Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda07g01473 ATGGATCTCACTGTGTTTTTGGTGGTGGGTTTTCTATCATTCGTCTCCTCCGTCAAAGCGTATGGCGAAGGAGGGTGGAACAGTGGCCGTGCGACCTTTTACGGAGGTGGAGATGCTTCTGGTACAATGGGTGGGGCTTGTGGGTATGGAAACCTATACAGCCAAGGGTACGGGACGGACACTGCAGCGCTGAGCACGGCTCTGTTCAACGAAGGTCTGAGTTGCGGTTCGTGCTACGAGATCCGATGCGTAAACGCTGGGCAGTCGTGCCTGCCGGGATCGATAGTGGTCACGGCCACCAACTTCTGCCCACCGAACAGCAATGGCGGATGGTGCGACCCTCCTCAGCCGCACTTCGATCTCTCTCAGCCTGTTTTTCAGCACATTGCTCAATATAGAGCTGGAGTTGTGCCTGTGGCCTATAGAAGGGTGCCATGCAGGAAGAAGGGAGGAATAAGGTTCACAATCAATGGACATTCCTTCTTCAACCTAGTTCTGATCACCAACGTAGGCGGCGCCGGCGACGTCCATGCAGTTTCCATCAAAGGCTCGAGAACCGGGTGGCAAACGATGTCCAGAAACTGGGGCCAGAACTGGCAGAGCAACTCCTACCTCAACGGCCAAAGCTTGTCCTTCAAGGTCACCACCAGCGACGGCCAAACCGTCATCTCAAACAACGTCGCTCCGGCTGGCTGGTCCTTCGGCCAGACGTACAGTGGTGCGCAATTCTAG 732 55.46 MDLTVFLVVGFLSFVSSVKAYGEGGWNSGRATFYGGGDASGTMGGACGYGNLYSQGYGTDTAALSTALFNEGLSCGSCYEIRCVNAGQSCLPGSIVVTATNFCPPNSNGGWCDPPQPHFDLSQPVFQHIAQYRAGVVPVAYRRVPCRKKGGIRFTINGHSFFNLVLITNVGGAGDVHAVSIKGSRTGWQTMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQTVISNNVAPAGWSFGQTYSGAQF 243
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 27452304 27453232 - Bda028310.1 Bda07g01473 10363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda07g01473 243 PRINTS Expansin/Lol pI family signature 65 83 IPR007118 GO:0005576
Bda07g01473 243 PRINTS Expansin/Lol pI family signature 134 150 IPR007118 GO:0005576
Bda07g01473 243 PRINTS Expansin/Lol pI family signature 188 202 IPR007118 GO:0005576
Bda07g01473 243 PRINTS Expansin/Lol pI family signature 43 61 IPR007118 GO:0005576
Bda07g01473 243 PRINTS Expansin/Lol pI family signature 226 240 IPR007118 GO:0005576
Bda07g01473 243 PRINTS Expansin/Lol pI family signature 25 40 IPR007118 GO:0005576
Bda07g01473 243 PANTHER EXPANSIN 6 243 - -
Bda07g01473 243 Pfam Expansin C-terminal domain 152 229 IPR007117 -
Bda07g01473 243 Gene3D - 12 147 IPR036908 -
Bda07g01473 243 Gene3D - 151 243 IPR036749 -
Bda07g01473 243 SMART dpbb_1 61 141 IPR007112 -
Bda07g01473 243 Pfam Lytic transglycolase 61 141 IPR009009 -
Bda07g01473 243 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 161 240 IPR007117 -
Bda07g01473 243 SUPERFAMILY Barwin-like endoglucanases 8 169 IPR036908 -
Bda07g01473 243 PRINTS Expansin signature 162 183 IPR002963 GO:0009664
Bda07g01473 243 PRINTS Expansin signature 109 126 IPR002963 GO:0009664
Bda07g01473 243 PRINTS Expansin signature 126 139 IPR002963 GO:0009664
Bda07g01473 243 PRINTS Expansin signature 83 94 IPR002963 GO:0009664
Bda07g01473 243 PRINTS Expansin signature 197 218 IPR002963 GO:0009664
Bda07g01473 243 PRINTS Expansin signature 226 242 IPR002963 GO:0009664
Bda07g01473 243 PRINTS Expansin signature 56 70 IPR002963 GO:0009664
Bda07g01473 243 PRINTS Expansin signature 95 105 IPR002963 GO:0009664
Bda07g01473 243 PRINTS Expansin signature 150 162 IPR002963 GO:0009664
Bda07g01473 243 PANTHER EXPANSIN-A15 6 243 IPR002963 GO:0009664
Bda07g01473 243 SUPERFAMILY PHL pollen allergen 148 239 IPR036749 -
Bda07g01473 243 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 44 151 IPR007112 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda07g01473 Bda11g01211 CCT
Bda07g01473 Bda11g01211 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01473 Bda-Chr7:27452304 Bda12g00165 Bda-Chr12:1575057 4.24E-140 dispersed
Bda10g01067 Bda-Chr10:44677129 Bda07g01473 Bda-Chr7:27452304 8.19E-153 wgd
Bda11g01211 Bda-Chr11:12476870 Bda07g01473 Bda-Chr7:27452304 1.25E-143 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda07g01473 - - rcu:8281825 426.402