Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda07g01466 | ATGGCTTCCGAACCACAAGTTTCTGAAATTTCTGCTCTGTTCGAGAGGTTGATGAGTAACAGAGATCTTTCCATGTTCTTACCCTTTCTACTCGGATTCAATCAAGAAAACCCAGATCCAGAAAATGAAAACAGATCGAACCCTAGAGATAGAATCATCATCATCAATCCTTCTACTCAAGGTATGGTGGTGATTGAAGGTGCTTCTACCTTCGAATCCCTGCTTCGAGAATTGCGTAGCAAAAACGGTCAACCCCCTGCGTCAAAAGCGTCCATCGAAGCGATGCCAACTGAAGAAATACGAGAAGAGGGCGAGTGTACTATTTGCTTAGATGAGTTTGAAATCGGTAGTCGGGTGAAAAAAATGCCGTGTAACCATAAATTTCATGGTGATTGTATAAAAACGTGGCTAGAATTGCACGGGTCCTGCCCGATTTGTCGGTTTTTGTTGCCTGCTGATGAAGATGACGTTGGGAAGAAGAGTGATAGGGAGATTTGGGTCAGTTTTTCTTTCAATGGCGGAGGGAGAAATGGGGATTCGAACCACAGTTCTTCCAATGAGTTCGATCGTTCTTCCTCGGGATCTGAGGAACTGGAAGGCTTCCATCAGAAATGGTGCTTCCACTTCTCTTCACTCCAATGGCATGATTTTTCAACCCATCCCATTCATTTTCAGCTCGATGAATGTCTAGTGATGAAAACTCAACACTACTTTCTGCCGATTTTCGAGGATAGCCCTGTTGCTTCTCTTCTTCGATTCCAGAAATTTCCGATAATTCAAAAGAGCTTGCCATTGAAATTGTTCTCATTTTATTATTTTCATCATTATTGGAGTCCAATCCTGCAGTCTCTGCAGGTTTTGTGA | 864 | 42.82 | MASEPQVSEISALFERLMSNRDLSMFLPFLLGFNQENPDPENENRSNPRDRIIIINPSTQGMVVIEGASTFESLLRELRSKNGQPPASKASIEAMPTEEIREEGECTICLDEFEIGSRVKKMPCNHKFHGDCIKTWLELHGSCPICRFLLPADEDDVGKKSDREIWVSFSFNGGGRNGDSNHSSSNEFDRSSSGSEELEGFHQKWCFHFSSLQWHDFSTHPIHFQLDECLVMKTQHYFLPIFEDSPVASLLRFQKFPIIQKSLPLKLFSFYYFHHYWSPILQSLQVL | 287 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 27327867 | 27329208 | - | Bda028302.1 | Bda07g01466 | 10356 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda07g01466 | 287 | ProSiteProfiles | Zinc finger RING-type profile. | 106 | 147 | IPR001841 | - | |
Bda07g01466 | 287 | PANTHER | - | 8 | 162 | - | - | |
Bda07g01466 | 287 | SUPERFAMILY | RING/U-box | 95 | 153 | - | - | |
Bda07g01466 | 287 | SMART | ring_2 | 106 | 146 | IPR001841 | - | |
Bda07g01466 | 287 | Pfam | Ring finger domain | 105 | 147 | IPR001841 | - | |
Bda07g01466 | 287 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 74 | 152 | IPR013083 | - | |
Bda07g01466 | 287 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 8 | 162 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g00265 | Bda-Chr1:27207409 | Bda07g01466 | Bda-Chr7:27327867 | 3.33E-16 | dispersed | |
Bda07g01466 | Bda-Chr7:27327867 | Bda10g01064 | Bda-Chr10:44663236 | 1.88E-90 | dispersed | |
Bda07g01466 | Bda-Chr7:27327867 | Bda02g00580 | Bda-Chr2:46671597 | 1.42E-25 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda07g01466 | - | - | zju:107429014 | 250.366 |