Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01460 ATGGCGTTTTTCCCAGCAAACTTTTTCTTACGTACTTCTCAAGAAGATGCACACCAACCTCCCACCATTAATGGAGTTCTTCCTTCATGCGCACCTCAAGATTTTCATGGAGTTGCAGTACCGTTTGTAGGGAAGAGATGTAGGCCATTTTCCGGAGTGGATTTGGTCGGGGAAGAAAGCAACAATGGGGACGACGATCTGTCCGACGATGGATCACAAATGGGGGAGAAGAAGAAGAGGCTGAATATGGAGCAAGTGAAGACACTCGAGAAGAATTTTGAGTTGGGAAACAAGCTAGAGCCTGAGAGAAAACTGCAGTTGGCTAGGGTTCTTGGTCTGCAACCCAGACAGATTGCAATCTGGTTTCAGAACAGAAGAGCAAGGTGGAAGACGAAGCAGCTGGAGAAAGACTATGATCTTCTTAAACGACAGTTTGAAGCCATTAAAGCAGATAATGAGACTCTTCAAGCCAGGAACAAAAAGCTTAAAGATGAGATGATGGCTTTGAAAGGTAGAAAGCCAACAGAATCTATCAATCTCAACAAAGAAACAGAAGGATCTTGTAGTAATAGAAGTGAGAACAGCTCTGATATTAGGCTGGATATCTCCATGACACCACCCATTGACAGCCCTTCTTTCCGACCTTTATTTCCATCGTCTTCTTCGAAGCCCCCTCCGGCCATGGCCCACCTCTTCGGAACCTCCTCGAGACCGGATGATCACCTCCAATGGCAGAAAATCGATCAGATGGTTAAAGAAGAAAGCTTAGGCAATATGTTTTGTGGAATTGAAGATCAGTCTGGGTTTTGGCCATTGTTGGAGCAGCAACAATTTAATGGATGA 843 44.84 MAFFPANFFLRTSQEDAHQPPTINGVLPSCAPQDFHGVAVPFVGKRCRPFSGVDLVGEESNNGDDDLSDDGSQMGEKKKRLNMEQVKTLEKNFELGNKLEPERKLQLARVLGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAIKADNETLQARNKKLKDEMMALKGRKPTESINLNKETEGSCSNRSENSSDIRLDISMTPPIDSPSFRPLFPSSSSKPPPAMAHLFGTSSRPDDHLQWQKIDQMVKEESLGNMFCGIEDQSGFWPLLEQQQFNG 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 27137122 27145819 - Bda028292.1 Bda07g01460 10350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01460 280 MobiDBLite consensus disorder prediction 55 78 - -
Bda07g01460 280 Gene3D - 69 138 - -
Bda07g01460 280 MobiDBLite consensus disorder prediction 172 198 - -
Bda07g01460 280 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13 1 279 - -
Bda07g01460 280 Coils Coil 124 172 - -
Bda07g01460 280 SUPERFAMILY Homeodomain-like 64 134 IPR009057 -
Bda07g01460 280 Pfam Homeobox associated leucine zipper 132 173 IPR003106 GO:0006355|GO:0043565
Bda07g01460 280 PRINTS Lambda-repressor HTH signature 112 128 IPR000047 GO:0003677
Bda07g01460 280 PRINTS Lambda-repressor HTH signature 103 112 IPR000047 GO:0003677
Bda07g01460 280 ProSiteProfiles 'Homeobox' domain profile. 72 132 IPR001356 GO:0003677
Bda07g01460 280 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 279 IPR045224 GO:0003700
Bda07g01460 280 SMART HOX_1 75 136 IPR001356 GO:0003677
Bda07g01460 280 CDD homeodomain 77 133 IPR001356 GO:0003677
Bda07g01460 280 Pfam Homeodomain 77 130 IPR001356 GO:0003677
Bda07g01460 280 MobiDBLite consensus disorder prediction 180 198 - -
Bda07g01460 280 ProSitePatterns 'Homeobox' domain signature. 107 130 IPR017970 GO:0000981|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g02167 Bda07g01460 CCT
Bda07g01460 Bda11g01227 CCT
Bda01g02167 Bda07g01460 ECH
Bda07g01460 Bda11g01227 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01460 Bda-Chr7:27137122 Bda10g00072 Bda-Chr10:1578941 1.09E-38 dispersed
Bda01g02167 Bda-Chr1:57581698 Bda07g01460 Bda-Chr7:27137122 2.23E-126 wgd
Bda11g01227 Bda-Chr11:12694178 Bda07g01460 Bda-Chr7:27137122 1.20E-123 wgd
Bda14g00838 Bda-Chr14:6445781 Bda07g01460 Bda-Chr7:27137122 9.54E-35 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16183 PF00046 Homeodomain 9.30E-15 CL0123 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01460 K09338 - rcu:8286990 395.586