Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01397 ATGGATGAACATCCTGCCATGGATTCTGCAGAGAGGAACATCAGACGTAGCATGGAAGCTGGAGCTCAAGAAGAAGAAGAAGTAGAAGACGGCAAAGACACAGAAAGCATGCCACTGAATCAGCCACTCCTCAAAAGAAACCGAACACTCTCGTCCAGTCCACTCGCCATCATTGGAACCAAAGTTTCCTACATAGAAAGCTTGGATTATGAGATCAACGAGAACGACTTGTTCAAACATGATTGGAGAAGCAGATCCAGAGTTCAAGTACTACAATATATATTCTTGAAATGGACACTAGCTTTCCTCGTCGGACTTCTCACTGGAATCATTGCCTCGGTGATCAATCTTGCCATAGAGAACATTGCCGGATACAAGCTTCTTGCCGTTGTCGGCTTCATAGAAGAGGACAGATATGTAATGGGGTTCGTCTATTTTACCTTAGCAAATTTTCTTCTGACGATGGTTGCTGCCGTGCTGTGCGTGTGCCTTGCACCCACTGCTGCTGGACCTGGAATACCAGAAATCAAAGCTTACCTCAATGGAGTTGACACTCCAAACATGTATGGTGCAACAACATTGATAGTCAAGATAATTGGAAGCATCGGAGCAGTTGCTGCAGGCCTGGATCTTGGAAAAGAAGGACCTTTGGTGCACATCGGTAGCTGCATTGCTTCCTTACTCGGCCAAGGTGGTCCTGATAAATACCGGATAAAATGGGGATGGATTCGCTATTTCAACAATGACCGGGACCGGAGAGATCTCATAACTTGCGGGGCTTCCTCGGGGGTTTGTGCCGCCTTCAGGGCTCCGGTTGGTGGTGTTTTATTTTCACTAGAGGAGGTTGCTACGTGGTGGAGGAGTGCATTGCTGTGGAGAACTTTCTTCAGCACAGCAGTGGTGGTGGTAGTGTTGAGAGCATTCATTGAAATATGCAATTCTGGAGAATGTGGGCTTTTTGGAAAAGGAGGGCTTATTATGTTTGATGTAAACAATGTTTCTCTTAGATATCATGTGATGGACATCATCCCTGCATCTATCATTGGTATCATTGGTGGAGTTCTTGGAAGCCTTTACAACCATCTCCTACACAAGGTTCTAAGACTCTACAATCTCATCAATCAGAAGGGAAAAGTGCATAAGCTCCTTCTCACCATTGCTGTGTCAATCTTCACTTCAGTCTGCCTTTACTGCCTTCCTTTTCTTGCCAAATGCACCCCTTGTGATTCCTCCCTTACTGATTCCACCTGCCCCACAACTGGTCGATCAGGCAATTTCAAACAATTCAACTGCCCAAGTGACCACTACAATGACCTAGCAACTCTACTTCTTACAACAAACGATGATGCTGTGCGAAATATATTCTCGACCAACACTTCCACAGAATATCACCCTTTGTCTCTTTTAATCTTTTTCGCAGTCTATTGCGTCTTGGGATTAATTACCTTTGGCATTGCTGTGCCATCTGGACTTTTTCTCCCAATTATCTTGATGGGATCTGCTTATGGTCGCTTACTAGGCATGGCTATGGGATCTTATACCAACATTGATCAGGGGCTTTATGCTGTTTTGGGTGCAGCCTCACTCATGGCAGGCTCAATGAGAATGACTGTTTCTCTTTGTGTGATATTCCTTGAACTCACCAACAACCTTCTCTTACTACCCATAACAATGATTGTCCTTCTGATTGCAAAAACTGTAGGAGACAGTTTTAACCCAAGCATCTATGAGATAATTCTGCACTTGAAAGGCTTGCCTTTCTTGGAATCCAATCCAGAGCCATGGATGAGAAATATTACTGTCGGGGAGCTTGTTGATGCAAAGCCTGGTGTGATTACTCTGTGCGGCATAGAAAAGGTGGCCCGAATTGTGGATGTTCTAAAGAACACGACACATAATGGTTTCCCTGTAGTGGATGGTGGGGTGGTACTACCTGGGGGAACTGCTGTTGGCGCCACACAACTGCATGGATTAATCCTAAGAACTCACCTGGTTCAGGCACTGAAAAAAAAGTGGTTCTTGAGACAAAAAAGGAGAACTGAAGATTGGGAAGTGAGAGAAAAGTTTACATGGGTTGATTTGGCAGAGAGAGAACTTAAGATTGAGGAAGTAGCTGTGACAAGTGATGAAATGGAGATGTATGTCGATCTTCATCCTCTTACTAACACAACGCCTTACACAGTGGTAGAGAGCATGTCAGTGGCAAAAGCTTTGGTGCTTTTCAGACAAGTAGGTCTACGTCATTTGATTGTCGTACCTAATTATCAAGCAACTGGGGTGCCTCCAGTAGTAGGGATTCTGACCAGGCAAGATTTGACGGCTTACAACATTTTGATGGCCTTCCCCAATATTGCAAGGCCAAAGAGTGAAGGCAAATGA 2379 44.68 MDEHPAMDSAERNIRRSMEAGAQEEEEVEDGKDTESMPLNQPLLKRNRTLSSSPLAIIGTKVSYIESLDYEINENDLFKHDWRSRSRVQVLQYIFLKWTLAFLVGLLTGIIASVINLAIENIAGYKLLAVVGFIEEDRYVMGFVYFTLANFLLTMVAAVLCVCLAPTAAGPGIPEIKAYLNGVDTPNMYGATTLIVKIIGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDKYRIKWGWIRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFSLEEVATWWRSALLWRTFFSTAVVVVVLRAFIEICNSGECGLFGKGGLIMFDVNNVSLRYHVMDIIPASIIGIIGGVLGSLYNHLLHKVLRLYNLINQKGKVHKLLLTIAVSIFTSVCLYCLPFLAKCTPCDSSLTDSTCPTTGRSGNFKQFNCPSDHYNDLATLLLTTNDDAVRNIFSTNTSTEYHPLSLLIFFAVYCVLGLITFGIAVPSGLFLPIILMGSAYGRLLGMAMGSYTNIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSIYEIILHLKGLPFLESNPEPWMRNITVGELVDAKPGVITLCGIEKVARIVDVLKNTTHNGFPVVDGGVVLPGGTAVGATQLHGLILRTHLVQALKKKWFLRQKRRTEDWEVREKFTWVDLAERELKIEEVAVTSDEMEMYVDLHPLTNTTPYTVVESMSVAKALVLFRQVGLRHLIVVPNYQATGVPPVVGILTRQDLTAYNILMAFPNIARPKSEGK 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16769406 16772747 + Bda026601.1 Bda07g01397 10287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01397 792 ProSiteProfiles CBS domain profile. 721 786 IPR000644 -
Bda07g01397 792 SUPERFAMILY Clc chloride channel 75 590 IPR014743 -
Bda07g01397 792 Gene3D - 590 780 IPR046342 -
Bda07g01397 792 Pfam Voltage gated chloride channel 154 568 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bda07g01397 792 SMART cbs_1 724 777 IPR000644 -
Bda07g01397 792 SMART cbs_1 610 669 IPR000644 -
Bda07g01397 792 Coils Coil 7 27 - -
Bda07g01397 792 Gene3D Clc chloride channel 88 589 - -
Bda07g01397 792 PANTHER CHLORIDE CHANNEL PROTEIN CLC-A 31 788 - -
Bda07g01397 792 Pfam CBS domain 723 773 IPR000644 -
Bda07g01397 792 PRINTS Plant CLC chloride channel signature 296 306 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bda07g01397 792 PRINTS Plant CLC chloride channel signature 439 455 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bda07g01397 792 PRINTS Plant CLC chloride channel signature 71 79 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bda07g01397 792 PRINTS Plant CLC chloride channel signature 314 321 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bda07g01397 792 PRINTS Plant CLC chloride channel signature 282 290 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bda07g01397 792 PRINTS Chloride channel signature 166 183 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bda07g01397 792 PRINTS Chloride channel signature 537 556 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bda07g01397 792 PRINTS Chloride channel signature 197 216 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bda07g01397 792 PRINTS Chloride channel signature 261 280 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bda07g01397 792 PRINTS Chloride channel signature 575 589 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bda07g01397 792 PRINTS Chloride channel signature 487 507 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bda07g01397 792 PRINTS Chloride channel signature 519 535 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bda07g01397 792 MobiDBLite consensus disorder prediction 1 22 - -
Bda07g01397 792 CDD CBS_pair_voltage-gated_CLC_euk_bac 608 775 - -
Bda07g01397 792 SUPERFAMILY CBS-domain pair 591 774 IPR046342 -
Bda07g01397 792 MobiDBLite consensus disorder prediction 1 39 - -
Bda07g01397 792 CDD ClC_6_like 66 588 - -
Bda07g01397 792 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 31 788 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01397 Bda-Chr7:16769406 Bda11g00061 Bda-Chr11:731868 0 dispersed
Bda07g01397 Bda-Chr7:16769406 Bda08g00422 Bda-Chr8:4274229 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01397 K05016 - zju:107427939 1300.8