGAAGGTCAAGAACTTGTTTTATCTTCTTCATACGAGGAAGATAGTATCGTTCATGGGATCTCAAATCAATGTAGATCAGTAGAAAAGAAAGAGTCATACAATTTCTACCAGGCGGCCGATGGGCAATACATCATTCTTCATCCACTAAATGTTAAGTGTCTTCTACACCATTATGGAAGCTACGCCATGCTTCCAGACAGGATAAGTGGAAGAATCTTACAGATGGAGACAGTGACTCAGTCGGAAGCCAGTAGGAGGCGCTATCGCTATCTAAGTCATTTTTCTTTGACAACTACCTTCCAGCTTTGCGAAGTTGATTTGAGTGAATTACTGCCTCCTGCGTCCCTCATTCCGTTTATGGACGAAATAAAGAAGCGTGAAAAGCAGAGGAAACAAATTGCTAAGAAGGAATATAAGGAGAAGATCAAGGCAGAAACTGCAGCAACATATTCTATAGTTGGTTTACATAACTTTGGACATTTCATTCATGATGATACCCCATCTTTCTCTATGGATGATTTTGAAGCTTTGGGAAGTTCTGGGGGTACATCATCCAGCCCTCCAATTGTGGCGGATAGAAAACTCTTTTCAAACGTTACAAAGCTCGGGTTTGCGGCGGGGCACGATAGTCCGCAGTTGAAGATGGACGAAACAAAAATCCTATTGTATGTAATGACAACTCTCATTGTGGTGATGATAGGGACGAGGAATGTATCGTTTGCCAATGTTATATTGAGAGCCAAGAATGACGAAACCACGGATGCACCACCCAAGAACAGTGAATTGGGGAAAAAGGGGAAGAAACCAAGTAGAGTTCTTCTATCAACGTCGGGAGGCCGGAGATACTGA | 2043 | 40.77 | SSFQVTQHKISVCQKTLPHESAITHTQDSSGGVGIRSANSKGKKTASTDSPLGQQNNGSASSLGHGPNSTGRKAQLMNANHLLNFHYDTISRPQPRAPPPRRQKLKPYNKALFLQANYKFVVLDSGNYIPESLDPDKMLHWDEIICVRYSTPTLIRCPICLEYPLCPQITTCGHIFCFPCILRHLLMGEEDHKGDCWKKCPLCFVMISPKDLYTVHIETVEPFSVGDTISFTLLNRQKDSFVISHKHEQDNKGIPFDVSDEIYDRFSKFTFTLDVNLSVRKAKSDLEEWLVRAEAGLVDDLEKLPYVCAAIEQLDQRKMHLNEHLAAVKSQSCQNIDCQGETHSVKSNADVDISGCGTSCFGDAFLASEFNEQSTRYDNAITLNGTSLEQTTDMGESLEGQELVLSSSYEEDSIVHGISNQCRSVEKKESYNFYQAADGQYIILHPLNVKCLLHHYGSYAMLPDRISGRILQMETVTQSEASRRRYRYLSHFSLTTTFQLCEVDLSELLPPASLIPFMDEIKKREKQRKQIAKKEYKEKIKAETAATYSIVGLHNFGHFIHDDTPSFSMDDFEALGSSGGTSSSPPIVADRKLFSNVTKLGFAAGHDSPQLKMDETKILLYVMTTLIVVMIGTRNVSFANVILRAKNDETTDAPPKNSELGKKGKKPSRVLLSTSGGRRY | 680 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 16487716 | 16490858 | + | Bda026564.1 | Bda07g01364 | 10254 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda07g01364 | 680 | MobiDBLite | consensus disorder prediction | 649 | 666 | - | - | |
Bda07g01364 | 680 | SUPERFAMILY | RING/U-box | 156 | 210 | - | - | |
Bda07g01364 | 680 | Coils | Coil | 311 | 331 | - | - | |
Bda07g01364 | 680 | PANTHER | RING FINGER 10 FAMILY MEMBER | 27 | 677 | IPR039739 | - | |
Bda07g01364 | 680 | SMART | ring_2 | 157 | 203 | IPR001841 | - | |
Bda07g01364 | 680 | Pfam | Zinc finger, C3HC4 type (RING finger) | 157 | 203 | IPR018957 | GO:0046872 | |
Bda07g01364 | 680 | Coils | Coil | 522 | 542 | - | - | |
Bda07g01364 | 680 | MobiDBLite | consensus disorder prediction | 649 | 680 | - | - | |
Bda07g01364 | 680 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 148 | 250 | IPR013083 | - | |
Bda07g01364 | 680 | CDD | RING-HC_RNF10 | 157 | 204 | - | - | |
Bda07g01364 | 680 | MobiDBLite | consensus disorder prediction | 21 | 73 | - | - | |
Bda07g01364 | 680 | ProSitePatterns | Zinc finger RING-type signature. | 172 | 181 | IPR017907 | - | |
Bda07g01364 | 680 | ProSiteProfiles | Zinc finger RING-type profile. | 157 | 203 | IPR001841 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g01364 | Bda-Chr7:16487716 | Bda07g00997 | Bda-Chr7:11783352 | 4.45E-06 | dispersed | |
Bda07g01364 | Bda-Chr7:16487716 | Bda13g00664 | Bda-Chr13:7562193 | 1.07E-09 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda07g01364 | - | - | jre:109001292 | 761.911 |