Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda07g01460 | ATGGCGTTTTTCCCAGCAAACTTTTTCTTACGTACTTCTCAAGAAGATGCACACCAACCTCCCACCATTAATGGAGTTCTTCCTTCATGCGCACCTCAAGATTTTCATGGAGTTGCAGTACCGTTTGTAGGGAAGAGATGTAGGCCATTTTCCGGAGTGGATTTGGTCGGGGAAGAAAGCAACAATGGGGACGACGATCTGTCCGACGATGGATCACAAATGGGGGAGAAGAAGAAGAGGCTGAATATGGAGCAAGTGAAGACACTCGAGAAGAATTTTGAGTTGGGAAACAAGCTAGAGCCTGAGAGAAAACTGCAGTTGGCTAGGGTTCTTGGTCTGCAACCCAGACAGATTGCAATCTGGTTTCAGAACAGAAGAGCAAGGTGGAAGACGAAGCAGCTGGAGAAAGACTATGATCTTCTTAAACGACAGTTTGAAGCCATTAAAGCAGATAATGAGACTCTTCAAGCCAGGAACAAAAAGCTTAAAGATGAGATGATGGCTTTGAAAGGTAGAAAGCCAACAGAATCTATCAATCTCAACAAAGAAACAGAAGGATCTTGTAGTAATAGAAGTGAGAACAGCTCTGATATTAGGCTGGATATCTCCATGACACCACCCATTGACAGCCCTTCTTTCCGACCTTTATTTCCATCGTCTTCTTCGAAGCCCCCTCCGGCCATGGCCCACCTCTTCGGAACCTCCTCGAGACCGGATGATCACCTCCAATGGCAGAAAATCGATCAGATGGTTAAAGAAGAAAGCTTAGGCAATATGTTTTGTGGAATTGAAGATCAGTCTGGGTTTTGGCCATTGTTGGAGCAGCAACAATTTAATGGATGA | 843 | 44.84 | MAFFPANFFLRTSQEDAHQPPTINGVLPSCAPQDFHGVAVPFVGKRCRPFSGVDLVGEESNNGDDDLSDDGSQMGEKKKRLNMEQVKTLEKNFELGNKLEPERKLQLARVLGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAIKADNETLQARNKKLKDEMMALKGRKPTESINLNKETEGSCSNRSENSSDIRLDISMTPPIDSPSFRPLFPSSSSKPPPAMAHLFGTSSRPDDHLQWQKIDQMVKEESLGNMFCGIEDQSGFWPLLEQQQFNG | 280 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 27137122 | 27145819 | - | Bda028292.1 | Bda07g01460 | 10350 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda07g01460 | 280 | MobiDBLite | consensus disorder prediction | 55 | 78 | - | - | |
Bda07g01460 | 280 | Gene3D | - | 69 | 138 | - | - | |
Bda07g01460 | 280 | MobiDBLite | consensus disorder prediction | 172 | 198 | - | - | |
Bda07g01460 | 280 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13 | 1 | 279 | - | - | |
Bda07g01460 | 280 | Coils | Coil | 124 | 172 | - | - | |
Bda07g01460 | 280 | SUPERFAMILY | Homeodomain-like | 64 | 134 | IPR009057 | - | |
Bda07g01460 | 280 | Pfam | Homeobox associated leucine zipper | 132 | 173 | IPR003106 | GO:0006355|GO:0043565 | |
Bda07g01460 | 280 | PRINTS | Lambda-repressor HTH signature | 112 | 128 | IPR000047 | GO:0003677 | |
Bda07g01460 | 280 | PRINTS | Lambda-repressor HTH signature | 103 | 112 | IPR000047 | GO:0003677 | |
Bda07g01460 | 280 | ProSiteProfiles | 'Homeobox' domain profile. | 72 | 132 | IPR001356 | GO:0003677 | |
Bda07g01460 | 280 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN | 1 | 279 | IPR045224 | GO:0003700 | |
Bda07g01460 | 280 | SMART | HOX_1 | 75 | 136 | IPR001356 | GO:0003677 | |
Bda07g01460 | 280 | CDD | homeodomain | 77 | 133 | IPR001356 | GO:0003677 | |
Bda07g01460 | 280 | Pfam | Homeodomain | 77 | 130 | IPR001356 | GO:0003677 | |
Bda07g01460 | 280 | MobiDBLite | consensus disorder prediction | 180 | 198 | - | - | |
Bda07g01460 | 280 | ProSitePatterns | 'Homeobox' domain signature. | 107 | 130 | IPR017970 | GO:0000981|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda01g02167 | Bda07g01460 | CCT | |
Bda07g01460 | Bda11g01227 | CCT | |
Bda01g02167 | Bda07g01460 | ECH | |
Bda07g01460 | Bda11g01227 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g01460 | Bda-Chr7:27137122 | Bda10g00072 | Bda-Chr10:1578941 | 1.09E-38 | dispersed | |
Bda01g02167 | Bda-Chr1:57581698 | Bda07g01460 | Bda-Chr7:27137122 | 2.23E-126 | wgd | |
Bda11g01227 | Bda-Chr11:12694178 | Bda07g01460 | Bda-Chr7:27137122 | 1.20E-123 | wgd | |
Bda14g00838 | Bda-Chr14:6445781 | Bda07g01460 | Bda-Chr7:27137122 | 9.54E-35 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16183 | PF00046 | Homeodomain | 9.30E-15 | CL0123 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda07g01460 | K09338 | - | rcu:8286990 | 395.586 |