Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01445 ATGTGGAATGGACTGCACTTGTTCGAGAATCTGCAGATGGTTAACAAAGCTTTACGCTTGAATTCAACGGCTGGGGGTGAATTCAGCATGCGTTCGATGCATATCAACGAGAATTTCGATTCAGCTCTACTATCTCAACTGAACGAGTCTCAGCTCAATGCAGTTAGGTCCTGCCTTGATGAAATCAACTGTGGGCACAAGTCAGCAATCCAACTTATATGGGGTCCACCTGGGACAGGGAAGACAAAAACTGTCAGTATGCTTCTGGCTCTTCTGTTCCAGATGAAACTTAGGACCCTTGTTTGTGCTCCAACAAATGTCGCCATCGTCGAGGTAGCGACTCGGGTTCTTAAGCTCATGCGAGGAGTTGAAAACGGAAGACAGCCGGATTCTTTTCTATGTCCCTTAGGAGATATTCTTGTCTTTGGGAATAATGAGAGGCTTAAAGTTGGCTCTGATGTTGAAGATATTTATTTGAATAATCGAGTTCAAAAACTTGTGGAGTGTTGTAGTCCTTCTACGGGATGGAGGAATTGCATCACAACCATGATGAATTTTCTTGAAGATTCTGTTGCTCAATATGCTGTTGAAAATCAATTGGTCCTAGAGAGAGAACAGAGAAATAAAAGTGAAGATGTGTTTAATAGCTCCATCAATGGAACTGAAATCAATGCTGGAATACAGAAATCCTTCCTTGAATTTGCAAGAAAAAAATTTGCTCGTATTGCATCGCCACTTAAAGATTGTCTCTCAAAAGTTTGTACGCACTTACCAAAAGATTTCATGTCGGAAAGGAATGTCAGGAAGATCGAAGCCGTTATTTCCCTTCTTGATTCTTTTGAATCTTTGTTGTTTGAAGATCCTGTGGATTCTGATGCATTGGAAGAGAAGTTTTCCCATCCGTTATCCGTCGAAGGTCCATCGCAATCCTCCATCCACCTTCCAGACGAATTGAACGCAAAGAGAAGTGACTGTTTTTCAGTTTTAAAAGATCTTCAATCTTCTCTTAGTGATCTTAAGCTTCCGAGCGGTGTGAACATCAAAGCAAAGGAGTTCTGCTTTCAGAAACCTTCCTTGGTCTTCTGCACTGCCTCAAGCTCTTATAAGTTACATTCTATGAAATTGAAACCATTTGACATTCTGGTCATCGATGAAGCGGCGCAGTTAAAAGAGTGCGAGTCTTGCATTCCCTTACAAATTCCCGGTATTAAGCATGCTGTTTTCATCGGTGACGAGTGCCAATTGCAAGCAATGGTAGAAAGCAGGGAGTTTTCGGTCTTTGTTTGTTTTGTCTTATCATTTGACTTCATATTTTTTGCTCGTAATTTGGATTTTGGCTTAAAGATCCAAAGAATTACCTCTGTTTCTGTGGTTTCATTCATGTTAAAGAGTCGTTTATATATGTATAGGCATTGCCTGTGGATTTTGGGGAGTCAAAGGACCCTTGGAAGAAGCGGATCAGTTTGGGAAGATCTGGTTCTCGATGCTAAAAAAAGACATTGTTTCTTCGATGCTCATAAAAATGAAGTTTTAGCCAAACTGATTCTACAAGTCAAGGAAGAGCTTGATCATCTAGATGATTTGCTTCATGAAAATAGCTTTCTTTTCCGAGAGGCAAAATGGAAGATTTTGTTTAGCGATAAATTTATGAAATCATTCAAAAAGCTGGTATCAAAACAAACAAAGAAGTCTGTGTTGAACCTCCTCATGAAAATTTCTAGTGGATGGAGACCGAAGCGAAGAATTCGAGACTCGGTTTGTGGTAGTTCTTCACAGATTTTGCAGCAATTCAAGGTCAAAAGTTTGTACATTTTATGTGCAGTTGATATTGTGAAAGAATCGACATTTACTCAAGTTATGAAGATATGGGACATATCGCCTTTGGAAAATATCGCAAAGTTGGTCAAGCAGCTTGAAATTATATTTGGATCATACTCGGATGACTACATGAATTGTTGTAGAGAGAGATGTATTGAAGGGAATTTGGAAGTTCCAAGGACGTGGACAGCTTCCAAAGAGATTGTTCGATTTAAGACTTCTAATGACGATGAGTCTGGAAGCAATTCCAGTAGTGTTGCTAGTGATGATAGAAGCTATGTGGAGAATTCAAAGGTTAGTGATAGCTTATTACTAATGAAGTTCTACTCATTATCATTTGGTGTGGTGAGCCATTTGCTCTCGGATCGTGATGATGCCGAGTTGGATCTCCCCTTCGAAGTAACCGACCAAGAGCTTGAGATAATACTTTATCCTAGAAGCACCTTCGTTCTTGGACGGTCAGGGACGGGGAAAACCACTGTTCTAACGATGAAGCTATTTCAAAAAGAAAAACTACATCTAATGGGCAAAAAATTTGTGCATGGAATCAAGGAGCATGAAAGTTTTAACGAAAATGAGGTCGAGGAGAGTTCCTATGGGCCCGAGGACCTCGTATTACGCCAGCTTTTTGTGACAGTGAGTCCTCAATTGTGTTATGCTGTCAAGAAGCATGTTCTTAACTTGAAAAGCTACCTCTCTGGAGGCAGTAATACAGCAGGGAGCAGTAAACTAAATCTTGGAGAGATTGATGAAATAAACGATCAATTTAAGGACGTACCTGATTCATTCATTGATCTTCCGTCCAAGTTTTACCCACTTGTTATATCGTTCCATAAGTTCTTGATGATGCTTGATGGAACTTTGGGAAATTCATTTTTTGGACGATTTCATGACCTGAGAAAACTTTTATGCAAGTCTGGGAGACATTCCAGGTCTGTTGCTATGCAGATGTTTATGAAGACCAGGGAGGTTAACTATGATCGCTTTAGTTCTTCGTACTGGCCCCATTTCAATTCACAGCAAACCAAATTGGTAGATTGTTCGAGGGCCTTCATTGAAATAATTTCCCATATAAAAGGTCACCCGATGACCACTGAAGCAGGCACTGGTAAACTCTTCAGGGAGGATTATGTTGCTCTGTCAGATAGCCGGGCATCAAGTTTAAGCAAGCCAATGAGGGAGAATATATATGATATTTACCAAACTTATGAAAGAATGAAGACTGAAAATGGGGATTTTGATTTGGCTGATCTTGTGATGGATCTTCATCGTCGTCTACGAGATCAACAATATGGTGGTGATCGAATGGACTTTGTTTATATCGATGAAGTCCAAGACTTGACGATGGGCCAAATCGCTCTTTTCAAATATGTATGCCACAATGTCGAGGAAGGTTTTATTTTTTCTGGTGATACGGCACAGACAATTGCAAGGGGAATTGATTTTCGATTCCAAGACATAAAAAGTTTGTTTTATAATCATTTCGTGCTAGGCAGCGAGATGCAGAAAAGAAACCAGAAAGGACAGATTTCTGAGATTTTTCAGTTGAGCCAAAATTTTCGTACCCATGCGGGGATATTGAATTTATCGCATAGTATAATAGAACTTCTTTATCACTTTTTTTCTAATTCTATCGACATTTTGAGACCGGAGACAAGCCGTATCAATGGAGAATCTCCTGTTTTACTTAAATCTGAGGACAGTAACAATGCAATAATCAAGATTTTTGGCAACAACTCCAGTAATGTTCAAAATATTGTCGAATTTGGAGCAGAGCAAGTGATCTTGGTCCGTGATGAATCTGTGCGAAAGGAGATTCTTAATTACGTTGGGGAGCAAGCTCTAGTACTTACAATACTAGAATGTAAAGGACTAGAGTTCCAGGATGTGTTATTGTACAACTTTTTTGGTTCATCGCCTCTGAAAAATCAATGGAGGGTGATATATAATTTCATGGAAGAACAAGGACTGCTTGAAAACTTTACAGCTAAGTTTCCAAGCTTCAAGGAGTCAAAGCACAATATCATGTGTTCTGAGCTGAAGCAACTGTATGTCGCTGTTACTCGAACCAGGCAGCGGCTCTGGTTTTGTGAGAACGAAAATAAGCAATCGGAGCCATCGTCTTTCTGGCAGCTTTATAATGAGCATAACTATGAAATGGCCACTAGATGCTTTGAAAAAGCGAGAGACACATATTGGGAAAGAAGGTCAAGGGCTTCGGGCCTCAAAGCTAGAGCTGACAGCATCCGCCGTGCAAATCATGAAGAGGCTGATGCTATTCTCAGAGAAGCTGCAGAAATTTTCGATGCCATAGGAAAGGCTGATTGTGCTGCACAATGTTATTTTGAGTTAAGAGATTTTGAGAAAGCGGGAACAATCTTTCTGGAAAAATTTGGTGAATCTGAACTTTATAAAGCAGGGGAGTGTTTTGCTTTGGCTGGATGGTTTGAACGTGCGGCAGAAATTTATGCAAAAGGCAACTTTTTGTTGGAGTGCTTGGGTGTTTGCTCGAAAGGAAACCTGTTCGACATGGGTTTGCAGTACATCGATTGCTGGAAAAATGAAGCCCTGCAAGAGTCTTGTGTAAATGAAAAAGATGAAAGATTAGAGCAAATGGTACAAGAGTTTCTAGAAAGTTGTGCTCTTCATTACCACAAAAGTGGAGATGACAGGTCTATGATGAAATTTATCAATGCTTTTCATTCAACCGATCTGATGCGTAATTTCTTGAAATCCCTAGATTGCCTCGACGAGCTTCTTCTTTTAGAAGAAGAAACCGGAAACTTTCTGCAAGCTGCGTGCATTGCGAAAAAGAAAGGCGATATAATCGGCCAAGCTTATCTTCTCGGGAAAGCTGCAAAATTTGAGGATGCATCAGTACTTATTCTTCAATTTGTACTTGCAAACTCTCTTTGGTCATCTGGAAGCAAAGGCTGGCCCTTGAAGGAGTTTTCTGAAAAAGAAGAACTATTGGAAAATGCCAAATCTTTTGCCAAAAATGTTTCAAGCAACTTTTACGAGTATGTATGCATAGAAGCTGATATTCTATTGAGCAAGGAGAAAAACTTTATCAGCATGAAGGATTGGTTTTTCTTTTTTCACAGAGACAAGAATGTTGAAGGTGAAATGTTAGCCGTGCGAAAAATACTCGACTTCCAGTTGGGTTGCAATGCTTCCGAGTATACTTGGGAAGACAAGTTCATTTCTGATCCCATTTTGCATTCAGAGAAGATTTCTATGGAAACAATGGTTTTCTTTTGGGAATGTTGGAGGAATAATACTTTGAAGATATTTGATTGTCTTGGAAGGCTCACGACCGATGGAGTCGATGAGTATGGCAAGTTTTGTTTGAGTTTCTTGGGCGTTTCAAGGGAAGTTTACAACCAAAATGACATCTATTTACTCCTCAATTCTGATGCTTATTGGGTCCGAGATGTAGGTGGAAAATCTGTTCAAAAGAATAGCAAGTTGGTTTCCCTTGATGTTTGCTACTTAATCTCCTCGGCCCGTAATTATTGGCGTTCAGAAATGCTCGATCTCGGCCTGAAGGTTTTGAAAACTCTTGAAAACCTTTATCACTTATCCACCAAAAACTCACTTTCATTGTTTATTCAGAGCAGATCACTAATTCTTATTTTTGAAGTCGCAAAATTTCTTTTGGAGACGAAGCATCTTGACCGCTCCCATAAGGAGTCACAGACACTGCGAAATTACGTTGAACTTGCAAACGATATCTTTGTCACCAACGTGTTTCCTCTTGACTCGAACATGTCATTGGATATGATTTCCTTGAGAAGTACACCTGTTGCAGGGGAATTACTTCAGAGAAACATAGCCAAAAACACAAGCTCAATTAACAGCCTGAGTCATGGCCAAATTGGAAGGGTAGCGATGATAATTCTTGGATCGGCTAAGCTAAGCAACCAACCCTTTGAAAGCATTGCGAAATGGTCGGATGAAAGTCAGCCATGGAAGCTATTCTTCCAACATCTGAGAGAGGTAGAGAATCAGCCTGATATTTCTCTTGTTTTGAGCTTTCATCAGGCTTTGAATGAAACATATAGAGCAAATTGGGTAAAAGAAAGGGACTATATAACACCCTTCTGTTTCCTCTATCTTCTTGAGAGGATTTTGATCATGGCTTCTTCCTGTAATGGTTACTTTATTACCACGAAGACCTCTTTTGTAGAGTGGCTTACTTACTACAGAGGAGATTATAAACAGAGTTGCAATCTACCACTGGATCTCAACTATTATTTGGAAGCAACTATTAGATTTTTGGTCAATGTTTCTCGAGAATGCCTCGTCAATAAAGAACAGATGATGGATTGGCTCAACAAATCCAGAATTAAGGCGAAAGAATACTACCCGACACTGGTGCTGAGATTTTTTATTATCATCTGCTTGCTTCATGTGAACTTTGGTGTTAGATTAGATCTACTATATGATTTACTGGGTAAGAATTATATCACTAATCACTTGCCACTGGAGTTTTGTAATACTTTACGGAGAAGAAGAAGGGATAATATTTTAAACAACTTTGCTGAAGCTTTCCGAAAGACTAGCAATCCAATGGTGATTGTTAATGTTGGGGAAAAACGTCGCGTATTTATTTGCCAAGATGCAATTTCTGTCGATATGAGAGACGTTCGTACCATGGAAGATGTTTTGCAGATATTATTTCCAAAGATCGCTGAAGATGGAGAGAAAACAATTGTCTTGAATCCTTCCAGTGGATCATCTTCCCGAGAAGATTATGGTCCTAAACAGGTTTCAGGTGTACCGGAGAAAAAATTGTCGACTTCTGCATTGACTGTGCATCGTGAAGAAGGTGATCAAACAAATTCTGCATCAAATGTTGATGCAATCAAGGTTCGCCAATTGACTTTCTAG 6711 39.65 MWNGLHLFENLQMVNKALRLNSTAGGEFSMRSMHINENFDSALLSQLNESQLNAVRSCLDEINCGHKSAIQLIWGPPGTGKTKTVSMLLALLFQMKLRTLVCAPTNVAIVEVATRVLKLMRGVENGRQPDSFLCPLGDILVFGNNERLKVGSDVEDIYLNNRVQKLVECCSPSTGWRNCITTMMNFLEDSVAQYAVENQLVLEREQRNKSEDVFNSSINGTEINAGIQKSFLEFARKKFARIASPLKDCLSKVCTHLPKDFMSERNVRKIEAVISLLDSFESLLFEDPVDSDALEEKFSHPLSVEGPSQSSIHLPDELNAKRSDCFSVLKDLQSSLSDLKLPSGVNIKAKEFCFQKPSLVFCTASSSYKLHSMKLKPFDILVIDEAAQLKECESCIPLQIPGIKHAVFIGDECQLQAMVESREFSVFVCFVLSFDFIFFARNLDFGLKIQRITSVSVVSFMLKSRLYMYRHCLWILGSQRTLGRSGSVWEDLVLDAKKRHCFFDAHKNEVLAKLILQVKEELDHLDDLLHENSFLFREAKWKILFSDKFMKSFKKLVSKQTKKSVLNLLMKISSGWRPKRRIRDSVCGSSSQILQQFKVKSLYILCAVDIVKESTFTQVMKIWDISPLENIAKLVKQLEIIFGSYSDDYMNCCRERCIEGNLEVPRTWTASKEIVRFKTSNDDESGSNSSSVASDDRSYVENSKVSDSLLLMKFYSLSFGVVSHLLSDRDDAELDLPFEVTDQELEIILYPRSTFVLGRSGTGKTTVLTMKLFQKEKLHLMGKKFVHGIKEHESFNENEVEESSYGPEDLVLRQLFVTVSPQLCYAVKKHVLNLKSYLSGGSNTAGSSKLNLGEIDEINDQFKDVPDSFIDLPSKFYPLVISFHKFLMMLDGTLGNSFFGRFHDLRKLLCKSGRHSRSVAMQMFMKTREVNYDRFSSSYWPHFNSQQTKLVDCSRAFIEIISHIKGHPMTTEAGTGKLFREDYVALSDSRASSLSKPMRENIYDIYQTYERMKTENGDFDLADLVMDLHRRLRDQQYGGDRMDFVYIDEVQDLTMGQIALFKYVCHNVEEGFIFSGDTAQTIARGIDFRFQDIKSLFYNHFVLGSEMQKRNQKGQISEIFQLSQNFRTHAGILNLSHSIIELLYHFFSNSIDILRPETSRINGESPVLLKSEDSNNAIIKIFGNNSSNVQNIVEFGAEQVILVRDESVRKEILNYVGEQALVLTILECKGLEFQDVLLYNFFGSSPLKNQWRVIYNFMEEQGLLENFTAKFPSFKESKHNIMCSELKQLYVAVTRTRQRLWFCENENKQSEPSSFWQLYNEHNYEMATRCFEKARDTYWERRSRASGLKARADSIRRANHEEADAILREAAEIFDAIGKADCAAQCYFELRDFEKAGTIFLEKFGESELYKAGECFALAGWFERAAEIYAKGNFLLECLGVCSKGNLFDMGLQYIDCWKNEALQESCVNEKDERLEQMVQEFLESCALHYHKSGDDRSMMKFINAFHSTDLMRNFLKSLDCLDELLLLEEETGNFLQAACIAKKKGDIIGQAYLLGKAAKFEDASVLILQFVLANSLWSSGSKGWPLKEFSEKEELLENAKSFAKNVSSNFYEYVCIEADILLSKEKNFISMKDWFFFFHRDKNVEGEMLAVRKILDFQLGCNASEYTWEDKFISDPILHSEKISMETMVFFWECWRNNTLKIFDCLGRLTTDGVDEYGKFCLSFLGVSREVYNQNDIYLLLNSDAYWVRDVGGKSVQKNSKLVSLDVCYLISSARNYWRSEMLDLGLKVLKTLENLYHLSTKNSLSLFIQSRSLILIFEVAKFLLETKHLDRSHKESQTLRNYVELANDIFVTNVFPLDSNMSLDMISLRSTPVAGELLQRNIAKNTSSINSLSHGQIGRVAMIILGSAKLSNQPFESIAKWSDESQPWKLFFQHLREVENQPDISLVLSFHQALNETYRANWVKERDYITPFCFLYLLERILIMASSCNGYFITTKTSFVEWLTYYRGDYKQSCNLPLDLNYYLEATIRFLVNVSRECLVNKEQMMDWLNKSRIKAKEYYPTLVLRFFIIICLLHVNFGVRLDLLYDLLGKNYITNHLPLEFCNTLRRRRRDNILNNFAEAFRKTSNPMVIVNVGEKRRVFICQDAISVDMRDVRTMEDVLQILFPKIAEDGEKTIVLNPSSGSSSREDYGPKQVSGVPEKKLSTSALTVHREEGDQTNSASNVDAIKVRQLTF 2236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26853915 26862117 - Bda028272.1 Bda07g01445 10335

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01445 2236 MobiDBLite consensus disorder prediction 2179 2223 - -
Bda07g01445 2236 Gene3D - 5 431 IPR027417 -
Bda07g01445 2236 Gene3D - 1123 1332 IPR027417 -
Bda07g01445 2236 Gene3D - 1022 1082 IPR027417 -
Bda07g01445 2236 Pfam AAA domain 46 421 IPR041677 GO:0004386
Bda07g01445 2236 MobiDBLite consensus disorder prediction 2179 2193 - -
Bda07g01445 2236 Pfam UvrD/REP helicase N-terminal domain 990 1082 IPR014016 GO:0005524
Bda07g01445 2236 Gene3D - 986 1021 IPR013986 -
Bda07g01445 2236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 426 IPR027417 -
Bda07g01445 2236 PANTHER MAMMARY TURMOR VIRUS RECEPTOR HOMOLOG 1, 2 MTVR1, 2 469 2201 IPR039904 -
Bda07g01445 2236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 741 1321 IPR027417 -
Bda07g01445 2236 ProSiteProfiles UvrD-like DNA helicase ATP-binding domain profile. 737 1129 IPR014016 GO:0005524
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01445 - - - cit:102616950 1803.88
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01445 Bda-Chr7:26853915 Bda14g01073 Bda-Chr14:9318215 0 dispersed
Bda07g01444 Bda-Chr7:26807246 Bda07g01445 Bda-Chr7:26853915 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1083 . . . . . . . . . . . . . . . . . Bhi07g00157 . . Lac13g1696 . . . . . . . . . . Cone13ag0671 Cone19ag0665 . . . . Chy10g00088 Cme10g01138 . . Bda07g01445 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa05g00953 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003082 5 0 2 1 1 1 2 1 1 0 1 1 3 1 1 2 2 2 1 1 2 2 4 4 2 1 0 4 1 2 51