Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda07g01437 | ATGGGTCTGCCATTGGAGAACGAAGAAACAGTGAGAAAGATGGTAGAGAGAGAGAAAGAGCATTTGCCCAGAAATGATTATCTCAGAAGACTTCGAAATGGAGATTTGGATTTGAGCATCAGGAGAGAGGCTCTTGCTTGGATTTGGAAGGCGTCTTCTCAGAACAGTTTTGAACCATTGAGCGTCTGTCTATCTCTAAACTACTTGGATCGATTTCTCTCAGTTCATGAAATCCAAAGAGATAAAAGCTGGGTTGTGCAACTGTTAGCTGTAGCTTGCCTATCTCTCGCAGCAAAAATGGAGGAGACTGAAGTGCCTCATTGTGGTGAAATCCAAGTGGGAGACCCAGAATTTGGGTTTGAATCTAAAACTATTAGAAGAATGGAGCTTTTGATTCTGAATGCTCTGGGATGGAGGATGCAGGCAATAACACCTTGTTCTTATATCGATTACTTTCTGGAGAAGATGATAGATGGTCAACCCCCATCTTTATTTTCCAAATCTAAATCATTGCAACTCATATTAAACACAAGCAAAGGAATTGACTTCTTGGAATTCCGGCCATCGGAGATCGCTGCAGCTGTTGCAAGTTATGTTTCCGGAGAAGTGCATGCAGTCAAGATCGATGATGCTCTGGCTTCTCTTGTTCATATAGAAAAGGTAAAACCAAAAAGAGAAAATACCCTTTTTAAAAATCGAAAAATTAACTTCAAGATATAA | 720 | 40.28 | MGLPLENEETVRKMVEREKEHLPRNDYLRRLRNGDLDLSIRREALAWIWKASSQNSFEPLSVCLSLNYLDRFLSVHEIQRDKSWVVQLLAVACLSLAAKMEETEVPHCGEIQVGDPEFGFESKTIRRMELLILNALGWRMQAITPCSYIDYFLEKMIDGQPPSLFSKSKSLQLILNTSKGIDFLEFRPSEIAAAVASYVSGEVHAVKIDDALASLVHIEKVKPKRENTLFKNRKINFKI | 239 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 26542392 | 26543448 | - | Bda028261.1 | Bda07g01437 | 10327 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda07g01437 | 239 | SUPERFAMILY | Cyclin-like | 8 | 140 | IPR036915 | - | |
| Bda07g01437 | 239 | CDD | CYCLIN | 41 | 133 | IPR013763 | - | |
| Bda07g01437 | 239 | Gene3D | - | 13 | 219 | - | - | |
| Bda07g01437 | 239 | ProSitePatterns | Cyclins signature. | 41 | 72 | IPR006671 | - | |
| Bda07g01437 | 239 | SMART | cyclin_7 | 46 | 134 | IPR013763 | - | |
| Bda07g01437 | 239 | Pfam | Cyclin, C-terminal domain | 143 | 220 | IPR004367 | - | |
| Bda07g01437 | 239 | Pfam | Cyclin, N-terminal domain | 12 | 140 | IPR006671 | - | |
| Bda07g01437 | 239 | Gene3D | - | 24 | 141 | - | - | |
| Bda07g01437 | 239 | PANTHER | CYCLINS | 2 | 216 | IPR039361 | - | |
| Bda07g01437 | 239 | PANTHER | CYCLIN-D4-1-LIKE | 2 | 216 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda07g01437 | Bda-Chr7:26542392 | Bda13g01369 | Bda-Chr13:36271879 | 1.17E-73 | dispersed | |
| Bda14g01328 | Bda-Chr14:14972172 | Bda07g01437 | Bda-Chr7:26542392 | 7.12E-178 | transposed | |
| Bda11g01253 | Bda-Chr11:13122638 | Bda07g01437 | Bda-Chr7:26542392 | 9.50E-40 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda07g01437 | K18810 | - | qsu:111991591 | 297.36 |