Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda07g01384 | ATGGAGAATTATCAGGTTTTCTTCCCTTGCTCGTCGAGAACAATGGAAGCTTATCCTCCATTATCCTCAGATAAGGAAAACGTTTACCGTGAAAATTCAGGTGGGTTTTCTTGGTTGGGAGTCGGAGTTCCAGCAAAAGCTTCTTCAGATCAGAGCGGATCGAGCTCTTTCGGGTCGGATGAAAGCGGCGAAAAAGTGGTCAAGAAGAAGGGGGAGAAGAAGATTAGGAGGCCTAAGCATGCTTTTCAGACGAGAAGCCAGGTTGATATACTTGATGATGGTTATCGTTGGAGAAAATATGGTCAGAAGGTAGTGAAGAACAACAAATTTCCCAGGAGCTACTACAAATGCACGCATCAAGGATGCAACGTGAAGAAGCAAGTCCAACGCCTAACTAAAGATGAAGGGGTTGTCGTGACTACCTATGAAGGAGTCCATTCCCATCCCATAGACAAACCCTCTGATAACTTTGAACATATCTTGAGTCAAATGCAAATTTACACATCGCACGTTTAG | 516 | 43.99 | MENYQVFFPCSSRTMEAYPPLSSDKENVYRENSGGFSWLGVGVPAKASSDQSGSSSFGSDESGEKVVKKKGEKKIRRPKHAFQTRSQVDILDDGYRWRKYGQKVVKNNKFPRSYYKCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHSHPIDKPSDNFEHILSQMQIYTSHV | 171 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 16682238 | 16683237 | + | Bda026588.1 | Bda07g01384 | 10274 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda07g01384 | 171 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 58 | 167 | IPR044810 | GO:0003700 | |
Bda07g01384 | 171 | MobiDBLite | consensus disorder prediction | 45 | 81 | - | - | |
Bda07g01384 | 171 | SMART | WRKY_cls | 91 | 150 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda07g01384 | 171 | Gene3D | WRKY domain | 75 | 151 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda07g01384 | 171 | ProSiteProfiles | WRKY domain profile. | 86 | 151 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda07g01384 | 171 | MobiDBLite | consensus disorder prediction | 47 | 61 | - | - | |
Bda07g01384 | 171 | SUPERFAMILY | WRKY DNA-binding domain | 83 | 150 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda07g01384 | 171 | Pfam | WRKY DNA -binding domain | 92 | 149 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda07g01384 | 171 | PANTHER | WRKY TRANSCRIPTION FACTOR 75-RELATED | 58 | 167 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda01g01064 | Bda07g01384 | CCT | |
Bda01g01064 | Bda07g01384 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g01064 | Bda-Chr1:44875169 | Bda07g01384 | Bda-Chr7:16682238 | 1.94E-58 | dispersed | |
Bda07g01384 | Bda-Chr7:16682238 | Bda11g00335 | Bda-Chr11:3759636 | 5.75E-63 | dispersed | |
Bda07g01384 | Bda-Chr7:16682238 | Bda05g00405 | Bda-Chr5:49364112 | 3.79E-33 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16176 | PF03106 | WRKY | 1.10E-25 | CL0274 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda07g01384 | - | - | qsu:112033440 | 221.476 |