Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01384 ATGGAGAATTATCAGGTTTTCTTCCCTTGCTCGTCGAGAACAATGGAAGCTTATCCTCCATTATCCTCAGATAAGGAAAACGTTTACCGTGAAAATTCAGGTGGGTTTTCTTGGTTGGGAGTCGGAGTTCCAGCAAAAGCTTCTTCAGATCAGAGCGGATCGAGCTCTTTCGGGTCGGATGAAAGCGGCGAAAAAGTGGTCAAGAAGAAGGGGGAGAAGAAGATTAGGAGGCCTAAGCATGCTTTTCAGACGAGAAGCCAGGTTGATATACTTGATGATGGTTATCGTTGGAGAAAATATGGTCAGAAGGTAGTGAAGAACAACAAATTTCCCAGGAGCTACTACAAATGCACGCATCAAGGATGCAACGTGAAGAAGCAAGTCCAACGCCTAACTAAAGATGAAGGGGTTGTCGTGACTACCTATGAAGGAGTCCATTCCCATCCCATAGACAAACCCTCTGATAACTTTGAACATATCTTGAGTCAAATGCAAATTTACACATCGCACGTTTAG 516 43.99 MENYQVFFPCSSRTMEAYPPLSSDKENVYRENSGGFSWLGVGVPAKASSDQSGSSSFGSDESGEKVVKKKGEKKIRRPKHAFQTRSQVDILDDGYRWRKYGQKVVKNNKFPRSYYKCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHSHPIDKPSDNFEHILSQMQIYTSHV 171
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16682238 16683237 + Bda026588.1 Bda07g01384 10274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01384 171 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 58 167 IPR044810 GO:0003700
Bda07g01384 171 MobiDBLite consensus disorder prediction 45 81 - -
Bda07g01384 171 SMART WRKY_cls 91 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda07g01384 171 Gene3D WRKY domain 75 151 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda07g01384 171 ProSiteProfiles WRKY domain profile. 86 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda07g01384 171 MobiDBLite consensus disorder prediction 47 61 - -
Bda07g01384 171 SUPERFAMILY WRKY DNA-binding domain 83 150 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda07g01384 171 Pfam WRKY DNA -binding domain 92 149 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda07g01384 171 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 58 167 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01064 Bda07g01384 CCT
Bda01g01064 Bda07g01384 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01064 Bda-Chr1:44875169 Bda07g01384 Bda-Chr7:16682238 1.94E-58 dispersed
Bda07g01384 Bda-Chr7:16682238 Bda11g00335 Bda-Chr11:3759636 5.75E-63 dispersed
Bda07g01384 Bda-Chr7:16682238 Bda05g00405 Bda-Chr5:49364112 3.79E-33 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16176 PF03106 WRKY 1.10E-25 CL0274 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01384 - - qsu:112033440 221.476